EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPPRG00000018908 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Panthera_pardus
Status: putative
Strand: Minus strand
Length: 267 bases
Position: chrKV860319.1:5859324-5859590
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPPRP00000027459	LSM	PF01423.22	1.3e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPPRT00000028389	-	267	-	ENSPPRP00000027459	88 (aa)	-	-

Gene Model

Click here to download ENSPPRG00000018908's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPPRG00000018908's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPPRG00000018908	-	78	52.174	ENSPPRG00000024804	-	97	52.174

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPPRG00000018908	-	70	77.419	ENSG00000125835	SNRPB	73	78.431	Homo_sapiens
ENSPPRG00000018908	-	52	73.913	ENSAPEG00000008846	-	70	73.913	Amphiprion_percula
ENSPPRG00000018908	-	63	56.364	ENSBTAG00000024548	-	74	56.364	Bos_taurus
ENSPPRG00000018908	-	63	72.727	ENSCJAG00000041673	-	71	72.727	Callithrix_jacchus
ENSPPRG00000018908	-	63	61.818	ENSCAFG00020003638	-	71	61.818	Canis_lupus_dingo
ENSPPRG00000018908	-	53	74.468	ENSCAFG00020020370	-	63	74.468	Canis_lupus_dingo
ENSPPRG00000018908	-	76	63.235	ENSCAFG00020013247	-	81	63.235	Canis_lupus_dingo
ENSPPRG00000018908	-	63	56.364	ENSCHIG00000024610	-	76	56.863	Capra_hircus
ENSPPRG00000018908	-	69	73.770	ENSCCAG00000035140	-	88	74.000	Cebus_capucinus
ENSPPRG00000018908	-	70	77.419	ENSCANG00000019461	SNRPB	61	78.000	Colobus_angolensis_palliatus
ENSPPRG00000018908	-	52	58.696	ENSFCAG00000041049	-	57	58.696	Felis_catus
ENSPPRG00000018908	-	58	78.431	ENSMAUG00000006516	-	78	78.431	Mesocricetus_auratus
ENSPPRG00000018908	-	57	78.000	ENSMAUG00000020656	-	64	78.000	Mesocricetus_auratus
ENSPPRG00000018908	-	70	77.419	MGP_CAROLIEiJ_G0024293	Snrpb	73	78.431	Mus_caroli
ENSPPRG00000018908	-	70	77.419	ENSMUSG00000027404	Snrpb	73	78.431	Mus_musculus
ENSPPRG00000018908	-	70	77.419	MGP_PahariEiJ_G0025738	Snrpb	73	78.431	Mus_pahari
ENSPPRG00000018908	-	70	77.419	MGP_SPRETEiJ_G0025213	Snrpb	72	78.431	Mus_spretus
ENSPPRG00000018908	-	70	72.581	ENSPMAG00000004923	SNRPB	70	72.581	Petromyzon_marinus
ENSPPRG00000018908	-	70	77.419	ENSRNOG00000006961	Snrpb	99	60.000	Rattus_norvegicus
ENSPPRG00000018908	-	57	64.000	ENSUAMG00000016301	-	68	64.000	Ursus_americanus
ENSPPRG00000018908	-	57	64.000	ENSUMAG00000011571	-	60	64.000	Ursus_maritimus
ENSPPRG00000018908	-	64	71.429	ENSVVUG00000011423	-	73	71.429	Vulpes_vulpes
ENSPPRG00000018908	-	52	67.391	ENSXCOG00000017217	snrpb	52	67.391	Xiphophorus_couchianus