EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPPRG00000018881 (Gene tree)
Gene ID: 109276865
Gene Symbol: TNRC6C
Alias: -
Full Name: trinucleotide repeat containing 6C
Gene Type: protein_coding
Species: Panthera_pardus
Status: putative
Strand: Minus strand
Length: 102411 bases
Position: chrKV860320.1:4926327-5028737
Accession: 109276865
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPPRP00000027120	Ago_hook	PF10427.9	1.3e-20	1	1
ENSPPRP00000027151	Ago_hook	PF10427.9	1.5e-20	1	1
ENSPPRP00000027120	RRM_1	PF00076.22	0.00014	1	1
ENSPPRP00000027151	RRM_1	PF00076.22	0.00016	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPPRT00000027767	TNRC6C-202	5832	-	ENSPPRP00000027151	1943 (aa)	-	-
ENSPPRT00000027708	TNRC6C-201	5070	XM_019466070	ENSPPRP00000027120	1689 (aa)	XP_019321615	-

Gene Model

Click here to download ENSPPRG00000018881's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPPRG00000018881's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPPRG00000018881	TNRC6C	99	43.123	ENSPPRG00000005861	TNRC6A	98	42.822
ENSPPRG00000018881	TNRC6C	95	40.956	ENSPPRG00000017741	TNRC6B	98	40.522

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPPRG00000018881	TNRC6C	100	89.315	ENSG00000078687	TNRC6C	100	89.374	Homo_sapiens
ENSPPRG00000018881	TNRC6C	80	54.779	ENSAPOG00000019749	tnrc6c1	98	48.732	Acanthochromis_polyacanthus
ENSPPRG00000018881	TNRC6C	100	88.946	ENSAMEG00000013756	TNRC6C	100	90.670	Ailuropoda_melanoleuca
ENSPPRG00000018881	TNRC6C	91	51.920	ENSACIG00000008075	tnrc6c1	79	52.624	Amphilophus_citrinellus
ENSPPRG00000018881	TNRC6C	80	62.193	ENSAOCG00000023968	tnrc6c1	99	45.337	Amphiprion_ocellaris
ENSPPRG00000018881	TNRC6C	80	53.526	ENSAPEG00000009020	tnrc6c1	99	48.017	Amphiprion_percula
ENSPPRG00000018881	TNRC6C	99	83.678	ENSAPLG00000005456	TNRC6C	100	83.626	Anas_platyrhynchos
ENSPPRG00000018881	TNRC6C	100	82.785	ENSACAG00000016198	TNRC6C	98	83.750	Anolis_carolinensis
ENSPPRG00000018881	TNRC6C	100	88.777	ENSANAG00000021554	TNRC6C	100	88.777	Aotus_nancymaae
ENSPPRG00000018881	TNRC6C	98	50.884	ENSACLG00000000424	tnrc6c1	79	51.652	Astatotilapia_calliptera
ENSPPRG00000018881	TNRC6C	100	88.600	ENSBTAG00000018658	TNRC6C	100	89.132	Bos_taurus
ENSPPRG00000018881	TNRC6C	100	88.895	ENSCJAG00000019431	TNRC6C	100	88.955	Callithrix_jacchus
ENSPPRG00000018881	TNRC6C	99	93.177	ENSCAFG00000005224	TNRC6C	99	92.917	Canis_familiaris
ENSPPRG00000018881	TNRC6C	100	93.636	ENSCAFG00020006661	TNRC6C	100	92.895	Canis_lupus_dingo
ENSPPRG00000018881	TNRC6C	100	88.876	ENSCHIG00000026004	TNRC6C	100	87.471	Capra_hircus
