EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPPRG00000023024 (Gene tree)
Gene ID: -
Gene Symbol: PRDM12
Alias: -
Full Name: PR/SET domain 12
Gene Type: protein_coding
Species: Panthera_pardus
Status: putative
Strand: Minus strand
Length: 14600 bases
Position: chrKV860355.1:2308792-2323391
Accession: 13997
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPPRP00000003063	zf-C2H2	PF00096.26	7.8e-13	1	2
ENSPPRP00000003063	zf-C2H2	PF00096.26	7.8e-13	2	2
ENSPPRP00000003063	zf-met	PF12874.7	8.5e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPPRT00000000620	PRDM12-201	1149	-	ENSPPRP00000003063	382 (aa)	-	-

Gene Model

Click here to download ENSPPRG00000023024's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPPRG00000023024's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPPRG00000023024	PRDM12	73	45.455	ENSPPRG00000001020	PRDM5	94	45.455

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPPRG00000023024	PRDM12	86	90.448	ENSG00000130711	PRDM12	100	86.141	Homo_sapiens
ENSPPRG00000023024	PRDM12	92	59.726	ENSAPOG00000018234	-	100	60.000	Acanthochromis_polyacanthus
ENSPPRG00000023024	PRDM12	91	69.761	ENSAPOG00000016051	prdm12b	98	69.761	Acanthochromis_polyacanthus
ENSPPRG00000023024	PRDM12	83	86.111	ENSAMEG00000016234	PRDM12	99	86.111	Ailuropoda_melanoleuca
ENSPPRG00000023024	PRDM12	92	69.152	ENSACIG00000005193	-	100	69.531	Amphilophus_citrinellus
ENSPPRG00000023024	PRDM12	85	73.851	ENSACIG00000019578	prdm12b	98	70.699	Amphilophus_citrinellus
ENSPPRG00000023024	PRDM12	91	70.968	ENSAOCG00000015040	prdm12b	98	70.968	Amphiprion_ocellaris
ENSPPRG00000023024	PRDM12	83	73.887	ENSAPEG00000022849	-	100	67.876	Amphiprion_percula
ENSPPRG00000023024	PRDM12	91	71.545	ENSAPEG00000015092	prdm12b	98	71.545	Amphiprion_percula
ENSPPRG00000023024	PRDM12	86	74.636	ENSATEG00000014595	-	99	74.636	Anabas_testudineus
ENSPPRG00000023024	PRDM12	87	90.909	ENSANAG00000020616	PRDM12	100	90.909	Aotus_nancymaae
ENSPPRG00000023024	PRDM12	92	72.176	ENSACLG00000011876	prdm12b	100	72.176	Astatotilapia_calliptera
ENSPPRG00000023024	PRDM12	83	74.927	ENSACLG00000007631	-	100	68.010	Astatotilapia_calliptera
ENSPPRG00000023024	PRDM12	84	80.597	ENSAMXG00000033665	prdm12b	100	75.733	Astyanax_mexicanus
ENSPPRG00000023024	PRDM12	92	72.626	ENSAMXG00000008540	PRDM12	97	72.626	Astyanax_mexicanus
ENSPPRG00000023024	PRDM12	86	90.746	ENSBTAG00000023797	PRDM12	100	87.845	Bos_taurus
ENSPPRG00000023024	PRDM12	86	90.746	ENSCJAG00000020540	PRDM12	100	88.089	Callithrix_jacchus
ENSPPRG00000023024	PRDM12	74	88.699	ENSCAFG00000023076	PRDM12	99	84.783	Canis_familiaris
ENSPPRG00000023024	PRDM12	92	87.397	ENSCAFG00020024046	PRDM12	100	87.397	Canis_lupus_dingo
ENSPPRG00000023024	PRDM12	92	87.879	ENSCHIG00000025005	PRDM12	100	87.879	Capra_hircus
