EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPPRG00000018628 (Gene tree)
Gene ID: 109249317
Gene Symbol: PABPC4L
Alias: -
Full Name: poly(A) binding protein cytoplasmic 4 like
Gene Type: protein_coding
Species: Panthera_pardus
Status: putative
Strand: Minus strand
Length: 1113 bases
Position: chrKV860275.1:34115388-34116500
Accession: 109249317
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPPRP00000027285	RRM_5	PF13893.6	1.4e-15	1	3
ENSPPRP00000027285	RRM_5	PF13893.6	1.4e-15	2	3
ENSPPRP00000027285	RRM_5	PF13893.6	1.4e-15	3	3
ENSPPRP00000027285	RRM_1	PF00076.22	5.7e-86	1	4
ENSPPRP00000027285	RRM_1	PF00076.22	5.7e-86	2	4
ENSPPRP00000027285	RRM_1	PF00076.22	5.7e-86	3	4
ENSPPRP00000027285	RRM_1	PF00076.22	5.7e-86	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPPRT00000028068	PABPC4L-201	1113	XM_019419677	ENSPPRP00000027285	370 (aa)	XP_019275222	UPI000905008A

Gene Model

Click here to download ENSPPRG00000018628's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPPRG00000018628's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPPRG00000018628	PABPC4L	81	42.308	ENSPPRG00000013315	RBM3	72	42.308
ENSPPRG00000018628	PABPC4L	98	63.764	ENSPPRG00000010742	PABPC5	96	63.736
ENSPPRG00000018628	PABPC4L	96	62.245	ENSPPRG00000011804	-	99	62.245
ENSPPRG00000018628	PABPC4L	96	62.245	ENSPPRG00000011809	-	99	62.245
ENSPPRG00000018628	PABPC4L	95	30.112	ENSPPRG00000012175	TIA1	70	30.112
ENSPPRG00000018628	PABPC4L	53	32.184	ENSPPRG00000021783	-	50	37.143
ENSPPRG00000018628	PABPC4L	94	30.588	ENSPPRG00000007678	RBMS2	52	30.588
ENSPPRG00000018628	PABPC4L	99	53.963	ENSPPRG00000019327	-	99	53.963
ENSPPRG00000018628	PABPC4L	99	70.270	ENSPPRG00000003755	PABPC1	60	70.799
ENSPPRG00000018628	PABPC4L	98	30.519	ENSPPRG00000018510	ELAVL2	96	30.519
ENSPPRG00000018628	PABPC4L	99	40.000	ENSPPRG00000007384	SF3B4	56	40.000
ENSPPRG00000018628	PABPC4L	86	33.871	ENSPPRG00000002521	ELAVL1	88	33.871
ENSPPRG00000018628	PABPC4L	99	74.865	ENSPPRG00000024727	PABPC4	63	74.865
ENSPPRG00000018628	PABPC4L	61	41.333	ENSPPRG00000008838	CIRBP	51	41.333
ENSPPRG00000018628	PABPC4L	71	30.387	ENSPPRG00000022001	-	58	30.270

