EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPPRG00000021387 (Gene tree)
Gene ID: 109275719
Gene Symbol: MBD1
Alias: -
Full Name: methyl-CpG binding domain protein 1
Gene Type: protein_coding
Species: Panthera_pardus
Status: putative
Strand: Plus strand
Length: 16009 bases
Position: chrKV860315.1:13939730-13955738
Accession: 109275719
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPPRP00000028882	MBD	PF01429.19	2.5e-16	1	1
ENSPPRP00000028766	MBD	PF01429.19	2.5e-16	1	1
ENSPPRP00000028932	MBD	PF01429.19	2.6e-16	1	1
ENSPPRP00000028809	MBD	PF01429.19	2.7e-16	1	1
ENSPPRP00000028782	MBD	PF01429.19	2.9e-16	1	1
ENSPPRP00000028862	MBD	PF01429.19	3e-16	1	1
ENSPPRP00000028897	MBD	PF01429.19	3.2e-16	1	1
ENSPPRP00000028877	MBD	PF01429.19	3.3e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPPRT00000031100	MBD1-208	3497	XM_019464054	ENSPPRP00000028932	558 (aa)	XP_019319599	UPI000904C584
ENSPPRT00000030997	MBD1-205	3027	-	ENSPPRP00000028877	661 (aa)	-	UPI000904C790
ENSPPRT00000030990	MBD1-204	3642	-	ENSPPRP00000028862	607 (aa)	-	UPI0009050BC2
ENSPPRT00000030817	MBD1-201	1617	XM_019464058	ENSPPRP00000028766	538 (aa)	XP_019319603	-
ENSPPRT00000031036	MBD1-207	3718	XM_019464066	ENSPPRP00000028897	632 (aa)	XP_019319611	UPI000905AA3A
ENSPPRT00000031021	MBD1-206	3436	-	ENSPPRP00000028882	538 (aa)	-	UPI000904AFF0
ENSPPRT00000030851	MBD1-202	1707	-	ENSPPRP00000028782	568 (aa)	-	-
ENSPPRT00000030889	MBD1-203	1689	XM_019464047	ENSPPRP00000028809	562 (aa)	XP_019319592	-

Gene Model

Click here to download ENSPPRG00000021387's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPPRG00000021387's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPPRG00000021387	MBD1	100	87.975	ENSG00000141644	MBD1	100	88.468	Homo_sapiens
ENSPPRG00000021387	MBD1	100	96.835	ENSAMEG00000000238	MBD1	96	96.835	Ailuropoda_melanoleuca
ENSPPRG00000021387	MBD1	74	32.489	ENSACIG00000010590	mbd1b	52	31.984	Amphilophus_citrinellus
ENSPPRG00000021387	MBD1	70	33.659	ENSAOCG00000020272	mbd1b	52	32.710	Amphiprion_ocellaris
ENSPPRG00000021387	MBD1	70	33.659	ENSAPEG00000023230	mbd1b	52	32.018	Amphiprion_percula
ENSPPRG00000021387	MBD1	78	30.958	ENSATEG00000009608	mbd1b	52	31.963	Anabas_testudineus
ENSPPRG00000021387	MBD1	71	43.980	ENSACAG00000006091	-	100	44.068	Anolis_carolinensis
ENSPPRG00000021387	MBD1	100	87.025	ENSANAG00000036253	MBD1	100	87.500	Aotus_nancymaae
ENSPPRG00000021387	MBD1	66	36.782	ENSACLG00000021383	mbd1b	50	34.649	Astatotilapia_calliptera
ENSPPRG00000021387	MBD1	100	89.873	ENSBTAG00000003801	MBD1	100	89.399	Bos_taurus
ENSPPRG00000021387	MBD1	100	85.779	ENSCJAG00000004959	MBD1	100	86.233	Callithrix_jacchus
ENSPPRG00000021387	MBD1	100	95.411	ENSCAFG00000018928	MBD1	96	95.411	Canis_familiaris
ENSPPRG00000021387	MBD1	99	94.712	ENSCAFG00020024272	MBD1	97	94.712	Canis_lupus_dingo
ENSPPRG00000021387	MBD1	100	89.399	ENSCHIG00000021134	MBD1	100	89.082	Capra_hircus
ENSPPRG00000021387	MBD1	100	88.291	ENSTSYG00000000509	MBD1	100	87.816	Carlito_syrichta
ENSPPRG00000021387	MBD1	99	65.909	ENSCAPG00000015782	MBD1	96	65.559	Cavia_aperea
ENSPPRG00000021387	MBD1	100	72.712	ENSCPOG00000001671	MBD1	100	71.215	Cavia_porcellus
