EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPPRG00000018110 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Panthera_pardus
Status: putative
Strand: Plus strand
Length: 4102 bases
Position: chrKV860283.1:22299616-22303717
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPPRP00000026951	RRM_1	PF00076.22	1.3e-36	1	2
ENSPPRP00000026951	RRM_1	PF00076.22	1.3e-36	2	2
ENSPPRP00000026926	RRM_1	PF00076.22	1.6e-36	1	2
ENSPPRP00000026926	RRM_1	PF00076.22	1.6e-36	2	2
ENSPPRP00000026963	RRM_1	PF00076.22	1.8e-36	1	2
ENSPPRP00000026963	RRM_1	PF00076.22	1.8e-36	2	2
ENSPPRP00000026936	RRM_1	PF00076.22	1.9e-36	1	2
ENSPPRP00000026936	RRM_1	PF00076.22	1.9e-36	2	2
ENSPPRP00000026951	HnRNPA1	PF11627.8	1.9e-19	1	1
ENSPPRP00000026926	HnRNPA1	PF11627.8	2.1e-19	1	1
ENSPPRP00000026963	HnRNPA1	PF11627.8	2.2e-19	1	1
ENSPPRP00000026936	HnRNPA1	PF11627.8	2.4e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPPRT00000027426	-	918	-	ENSPPRP00000026963	305 (aa)	-	-
ENSPPRT00000027357	-	882	-	ENSPPRP00000026926	293 (aa)	-	-
ENSPPRT00000027399	-	825	-	ENSPPRP00000026951	274 (aa)	-	-
ENSPPRT00000027376	-	927	-	ENSPPRP00000026936	308 (aa)	-	-

Gene Model

Click here to download ENSPPRG00000018110's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPPRG00000018110's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPPRG00000018110	-	79	37.500	ENSPPRG00000000370	MSI1	51	41.436
ENSPPRG00000018110	-	55	31.126	ENSPPRG00000003533	RBM4	90	31.126
ENSPPRG00000018110	-	63	85.549	ENSPPRG00000022225	-	88	62.687
ENSPPRG00000018110	-	61	40.698	ENSPPRG00000008838	CIRBP	51	40.698
ENSPPRG00000018110	-	63	86.207	ENSPPRG00000005026	-	84	86.111
ENSPPRG00000018110	-	97	67.918	ENSPPRG00000005893	-	97	66.553
ENSPPRG00000018110	-	79	40.909	ENSPPRG00000012258	HNRNPD	67	38.132
ENSPPRG00000018110	-	98	93.581	ENSPPRG00000015383	-	93	93.581
ENSPPRG00000018110	-	83	73.307	ENSPPRG00000012824	-	94	73.705
ENSPPRG00000018110	-	62	60.000	ENSPPRG00000014655	HNRNPA0	96	48.649
ENSPPRG00000018110	-	92	57.818	ENSPPRG00000009266	-	90	54.093
ENSPPRG00000018110	-	55	30.464	ENSPPRG00000003388	RBM4B	90	30.464
ENSPPRG00000018110	-	98	74.262	ENSPPRG00000022946	-	100	74.468
ENSPPRG00000018110	-	64	74.432	ENSPPRG00000015090	-	69	75.287
ENSPPRG00000018110	-	63	86.127	ENSPPRG00000022322	HNRNPA3	76	76.190
ENSPPRG00000018110	-	54	46.667	ENSPPRG00000013315	RBM3	54	41.667
ENSPPRG00000018110	-	64	39.535	ENSPPRG00000012584	DAZAP1	51	39.535
ENSPPRG00000018110	-	98	93.919	ENSPPRG00000012587	HNRNPA1	93	93.919
ENSPPRG00000018110	-	86	32.463	ENSPPRG00000020542	HNRNPAB	73	37.179
ENSPPRG00000018110	-	66	30.065	ENSPPRG00000019327	-	86	30.065
ENSPPRG00000018110	-	78	38.462	ENSPPRG00000001848	MSI2	70	42.771
ENSPPRG00000018110	-	66	79.070	ENSPPRG00000019212	HNRNPA2B1	84	78.286
ENSPPRG00000018110	-	63	86.705	ENSPPRG00000008329	-	64	86.705
ENSPPRG00000018110	-	63	79.769	ENSPPRG00000022001	-	77	65.966

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPPRG00000018110	-	98	71.088	ENSCAFG00000030783	-	99	65.300	Canis_familiaris
ENSPPRG00000018110	-	97	57.823	ENSCAFG00000017424	-	100	56.122	Canis_familiaris
ENSPPRG00000018110	-	98	69.728	ENSCAFG00000031044	-	99	65.300	Canis_familiaris
ENSPPRG00000018110	-	92	75.494	ENSCSAG00000004770	-	92	75.194	Chlorocebus_sabaeus
ENSPPRG00000018110	-	63	87.861	ENSCSAG00000000148	-	99	61.685	Chlorocebus_sabaeus
ENSPPRG00000018110	-	68	64.706	ENSDNOG00000037420	-	91	63.636	Dasypus_novemcinctus
ENSPPRG00000018110	-	92	60.714	ENSDNOG00000039025	-	98	65.254	Dasypus_novemcinctus
ENSPPRG00000018110	-	92	67.063	ENSDNOG00000036385	-	90	76.000	Dasypus_novemcinctus
ENSPPRG00000018110	-	98	81.081	ENSETEG00000010614	-	91	63.241	Echinops_telfairi
ENSPPRG00000018110	-	98	82.500	ENSETEG00000013374	-	98	56.884	Echinops_telfairi
ENSPPRG00000018110	-	59	55.488	ENSETEG00000005266	-	99	54.321	Echinops_telfairi
ENSPPRG00000018110	-	99	69.373	ENSETEG00000007429	-	98	68.116	Echinops_telfairi
ENSPPRG00000018110	-	95	67.143	ENSELUG00000020089	-	89	75.591	Esox_lucius
ENSPPRG00000018110	-	99	69.203	ENSFDAG00000009166	-	99	72.222	Fukomys_damarensis
ENSPPRG00000018110	-	93	59.843	ENSMPUG00000000096	-	94	60.465	Mustela_putorius_furo
ENSPPRG00000018110	-	85	86.127	ENSNLEG00000029989	-	100	64.045	Nomascus_leucogenys
ENSPPRG00000018110	-	78	81.395	ENSNLEG00000034385	-	71	81.522	Nomascus_leucogenys
ENSPPRG00000018110	-	89	93.158	ENSOCUG00000022668	-	99	72.059	Oryctolagus_cuniculus
ENSPPRG00000018110	-	99	48.187	ENSOARG00000010092	-	74	50.833	Ovis_aries
ENSPPRG00000018110	-	97	60.588	ENSPPYG00000004746	-	89	60.997	Pongo_abelii
ENSPPRG00000018110	-	98	92.308	ENSRNOG00000050603	AABR07055875.1	99	89.423	Rattus_norvegicus
ENSPPRG00000018110	-	98	92.308	ENSRNOG00000046286	AABR07055878.1	99	89.423	Rattus_norvegicus