ENSPPRG00000023024	PRDM12	87	84.164	ENSCPOG00000005901	PRDM12	100	84.164	Cavia_porcellus
ENSPPRG00000023024	PRDM12	86	90.746	ENSCCAG00000037485	PRDM12	100	87.363	Cebus_capucinus
ENSPPRG00000023024	PRDM12	86	90.746	ENSCATG00000020327	PRDM12	100	87.363	Cercocebus_atys
ENSPPRG00000023024	PRDM12	86	89.552	ENSCLAG00000005499	PRDM12	92	89.552	Chinchilla_lanigera
ENSPPRG00000023024	PRDM12	86	90.746	ENSCSAG00000014756	PRDM12	100	87.123	Chlorocebus_sabaeus
ENSPPRG00000023024	PRDM12	92	82.451	ENSCPBG00000022628	PRDM12	100	82.451	Chrysemys_picta_bellii
ENSPPRG00000023024	PRDM12	86	90.149	ENSCGRG00001015005	Prdm12	100	86.104	Cricetulus_griseus_chok1gshd
ENSPPRG00000023024	PRDM12	84	76.106	ENSCVAG00000017166	prdm12b	100	71.774	Cyprinodon_variegatus
ENSPPRG00000023024	PRDM12	84	70.739	ENSCVAG00000000944	-	100	66.076	Cyprinodon_variegatus
ENSPPRG00000023024	PRDM12	92	75.472	ENSDARG00000007430	prdm12b	100	75.472	Danio_rerio
ENSPPRG00000023024	PRDM12	85	90.149	ENSDNOG00000042302	PRDM12	99	86.740	Dasypus_novemcinctus
ENSPPRG00000023024	PRDM12	83	57.102	ENSEBUG00000016780	prdm12b	78	58.523	Eptatretus_burgeri
ENSPPRG00000023024	PRDM12	92	87.603	ENSEASG00005008472	PRDM12	100	87.603	Equus_asinus_asinus
ENSPPRG00000023024	PRDM12	87	90.616	ENSECAG00000005933	PRDM12	100	87.328	Equus_caballus
ENSPPRG00000023024	PRDM12	83	77.846	ENSELUG00000013674	PRDM12	89	77.846	Esox_lucius
ENSPPRG00000023024	PRDM12	92	73.656	ENSELUG00000009905	prdm12b	100	73.656	Esox_lucius
ENSPPRG00000023024	PRDM12	92	87.637	ENSFCAG00000043086	PRDM12	100	87.637	Felis_catus
ENSPPRG00000023024	PRDM12	92	82.730	ENSFALG00000001445	PRDM12	89	82.730	Ficedula_albicollis
ENSPPRG00000023024	PRDM12	92	67.519	ENSFHEG00000007746	-	100	67.775	Fundulus_heteroclitus
ENSPPRG00000023024	PRDM12	83	76.331	ENSFHEG00000003944	prdm12b	100	71.467	Fundulus_heteroclitus
ENSPPRG00000023024	PRDM12	85	75.749	ENSGMOG00000011797	prdm12b	98	74.212	Gadus_morhua
ENSPPRG00000023024	PRDM12	92	82.730	ENSGALG00000003895	PRDM12	100	82.730	Gallus_gallus
ENSPPRG00000023024	PRDM12	85	76.471	ENSGAFG00000010827	prdm12b	100	72.074	Gambusia_affinis
ENSPPRG00000023024	PRDM12	92	72.922	ENSGACG00000016713	prdm12b	100	72.922	Gasterosteus_aculeatus
ENSPPRG00000023024	PRDM12	92	82.730	ENSGAGG00000014083	PRDM12	100	82.730	Gopherus_agassizii
ENSPPRG00000023024	PRDM12	86	90.149	ENSGGOG00000010568	PRDM12	100	86.104	Gorilla_gorilla
ENSPPRG00000023024	PRDM12	92	71.467	ENSHBUG00000022878	prdm12b	100	71.467	Haplochromis_burtoni
ENSPPRG00000023024	PRDM12	83	74.927	ENSHBUG00000022537	-	93	68.010	Haplochromis_burtoni
ENSPPRG00000023024	PRDM12	86	89.254	ENSHGLG00000013939	PRDM12	100	85.246	Heterocephalus_glaber_female
ENSPPRG00000023024	PRDM12	83	74.927	ENSHCOG00000003663	prdm12b	100	69.543	Hippocampus_comes