ENSPPRG00000018881	TNRC6C	100	88.042	ENSTSYG00000005403	TNRC6C	100	89.689	Carlito_syrichta
ENSPPRG00000018881	TNRC6C	100	82.235	ENSCAPG00000007307	TNRC6C	99	80.753	Cavia_aperea
ENSPPRG00000018881	TNRC6C	100	87.589	ENSCPOG00000000467	TNRC6C	100	85.554	Cavia_porcellus
ENSPPRG00000018881	TNRC6C	100	89.309	ENSCCAG00000030524	TNRC6C	100	89.368	Cebus_capucinus
ENSPPRG00000018881	TNRC6C	100	89.250	ENSCATG00000033135	TNRC6C	100	89.309	Cercocebus_atys
ENSPPRG00000018881	TNRC6C	100	89.421	ENSCLAG00000011139	TNRC6C	99	86.167	Chinchilla_lanigera
ENSPPRG00000018881	TNRC6C	99	88.098	ENSCSAG00000005167	TNRC6C	99	88.150	Chlorocebus_sabaeus
ENSPPRG00000018881	TNRC6C	71	89.137	ENSCHOG00000000088	TNRC6C	75	83.193	Choloepus_hoffmanni
ENSPPRG00000018881	TNRC6C	100	85.985	ENSCPBG00000027960	TNRC6C	100	85.985	Chrysemys_picta_bellii
ENSPPRG00000018881	TNRC6C	100	88.895	ENSCANG00000041771	TNRC6C	100	88.955	Colobus_angolensis_palliatus
ENSPPRG00000018881	TNRC6C	100	87.184	ENSCGRG00001022686	Tnrc6c	100	85.773	Cricetulus_griseus_chok1gshd
ENSPPRG00000018881	TNRC6C	100	87.596	ENSCGRG00000018041	Tnrc6c	100	85.773	Cricetulus_griseus_crigri
ENSPPRG00000018881	TNRC6C	100	47.872	ENSCSEG00000012744	tnrc6c1	99	43.395	Cynoglossus_semilaevis
ENSPPRG00000018881	TNRC6C	99	50.637	ENSDARG00000076847	tnrc6c1	96	54.421	Danio_rerio
ENSPPRG00000018881	TNRC6C	100	86.590	ENSDNOG00000003247	TNRC6C	99	86.004	Dasypus_novemcinctus
ENSPPRG00000018881	TNRC6C	100	84.765	ENSDORG00000004558	Tnrc6c	100	84.353	Dipodomys_ordii
ENSPPRG00000018881	TNRC6C	90	81.217	ENSETEG00000005527	TNRC6C	86	81.602	Echinops_telfairi
ENSPPRG00000018881	TNRC6C	100	90.888	ENSEASG00005004799	TNRC6C	100	90.888	Equus_asinus_asinus
ENSPPRG00000018881	TNRC6C	100	90.888	ENSECAG00000012486	TNRC6C	99	89.823	Equus_caballus
ENSPPRG00000018881	TNRC6C	96	87.246	ENSEEUG00000010008	TNRC6C	96	87.648	Erinaceus_europaeus
ENSPPRG00000018881	TNRC6C	100	99.485	ENSFCAG00000028358	TNRC6C	100	99.485	Felis_catus
ENSPPRG00000018881	TNRC6C	100	82.060	ENSFALG00000000848	TNRC6C	100	83.860	Ficedula_albicollis
ENSPPRG00000018881	TNRC6C	100	89.066	ENSFDAG00000010368	TNRC6C	100	86.058	Fukomys_damarensis
ENSPPRG00000018881	TNRC6C	95	64.852	ENSFHEG00000002936	tnrc6c1	99	45.883	Fundulus_heteroclitus
ENSPPRG00000018881	TNRC6C	100	86.399	ENSGALG00000001725	TNRC6C	100	86.576	Gallus_gallus
ENSPPRG00000018881	TNRC6C	100	48.476	ENSGAFG00000019019	tnrc6c1	100	48.475	Gambusia_affinis
ENSPPRG00000018881	TNRC6C	80	53.419	ENSGACG00000012320	tnrc6c1	99	47.181	Gasterosteus_aculeatus
ENSPPRG00000018881	TNRC6C	100	85.638	ENSGAGG00000022043	TNRC6C	99	85.044	Gopherus_agassizii