ENSPPRG00000021387	MBD1	100	84.814	ENSCCAG00000034600	MBD1	100	84.720	Cebus_capucinus
ENSPPRG00000021387	MBD1	100	88.303	ENSCATG00000029959	MBD1	100	88.797	Cercocebus_atys
ENSPPRG00000021387	MBD1	100	85.127	ENSCLAG00000007457	MBD1	89	84.810	Chinchilla_lanigera
ENSPPRG00000021387	MBD1	100	88.138	ENSCSAG00000018070	MBD1	100	88.633	Chlorocebus_sabaeus
ENSPPRG00000021387	MBD1	100	88.138	ENSCANG00000033425	MBD1	100	88.633	Colobus_angolensis_palliatus
ENSPPRG00000021387	MBD1	100	74.304	ENSCGRG00001014843	Mbd1	100	73.813	Cricetulus_griseus_chok1gshd
ENSPPRG00000021387	MBD1	99	61.863	ENSCGRG00000014135	Mbd1	96	61.511	Cricetulus_griseus_crigri
ENSPPRG00000021387	MBD1	100	82.437	ENSDNOG00000015998	MBD1	100	83.386	Dasypus_novemcinctus
ENSPPRG00000021387	MBD1	99	70.775	ENSDORG00000013917	Mbd1	97	77.812	Dipodomys_ordii
ENSPPRG00000021387	MBD1	100	92.247	ENSEASG00005003857	MBD1	100	92.247	Equus_asinus_asinus
ENSPPRG00000021387	MBD1	100	91.928	ENSECAG00000011497	MBD1	80	91.928	Equus_caballus
ENSPPRG00000021387	MBD1	100	99.842	ENSFCAG00000015730	MBD1	100	99.842	Felis_catus
ENSPPRG00000021387	MBD1	99	79.929	ENSFDAG00000011085	MBD1	96	79.574	Fukomys_damarensis
ENSPPRG00000021387	MBD1	75	35.437	ENSFHEG00000020120	mbd1b	51	35.294	Fundulus_heteroclitus
ENSPPRG00000021387	MBD1	78	32.084	ENSGACG00000012106	-	70	32.609	Gasterosteus_aculeatus
ENSPPRG00000021387	MBD1	100	87.975	ENSGGOG00000016966	MBD1	100	88.468	Gorilla_gorilla
ENSPPRG00000021387	MBD1	60	33.085	ENSHBUG00000014270	mbd1b	50	34.211	Haplochromis_burtoni
ENSPPRG00000021387	MBD1	100	84.494	ENSHGLG00000008740	MBD1	100	84.177	Heterocephalus_glaber_female
ENSPPRG00000021387	MBD1	92	88.312	ENSHGLG00100005198	MBD1	100	84.273	Heterocephalus_glaber_male
ENSPPRG00000021387	MBD1	72	32.727	ENSHCOG00000009952	mbd1b	52	34.404	Hippocampus_comes
ENSPPRG00000021387	MBD1	64	38.065	ENSIPUG00000015243	-	50	39.735	Ictalurus_punctatus
ENSPPRG00000021387	MBD1	100	82.658	ENSSTOG00000007780	MBD1	100	82.820	Ictidomys_tridecemlineatus
ENSPPRG00000021387	MBD1	98	71.025	ENSJJAG00000022859	Mbd1	96	71.555	Jaculus_jaculus
ENSPPRG00000021387	MBD1	66	30.485	ENSKMAG00000020760	mbd1b	54	31.207	Kryptolebias_marmoratus
ENSPPRG00000021387	MBD1	96	37.072	ENSLACG00000002414	-	78	36.346	Latimeria_chalumnae
ENSPPRG00000021387	MBD1	99	76.821	ENSLAFG00000031328	MBD1	98	77.213	Loxodonta_africana
ENSPPRG00000021387	MBD1	100	88.797	ENSMFAG00000026335	MBD1	100	88.303	Macaca_fascicularis
ENSPPRG00000021387	MBD1	100	88.766	ENSMMUG00000009050	MBD1	100	88.291	Macaca_mulatta
ENSPPRG00000021387	MBD1	100	88.797	ENSMNEG00000038822	MBD1	100	88.303	Macaca_nemestrina
ENSPPRG00000021387	MBD1	100	88.138	ENSMLEG00000043121	MBD1	100	88.633	Mandrillus_leucophaeus
ENSPPRG00000021387	MBD1	76	33.971	ENSMAMG00000023341	-	64	36.058	Mastacembelus_armatus
ENSPPRG00000021387	MBD1	66	36.782	ENSMZEG00005010421	mbd1b	50	34.649	Maylandia_zebra
ENSPPRG00000021387	MBD1	100	87.013	ENSMICG00000006414	MBD1	100	87.175	Microcebus_murinus
ENSPPRG00000021387	MBD1	52	74.558	ENSMOCG00000011976	-	93	78.707	Microtus_ochrogaster
ENSPPRG00000021387	MBD1	72	42.963	ENSMODG00000001286	-	57	44.675	Monodelphis_domestica
ENSPPRG00000021387	MBD1	99	67.143	ENSMUSG00000024561	Mbd1	97	66.401	Mus_musculus