ENSPPRG00000023024	PRDM12	92	68.681	ENSHCOG00000021167	-	100	68.681	Hippocampus_comes
ENSPPRG00000023024	PRDM12	91	71.111	ENSIPUG00000019544	PRDM12	98	71.111	Ictalurus_punctatus
ENSPPRG00000023024	PRDM12	92	75.067	ENSIPUG00000017053	prdm12b	100	75.335	Ictalurus_punctatus
ENSPPRG00000023024	PRDM12	87	90.560	ENSSTOG00000005986	PRDM12	88	90.560	Ictidomys_tridecemlineatus
ENSPPRG00000023024	PRDM12	85	90.030	ENSJJAG00000005424	Prdm12	100	90.030	Jaculus_jaculus
ENSPPRG00000023024	PRDM12	91	70.994	ENSKMAG00000021205	-	94	73.043	Kryptolebias_marmoratus
ENSPPRG00000023024	PRDM12	84	72.981	ENSKMAG00000016921	prdm12b	100	67.241	Kryptolebias_marmoratus
ENSPPRG00000023024	PRDM12	83	77.313	ENSLBEG00000017769	prdm12b	100	71.240	Labrus_bergylta
ENSPPRG00000023024	PRDM12	92	69.091	ENSLBEG00000007776	-	100	69.351	Labrus_bergylta
ENSPPRG00000023024	PRDM12	92	80.726	ENSLACG00000017560	PRDM12	99	80.726	Latimeria_chalumnae
ENSPPRG00000023024	PRDM12	92	76.648	ENSLOCG00000005429	prdm12b	99	76.923	Lepisosteus_oculatus
ENSPPRG00000023024	PRDM12	86	90.029	ENSLAFG00000006979	PRDM12	94	89.744	Loxodonta_africana
ENSPPRG00000023024	PRDM12	86	90.746	ENSMFAG00000040322	PRDM12	100	86.413	Macaca_fascicularis
ENSPPRG00000023024	PRDM12	86	90.746	ENSMNEG00000037234	PRDM12	100	87.363	Macaca_nemestrina
ENSPPRG00000023024	PRDM12	83	75.074	ENSMAMG00000018988	-	100	67.430	Mastacembelus_armatus
ENSPPRG00000023024	PRDM12	92	71.543	ENSMAMG00000013212	prdm12b	100	71.809	Mastacembelus_armatus
ENSPPRG00000023024	PRDM12	83	74.927	ENSMZEG00005000415	PRDM12	100	67.669	Maylandia_zebra
ENSPPRG00000023024	PRDM12	90	83.807	ENSMGAG00000005438	PRDM12	98	83.807	Meleagris_gallopavo
ENSPPRG00000023024	PRDM12	87	90.058	ENSMAUG00000013040	Prdm12	93	90.058	Mesocricetus_auratus
ENSPPRG00000023024	PRDM12	92	87.879	ENSMICG00000015480	PRDM12	100	87.879	Microcebus_murinus
ENSPPRG00000023024	PRDM12	88	89.275	ENSMOCG00000021026	Prdm12	93	90.058	Microtus_ochrogaster
ENSPPRG00000023024	PRDM12	92	84.680	ENSMODG00000012108	PRDM12	100	84.680	Monodelphis_domestica
ENSPPRG00000023024	PRDM12	92	61.290	ENSMALG00000021901	prdm12b	99	61.290	Monopterus_albus
ENSPPRG00000023024	PRDM12	86	89.851	MGP_CAROLIEiJ_G0023414	Prdm12	100	86.066	Mus_caroli
ENSPPRG00000023024	PRDM12	86	89.851	ENSMUSG00000079466	Prdm12	100	86.066	Mus_musculus
ENSPPRG00000023024	PRDM12	86	89.851	MGP_PahariEiJ_G0024871	Prdm12	100	86.066	Mus_pahari
ENSPPRG00000023024	PRDM12	86	89.851	MGP_SPRETEiJ_G0024331	Prdm12	100	86.066	Mus_spretus
ENSPPRG00000023024	PRDM12	84	89.329	ENSNGAG00000018480	Prdm12	100	84.958	Nannospalax_galili
ENSPPRG00000023024	PRDM12	92	70.899	ENSNBRG00000006727	prdm12b	100	70.899	Neolamprologus_brichardi