ENSPPRG00000018881	TNRC6C	100	88.548	ENSGGOG00000011304	TNRC6C	100	88.548	Gorilla_gorilla
ENSPPRG00000018881	TNRC6C	98	51.062	ENSHBUG00000010846	tnrc6c1	85	51.458	Haplochromis_burtoni
ENSPPRG00000018881	TNRC6C	100	88.830	ENSHGLG00000004809	TNRC6C	99	85.655	Heterocephalus_glaber_female
ENSPPRG00000018881	TNRC6C	100	87.941	ENSHGLG00100012597	TNRC6C	99	85.759	Heterocephalus_glaber_male
ENSPPRG00000018881	TNRC6C	97	53.647	ENSIPUG00000000818	tnrc6c1	72	60.074	Ictalurus_punctatus
ENSPPRG00000018881	TNRC6C	100	87.485	ENSSTOG00000009101	TNRC6C	100	85.067	Ictidomys_tridecemlineatus
ENSPPRG00000018881	TNRC6C	100	86.361	ENSJJAG00000017055	Tnrc6c	99	83.853	Jaculus_jaculus
ENSPPRG00000018881	TNRC6C	100	49.020	ENSKMAG00000021023	tnrc6c1	97	49.881	Kryptolebias_marmoratus
ENSPPRG00000018881	TNRC6C	100	73.857	ENSLACG00000015283	TNRC6C	100	72.404	Latimeria_chalumnae
ENSPPRG00000018881	TNRC6C	99	56.379	ENSLOCG00000013377	tnrc6c1	99	55.171	Lepisosteus_oculatus
ENSPPRG00000018881	TNRC6C	100	88.693	ENSLAFG00000011122	TNRC6C	99	86.413	Loxodonta_africana
ENSPPRG00000018881	TNRC6C	100	89.191	ENSMFAG00000043943	TNRC6C	100	89.250	Macaca_fascicularis
ENSPPRG00000018881	TNRC6C	100	89.191	ENSMMUG00000011924	TNRC6C	100	89.250	Macaca_mulatta
ENSPPRG00000018881	TNRC6C	100	89.191	ENSMNEG00000030405	TNRC6C	100	89.250	Macaca_nemestrina
ENSPPRG00000018881	TNRC6C	100	89.250	ENSMLEG00000033436	TNRC6C	100	89.309	Mandrillus_leucophaeus
ENSPPRG00000018881	TNRC6C	80	52.241	ENSMAMG00000023613	tnrc6c1	97	50.715	Mastacembelus_armatus
ENSPPRG00000018881	TNRC6C	98	50.918	ENSMZEG00005010920	tnrc6c1	79	51.652	Maylandia_zebra
ENSPPRG00000018881	TNRC6C	99	77.543	ENSMGAG00000003906	TNRC6C	100	77.468	Meleagris_gallopavo
ENSPPRG00000018881	TNRC6C	100	86.714	ENSMAUG00000021618	Tnrc6c	100	86.890	Mesocricetus_auratus
ENSPPRG00000018881	TNRC6C	100	89.959	ENSMICG00000003952	TNRC6C	100	89.781	Microcebus_murinus
ENSPPRG00000018881	TNRC6C	100	88.600	ENSMOCG00000015879	Tnrc6c	100	85.786	Microtus_ochrogaster
ENSPPRG00000018881	TNRC6C	79	54.376	ENSMMOG00000005203	tnrc6c1	100	49.408	Mola_mola
ENSPPRG00000018881	TNRC6C	100	84.195	ENSMODG00000001785	TNRC6C	99	81.610	Monodelphis_domestica
ENSPPRG00000018881	TNRC6C	100	88.423	MGP_CAROLIEiJ_G0017465	Tnrc6c	100	85.618	Mus_caroli
ENSPPRG00000018881	TNRC6C	100	87.891	ENSMUSG00000025571	Tnrc6c	100	85.115	Mus_musculus
ENSPPRG00000018881	TNRC6C	100	88.305	MGP_PahariEiJ_G0018593	Tnrc6c	100	85.506	Mus_pahari
ENSPPRG00000018881	TNRC6C	100	87.950	MGP_SPRETEiJ_G0018309	Tnrc6c	100	85.171	Mus_spretus