ENSPPRG00000021387	MBD1	100	67.353	MGP_PahariEiJ_G0019128	Mbd1	100	67.829	Mus_pahari
ENSPPRG00000021387	MBD1	98	68.608	MGP_SPRETEiJ_G0023304	Mbd1	99	67.799	Mus_spretus
ENSPPRG00000021387	MBD1	100	95.728	ENSMPUG00000008843	MBD1	96	95.728	Mustela_putorius_furo
ENSPPRG00000021387	MBD1	100	90.506	ENSMLUG00000008286	MBD1	96	90.032	Myotis_lucifugus
ENSPPRG00000021387	MBD1	98	69.497	ENSNGAG00000011412	Mbd1	96	68.977	Nannospalax_galili
ENSPPRG00000021387	MBD1	98	72.824	ENSNLEG00000032711	-	100	66.415	Nomascus_leucogenys
ENSPPRG00000021387	MBD1	100	88.468	ENSNLEG00000011661	-	100	87.974	Nomascus_leucogenys
ENSPPRG00000021387	MBD1	100	73.806	ENSOPRG00000007647	MBD1	88	95.745	Ochotona_princeps
ENSPPRG00000021387	MBD1	99	75.704	ENSODEG00000018451	MBD1	97	76.408	Octodon_degus
ENSPPRG00000021387	MBD1	66	36.782	ENSONIG00000020289	mbd1b	52	33.487	Oreochromis_niloticus
ENSPPRG00000021387	MBD1	85	46.396	ENSOANG00000014593	-	100	49.245	Ornithorhynchus_anatinus
ENSPPRG00000021387	MBD1	100	84.177	ENSOCUG00000006554	MBD1	100	84.177	Oryctolagus_cuniculus
ENSPPRG00000021387	MBD1	100	85.335	ENSOGAG00000003784	MBD1	96	85.335	Otolemur_garnettii
ENSPPRG00000021387	MBD1	100	89.258	ENSOARG00000004218	MBD1	95	88.942	Ovis_aries
ENSPPRG00000021387	MBD1	100	87.809	ENSPPAG00000038886	MBD1	100	88.468	Pan_paniscus
ENSPPRG00000021387	MBD1	100	99.842	ENSPTIG00000021231	MBD1	100	99.842	Panthera_tigris_altaica
ENSPPRG00000021387	MBD1	100	87.816	ENSPTRG00000010021	MBD1	100	88.468	Pan_troglodytes
ENSPPRG00000021387	MBD1	100	87.975	ENSPANG00000010867	MBD1	100	88.449	Papio_anubis
ENSPPRG00000021387	MBD1	99	63.605	ENSPEMG00000022630	Mbd1	97	63.543	Peromyscus_maniculatus_bairdii
ENSPPRG00000021387	MBD1	96	47.735	ENSPCIG00000027937	-	79	47.644	Phascolarctos_cinereus
ENSPPRG00000021387	MBD1	61	53.846	ENSPMEG00000024145	mbd1b	52	51.546	Poecilia_mexicana
ENSPPRG00000021387	MBD1	100	89.127	ENSPPYG00000009158	MBD1	91	88.633	Pongo_abelii
ENSPPRG00000021387	MBD1	99	78.878	ENSPCAG00000001648	MBD1	93	88.258	Procavia_capensis
ENSPPRG00000021387	MBD1	100	89.127	ENSPCOG00000012450	MBD1	100	89.127	Propithecus_coquereli
ENSPPRG00000021387	MBD1	99	52.257	ENSRNOG00000024104	Mbd1	99	51.712	Rattus_norvegicus
ENSPPRG00000021387	MBD1	100	86.918	ENSRBIG00000041294	MBD1	100	87.455	Rhinopithecus_bieti
ENSPPRG00000021387	MBD1	100	87.658	ENSRROG00000032517	MBD1	100	88.138	Rhinopithecus_roxellana
ENSPPRG00000021387	MBD1	100	86.384	ENSSBOG00000027169	MBD1	100	85.930	Saimiri_boliviensis_boliviensis
ENSPPRG00000021387	MBD1	86	45.629	ENSSHAG00000003661	-	100	46.921	Sarcophilus_harrisii
ENSPPRG00000021387	MBD1	53	46.939	ENSSPAG00000021447	mbd1b	56	31.250	Stegastes_partitus
ENSPPRG00000021387	MBD1	100	90.706	ENSSSCG00000004516	MBD1	100	90.149	Sus_scrofa
ENSPPRG00000021387	MBD1	74	33.333	ENSTRUG00000013422	mbd1b	52	32.857	Takifugu_rubripes
ENSPPRG00000021387	MBD1	74	81.667	ENSTBEG00000012651	-	68	81.667	Tupaia_belangeri
ENSPPRG00000021387	MBD1	100	88.797	ENSTTRG00000015523	MBD1	100	88.797	Tursiops_truncatus
ENSPPRG00000021387	MBD1	100	93.245	ENSUAMG00000004752	MBD1	100	93.245	Ursus_americanus
ENSPPRG00000021387	MBD1	100	96.705	ENSUMAG00000002947	MBD1	100	96.705	Ursus_maritimus