ENSPPRG00000023024	PRDM12	92	67.751	ENSNBRG00000024312	-	100	67.751	Neolamprologus_brichardi
ENSPPRG00000023024	PRDM12	92	82.682	ENSMEUG00000003828	PRDM12	100	82.682	Notamacropus_eugenii
ENSPPRG00000023024	PRDM12	85	89.728	ENSOPRG00000008680	PRDM12	100	89.728	Ochotona_princeps
ENSPPRG00000023024	PRDM12	88	90.116	ENSODEG00000016282	PRDM12	64	90.116	Octodon_degus
ENSPPRG00000023024	PRDM12	56	78.829	ENSOANG00000001043	PRDM12	100	78.829	Ornithorhynchus_anatinus
ENSPPRG00000023024	PRDM12	80	84.076	ENSOCUG00000008241	PRDM12	100	84.076	Oryctolagus_cuniculus
ENSPPRG00000023024	PRDM12	83	72.807	ENSORLG00000017558	-	100	67.089	Oryzias_latipes
ENSPPRG00000023024	PRDM12	92	70.526	ENSORLG00000007114	prdm12b	100	70.526	Oryzias_latipes
ENSPPRG00000023024	PRDM12	91	71.123	ENSORLG00020019565	prdm12b	98	71.123	Oryzias_latipes_hni
ENSPPRG00000023024	PRDM12	83	72.595	ENSORLG00020013167	-	100	66.919	Oryzias_latipes_hni
ENSPPRG00000023024	PRDM12	85	74.425	ENSORLG00015007621	prdm12b	100	70.000	Oryzias_latipes_hsok
ENSPPRG00000023024	PRDM12	83	72.807	ENSORLG00015003435	-	100	67.089	Oryzias_latipes_hsok
ENSPPRG00000023024	PRDM12	92	68.848	ENSOMEG00000007762	-	100	69.110	Oryzias_melastigma
ENSPPRG00000023024	PRDM12	91	70.557	ENSOMEG00000004134	prdm12b	98	70.899	Oryzias_melastigma
ENSPPRG00000023024	PRDM12	85	91.018	ENSOGAG00000007557	PRDM12	100	91.018	Otolemur_garnettii
ENSPPRG00000023024	PRDM12	73	88.542	ENSPPAG00000031506	-	97	88.542	Pan_paniscus
ENSPPRG00000023024	PRDM12	86	90.448	ENSPTRG00000043324	-	100	86.376	Pan_troglodytes
ENSPPRG00000023024	PRDM12	86	90.448	ENSPTRG00000021475	PRDM12	100	86.376	Pan_troglodytes
ENSPPRG00000023024	PRDM12	86	90.746	ENSPANG00000025967	PRDM12	100	87.363	Papio_anubis
ENSPPRG00000023024	PRDM12	87	73.410	ENSPKIG00000004305	PRDM12	99	72.934	Paramormyrops_kingsleyae
ENSPPRG00000023024	PRDM12	92	75.603	ENSPKIG00000007228	prdm12b	100	75.871	Paramormyrops_kingsleyae
ENSPPRG00000023024	PRDM12	92	81.894	ENSPSIG00000006739	PRDM12	100	81.894	Pelodiscus_sinensis
ENSPPRG00000023024	PRDM12	85	74.184	ENSPMGG00000002356	-	100	67.010	Periophthalmus_magnuspinnatus
ENSPPRG00000023024	PRDM12	92	71.774	ENSPMGG00000008867	prdm12b	100	72.043	Periophthalmus_magnuspinnatus
ENSPPRG00000023024	PRDM12	89	86.819	ENSPEMG00000009969	Prdm12	95	86.819	Peromyscus_maniculatus_bairdii
ENSPPRG00000023024	PRDM12	92	84.958	ENSPCIG00000024119	PRDM12	100	84.958	Phascolarctos_cinereus
ENSPPRG00000023024	PRDM12	92	72.312	ENSPFOG00000019841	prdm12b	100	72.312	Poecilia_formosa
ENSPPRG00000023024	PRDM12	84	77.151	ENSPLAG00000016626	prdm12b	98	71.968	Poecilia_latipinna
ENSPPRG00000023024	PRDM12	82	76.061	ENSPMEG00000016698	prdm12b	98	71.191	Poecilia_mexicana
ENSPPRG00000023024	PRDM12	88	67.787	ENSPREG00000003211	-	96	67.787	Poecilia_reticulata