ENSPPRG00000018881	TNRC6C	99	90.739	ENSMPUG00000013348	TNRC6C	98	90.625	Mustela_putorius_furo
ENSPPRG00000018881	TNRC6C	100	83.065	ENSMLUG00000014431	TNRC6C	98	82.202	Myotis_lucifugus
ENSPPRG00000018881	TNRC6C	100	87.647	ENSNGAG00000012203	Tnrc6c	99	85.439	Nannospalax_galili
ENSPPRG00000018881	TNRC6C	98	51.401	ENSNBRG00000005344	tnrc6c1	79	52.757	Neolamprologus_brichardi
ENSPPRG00000018881	TNRC6C	98	86.594	ENSNLEG00000000047	TNRC6C	99	86.489	Nomascus_leucogenys
ENSPPRG00000018881	TNRC6C	97	78.511	ENSMEUG00000005104	TNRC6C	99	86.979	Notamacropus_eugenii
ENSPPRG00000018881	TNRC6C	100	88.771	ENSODEG00000012499	TNRC6C	100	88.948	Octodon_degus
ENSPPRG00000018881	TNRC6C	94	51.183	ENSONIG00000002210	tnrc6c1	96	50.476	Oreochromis_niloticus
ENSPPRG00000018881	TNRC6C	99	63.956	ENSOANG00000009758	-	100	60.771	Ornithorhynchus_anatinus
ENSPPRG00000018881	TNRC6C	85	79.326	ENSOCUG00000006122	TNRC6C	95	75.298	Oryctolagus_cuniculus
ENSPPRG00000018881	TNRC6C	91	49.786	ENSORLG00000009837	tnrc6c1	100	66.914	Oryzias_latipes
ENSPPRG00000018881	TNRC6C	91	49.756	ENSORLG00020016510	tnrc6c1	97	48.997	Oryzias_latipes_hni
ENSPPRG00000018881	TNRC6C	72	44.774	ENSORLG00015000171	tnrc6c1	94	44.213	Oryzias_latipes_hsok
ENSPPRG00000018881	TNRC6C	91	49.847	ENSOMEG00000000357	tnrc6c1	99	44.140	Oryzias_melastigma
ENSPPRG00000018881	TNRC6C	100	86.135	ENSOGAG00000007197	TNRC6C	100	87.903	Otolemur_garnettii
ENSPPRG00000018881	TNRC6C	95	85.165	ENSOARG00000006041	TNRC6C	98	85.328	Ovis_aries
ENSPPRG00000018881	TNRC6C	100	89.250	ENSPPAG00000027160	TNRC6C	100	89.309	Pan_paniscus
ENSPPRG00000018881	TNRC6C	90	92.576	ENSPTIG00000008791	TNRC6C	91	94.430	Panthera_tigris_altaica
ENSPPRG00000018881	TNRC6C	100	89.368	ENSPTRG00000009699	TNRC6C	100	89.427	Pan_troglodytes
ENSPPRG00000018881	TNRC6C	100	89.073	ENSPANG00000019994	TNRC6C	100	89.132	Papio_anubis
ENSPPRG00000018881	TNRC6C	96	52.094	ENSPKIG00000005428	tnrc6c1	98	51.105	Paramormyrops_kingsleyae
ENSPPRG00000018881	TNRC6C	100	83.737	ENSPSIG00000018069	TNRC6C	100	81.655	Pelodiscus_sinensis
ENSPPRG00000018881	TNRC6C	66	57.294	ENSPMGG00000022911	tnrc6c1	97	61.224	Periophthalmus_magnuspinnatus
ENSPPRG00000018881	TNRC6C	100	87.831	ENSPEMG00000009785	Tnrc6c	100	85.185	Peromyscus_maniculatus_bairdii
ENSPPRG00000018881	TNRC6C	58	82.431	ENSPCIG00000017421	-	99	82.275	Phascolarctos_cinereus
ENSPPRG00000018881	TNRC6C	100	48.450	ENSPFOG00000012560	tnrc6c1	97	52.888	Poecilia_formosa
ENSPPRG00000018881	TNRC6C	100	48.505	ENSPLAG00000021055	tnrc6c1	100	48.965	Poecilia_latipinna
ENSPPRG00000018881	TNRC6C	99	88.629	ENSPPYG00000008679	TNRC6C	98	88.669	Pongo_abelii