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPPRG00000018628	PABPC4L	99	89.702	ENSG00000254535	PABPC4L	99	89.702	Homo_sapiens
ENSPPRG00000018628	PABPC4L	99	87.263	ENSANAG00000017199	PABPC4L	86	87.263	Aotus_nancymaae
ENSPPRG00000018628	PABPC4L	100	92.973	ENSBTAG00000046902	PABPC4L	100	92.973	Bos_taurus
ENSPPRG00000018628	PABPC4L	99	87.534	ENSCJAG00000045332	PABPC4L	86	87.534	Callithrix_jacchus
ENSPPRG00000018628	PABPC4L	99	76.359	ENSCAFG00020019182	-	55	76.359	Canis_lupus_dingo
ENSPPRG00000018628	PABPC4L	100	92.703	ENSCHIG00000007231	PABPC4L	100	92.703	Capra_hircus
ENSPPRG00000018628	PABPC4L	97	80.240	ENSCAPG00000000555	PABPC4L	100	80.240	Cavia_aperea
ENSPPRG00000018628	PABPC4L	99	77.236	ENSCPOG00000033167	PABPC4L	100	77.236	Cavia_porcellus
ENSPPRG00000018628	PABPC4L	99	87.534	ENSCCAG00000031681	PABPC4L	86	87.534	Cebus_capucinus
ENSPPRG00000018628	PABPC4L	99	81.301	ENSCLAG00000017628	PABPC4L	99	81.301	Chinchilla_lanigera
ENSPPRG00000018628	PABPC4L	99	86.992	ENSCANG00000037677	PABPC4L	99	86.992	Colobus_angolensis_palliatus
ENSPPRG00000018628	PABPC4L	99	80.217	ENSCGRG00001002070	Pabpc4l	99	80.217	Cricetulus_griseus_chok1gshd
ENSPPRG00000018628	PABPC4L	99	80.217	ENSCGRG00000020086	Pabpc4l	99	80.217	Cricetulus_griseus_crigri
ENSPPRG00000018628	PABPC4L	99	89.702	ENSDNOG00000031077	PABPC4L	95	89.702	Dasypus_novemcinctus
ENSPPRG00000018628	PABPC4L	100	92.162	ENSEASG00005007883	PABPC4L	100	92.162	Equus_asinus_asinus
ENSPPRG00000018628	PABPC4L	100	92.703	ENSECAG00000031416	PABPC4L	100	92.703	Equus_caballus
ENSPPRG00000018628	PABPC4L	100	99.459	ENSFCAG00000028270	PABPC4L	100	99.459	Felis_catus
ENSPPRG00000018628	PABPC4L	100	80.811	ENSFDAG00000019606	PABPC4L	100	80.811	Fukomys_damarensis
ENSPPRG00000018628	PABPC4L	99	89.160	ENSGGOG00000024991	PABPC4L	99	89.160	Gorilla_gorilla
ENSPPRG00000018628	PABPC4L	100	81.081	ENSHGLG00000020104	PABPC4L	100	81.081	Heterocephalus_glaber_female
ENSPPRG00000018628	PABPC4L	100	81.081	ENSHGLG00100020648	PABPC4L	100	81.081	Heterocephalus_glaber_male
ENSPPRG00000018628	PABPC4L	99	84.324	ENSSTOG00000019472	PABPC4L	99	84.324	Ictidomys_tridecemlineatus
ENSPPRG00000018628	PABPC4L	100	80.541	ENSJJAG00000004090	Pabpc4l	100	80.541	Jaculus_jaculus
ENSPPRG00000018628	PABPC4L	99	79.675	ENSMAUG00000016313	Pabpc4l	99	79.675	Mesocricetus_auratus
ENSPPRG00000018628	PABPC4L	99	89.973	ENSMICG00000029683	PABPC4L	99	89.973	Microcebus_murinus
ENSPPRG00000018628	PABPC4L	99	81.301	ENSMOCG00000007551	Pabpc4l	99	81.301	Microtus_ochrogaster
ENSPPRG00000018628	PABPC4L	99	78.591	MGP_CAROLIEiJ_G0024968	Pabpc4l	100	80.000	Mus_caroli
ENSPPRG00000018628	PABPC4L	99	78.320	ENSMUSG00000090919	Pabpc4l	100	80.000	Mus_musculus
ENSPPRG00000018628	PABPC4L	99	78.591	MGP_PahariEiJ_G0026409	Pabpc4l	100	78.000	Mus_pahari
ENSPPRG00000018628	PABPC4L	99	77.778	MGP_SPRETEiJ_G0025903	Pabpc4l	100	80.000	Mus_spretus
ENSPPRG00000018628	PABPC4L	99	81.301	ENSMLUG00000008254	PABPC4L	99	81.301	Myotis_lucifugus
ENSPPRG00000018628	PABPC4L	99	84.011	ENSNGAG00000001502	Pabpc4l	99	84.011	Nannospalax_galili
ENSPPRG00000018628	PABPC4L	99	89.431	ENSNLEG00000019300	PABPC4L	99	89.431	Nomascus_leucogenys
ENSPPRG00000018628	PABPC4L	99	83.198	ENSOGAG00000026166	PABPC4L	99	83.198	Otolemur_garnettii
ENSPPRG00000018628	PABPC4L	99	90.093	ENSPPAG00000043745	PABPC4L	93	90.093	Pan_paniscus
ENSPPRG00000018628	PABPC4L	100	99.459	ENSPTIG00000010106	PABPC4L	100	99.459	Panthera_tigris_altaica
ENSPPRG00000018628	PABPC4L	99	90.093	ENSPTRG00000045513	-	78	90.093	Pan_troglodytes
ENSPPRG00000018628	PABPC4L	99	80.217	ENSPEMG00000012565	Pabpc4l	99	80.217	Peromyscus_maniculatus_bairdii
ENSPPRG00000018628	PABPC4L	99	89.431	ENSPCOG00000025578	PABPC4L	99	89.431	Propithecus_coquereli
ENSPPRG00000018628	PABPC4L	99	79.404	ENSRNOG00000029749	Pabpc4l	99	79.404	Rattus_norvegicus
ENSPPRG00000018628	PABPC4L	99	86.450	ENSRBIG00000030229	PABPC4L	99	86.450	Rhinopithecus_bieti
ENSPPRG00000018628	PABPC4L	99	86.179	ENSRROG00000020367	PABPC4L	99	86.179	Rhinopithecus_roxellana
ENSPPRG00000018628	PABPC4L	99	85.908	ENSSBOG00000016382	PABPC4L	99	85.908	Saimiri_boliviensis_boliviensis
ENSPPRG00000018628	PABPC4L	100	87.027	ENSSSCG00000009067	PABPC4L	100	87.027	Sus_scrofa
ENSPPRG00000018628	PABPC4L	100	96.216	ENSUAMG00000001289	PABPC4L	100	96.216	Ursus_americanus
ENSPPRG00000018628	PABPC4L	100	96.216	ENSUMAG00000014887	PABPC4L	100	96.216	Ursus_maritimus
ENSPPRG00000018628	PABPC4L	96	78.049	ENSVVUG00000011060	-	89	78.049	Vulpes_vulpes