ENSPPRG00000023024	PRDM12	84	77.151	ENSPREG00000015073	prdm12b	100	71.316	Poecilia_reticulata
ENSPPRG00000023024	PRDM12	89	89.080	ENSPPYG00000019694	PRDM12	99	89.080	Pongo_abelii
ENSPPRG00000023024	PRDM12	92	87.193	ENSPCOG00000022255	PRDM12	100	87.193	Propithecus_coquereli
ENSPPRG00000023024	PRDM12	87	90.936	ENSPVAG00000001511	PRDM12	93	90.936	Pteropus_vampyrus
ENSPPRG00000023024	PRDM12	83	74.927	ENSPNYG00000013589	-	100	67.669	Pundamilia_nyererei
ENSPPRG00000023024	PRDM12	92	70.822	ENSPNYG00000009607	prdm12b	100	70.822	Pundamilia_nyererei
ENSPPRG00000023024	PRDM12	83	75.684	ENSPNAG00000013396	PRDM12	97	70.799	Pygocentrus_nattereri
ENSPPRG00000023024	PRDM12	84	81.194	ENSPNAG00000024532	prdm12b	100	76.676	Pygocentrus_nattereri
ENSPPRG00000023024	PRDM12	86	89.851	ENSRNOG00000009218	Prdm12	100	86.066	Rattus_norvegicus
ENSPPRG00000023024	PRDM12	81	90.252	ENSRBIG00000042712	PRDM12	96	84.857	Rhinopithecus_bieti
ENSPPRG00000023024	PRDM12	82	90.373	ENSRROG00000043554	PRDM12	100	90.373	Rhinopithecus_roxellana
ENSPPRG00000023024	PRDM12	92	84.167	ENSSHAG00000015972	PRDM12	100	84.167	Sarcophilus_harrisii
ENSPPRG00000023024	PRDM12	84	73.864	ENSSMAG00000003754	prdm12b	100	69.643	Scophthalmus_maximus
ENSPPRG00000023024	PRDM12	92	69.792	ENSSDUG00000023498	prdm12b	100	69.792	Seriola_dumerili
ENSPPRG00000023024	PRDM12	87	75.731	ENSSDUG00000019071	-	95	75.731	Seriola_dumerili
ENSPPRG00000023024	PRDM12	92	70.157	ENSSLDG00000009557	prdm12b	100	70.419	Seriola_lalandi_dorsalis
ENSPPRG00000023024	PRDM12	92	73.407	ENSSLDG00000013562	-	100	73.407	Seriola_lalandi_dorsalis
ENSPPRG00000023024	PRDM12	92	82.451	ENSSPUG00000013424	PRDM12	100	82.451	Sphenodon_punctatus
ENSPPRG00000023024	PRDM12	91	70.777	ENSSPAG00000018824	prdm12b	98	70.777	Stegastes_partitus
ENSPPRG00000023024	PRDM12	83	77.019	ENSSPAG00000022420	-	100	70.241	Stegastes_partitus
ENSPPRG00000023024	PRDM12	92	87.397	ENSSSCG00000005703	PRDM12	100	87.397	Sus_scrofa
ENSPPRG00000023024	PRDM12	92	73.046	ENSTRUG00000018659	prdm12b	100	73.046	Takifugu_rubripes
ENSPPRG00000023024	PRDM12	92	69.672	ENSTRUG00000013239	-	100	69.945	Takifugu_rubripes
ENSPPRG00000023024	PRDM12	92	73.387	ENSTNIG00000009020	prdm12b	99	73.387	Tetraodon_nigroviridis
ENSPPRG00000023024	PRDM12	92	69.505	ENSTNIG00000005859	-	99	69.505	Tetraodon_nigroviridis
ENSPPRG00000023024	PRDM12	86	91.045	ENSUAMG00000009653	PRDM12	96	89.368	Ursus_americanus
ENSPPRG00000023024	PRDM12	85	90.991	ENSVVUG00000027662	PRDM12	79	90.991	Vulpes_vulpes
ENSPPRG00000023024	PRDM12	84	76.855	ENSXCOG00000002836	prdm12b	100	71.925	Xiphophorus_couchianus
ENSPPRG00000023024	PRDM12	84	73.021	ENSXMAG00000028012	-	100	67.352	Xiphophorus_maculatus
ENSPPRG00000023024	PRDM12	83	76.716	ENSXMAG00000005537	prdm12b	100	71.277	Xiphophorus_maculatus