ENSPPRG00000018881	TNRC6C	93	93.128	ENSPCAG00000012510	TNRC6C	91	93.128	Procavia_capensis
ENSPPRG00000018881	TNRC6C	100	90.490	ENSPCOG00000021451	TNRC6C	100	90.431	Propithecus_coquereli
ENSPPRG00000018881	TNRC6C	96	92.373	ENSPVAG00000002008	TNRC6C	95	92.373	Pteropus_vampyrus
ENSPPRG00000018881	TNRC6C	98	50.813	ENSPNYG00000014477	tnrc6c1	85	51.216	Pundamilia_nyererei
ENSPPRG00000018881	TNRC6C	100	88.024	ENSRNOG00000022395	Tnrc6c	100	87.906	Rattus_norvegicus
ENSPPRG00000018881	TNRC6C	100	89.014	ENSRBIG00000027777	TNRC6C	100	89.073	Rhinopithecus_bieti
ENSPPRG00000018881	TNRC6C	100	89.073	ENSRROG00000042912	TNRC6C	100	89.132	Rhinopithecus_roxellana
ENSPPRG00000018881	TNRC6C	99	88.358	ENSSBOG00000023981	TNRC6C	100	88.371	Saimiri_boliviensis_boliviensis
ENSPPRG00000018881	TNRC6C	52	85.157	ENSSHAG00000018330	-	100	87.003	Sarcophilus_harrisii
ENSPPRG00000018881	TNRC6C	80	56.034	ENSSFOG00015004735	-	99	60.313	Scleropages_formosus
ENSPPRG00000018881	TNRC6C	92	56.965	ENSSFOG00015006475	tnrc6c1	99	50.544	Scleropages_formosus
ENSPPRG00000018881	TNRC6C	96	50.145	ENSSMAG00000012761	tnrc6c1	99	49.740	Scophthalmus_maximus
ENSPPRG00000018881	TNRC6C	99	50.604	ENSSDUG00000002366	tnrc6c1	99	48.733	Seriola_dumerili
ENSPPRG00000018881	TNRC6C	99	48.802	ENSSLDG00000025613	tnrc6c1	97	50.086	Seriola_lalandi_dorsalis
ENSPPRG00000018881	TNRC6C	91	92.241	ENSSARG00000006816	TNRC6C	91	90.756	Sorex_araneus
ENSPPRG00000018881	TNRC6C	80	85.010	ENSSPUG00000007341	TNRC6C	98	85.010	Sphenodon_punctatus
ENSPPRG00000018881	TNRC6C	78	52.758	ENSSPAG00000014977	tnrc6c1	98	45.516	Stegastes_partitus
ENSPPRG00000018881	TNRC6C	100	86.458	ENSSSCG00000034373	TNRC6C	100	91.870	Sus_scrofa
ENSPPRG00000018881	TNRC6C	100	86.229	ENSTGUG00000007733	TNRC6C	100	83.622	Taeniopygia_guttata
ENSPPRG00000018881	TNRC6C	80	52.493	ENSTRUG00000011685	tnrc6c1	97	49.266	Takifugu_rubripes
ENSPPRG00000018881	TNRC6C	94	54.473	ENSTNIG00000005273	tnrc6c1	100	60.447	Tetraodon_nigroviridis
ENSPPRG00000018881	TNRC6C	64	90.234	ENSTBEG00000005046	TNRC6C	95	90.234	Tupaia_belangeri
ENSPPRG00000018881	TNRC6C	100	90.538	ENSTTRG00000010828	TNRC6C	97	90.538	Tursiops_truncatus
ENSPPRG00000018881	TNRC6C	100	91.112	ENSUMAG00000013614	TNRC6C	99	91.307	Ursus_maritimus
ENSPPRG00000018881	TNRC6C	52	83.657	ENSVPAG00000006765	-	100	83.657	Vicugna_pacos
ENSPPRG00000018881	TNRC6C	100	94.316	ENSVVUG00000015268	TNRC6C	100	94.316	Vulpes_vulpes
ENSPPRG00000018881	TNRC6C	100	73.239	ENSXETG00000019470	tnrc6c	100	73.063	Xenopus_tropicalis
ENSPPRG00000018881	TNRC6C	100	49.943	ENSXMAG00000025971	tnrc6c1	100	48.337	Xiphophorus_maculatus