EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPPRG00000024804 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Panthera_pardus
Status: putative
Strand: Minus strand
Length: 5154 bases
Position: chrKV860326.1:5513613-5518766
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPPRP00000000474	LSM	PF01423.22	3.9e-09	1	1
ENSPPRP00000000476	LSM	PF01423.22	5e-09	1	1
ENSPPRP00000000472	LSM	PF01423.22	6.9e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPPRT00000034748	-	264	-	ENSPPRP00000000472	87 (aa)	-	-
ENSPPRT00000034752	-	213	-	ENSPPRP00000000476	70 (aa)	-	-
ENSPPRT00000034750	-	246	-	ENSPPRP00000000474	81 (aa)	-	-

Gene Model

Click here to download ENSPPRG00000024804's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPPRG00000024804's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPPRG00000024804	-	97	52.174	ENSPPRG00000018908	-	78	52.174

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPPRG00000024804	-	90	67.123	ENSG00000125835	SNRPB	99	67.123	Homo_sapiens
ENSPPRG00000024804	-	66	67.391	ENSAPEG00000008846	-	73	72.917	Amphiprion_percula
ENSPPRG00000024804	-	74	57.692	ENSBTAG00000024548	-	78	55.172	Bos_taurus
ENSPPRG00000024804	-	83	68.966	ENSCJAG00000041673	-	71	76.364	Callithrix_jacchus
ENSPPRG00000024804	-	63	77.273	ENSCAFG00020013247	-	56	76.596	Canis_lupus_dingo
ENSPPRG00000024804	-	63	75.000	ENSCAFG00020003638	-	91	52.857	Canis_lupus_dingo
ENSPPRG00000024804	-	67	74.468	ENSCAFG00020020370	-	100	56.000	Canis_lupus_dingo
ENSPPRG00000024804	-	76	56.604	ENSCHIG00000024610	-	79	56.604	Capra_hircus
ENSPPRG00000024804	-	73	70.588	ENSCCAG00000035140	-	89	72.549	Cebus_capucinus
ENSPPRG00000024804	-	86	70.492	ENSCANG00000019461	SNRPB	87	61.972	Colobus_angolensis_palliatus
ENSPPRG00000024804	-	93	87.654	ENSFCAG00000041049	-	100	87.654	Felis_catus
ENSPPRG00000024804	-	89	48.387	ENSFHEG00000006534	-	62	62.222	Fundulus_heteroclitus
ENSPPRG00000024804	-	74	76.923	ENSMAUG00000006516	-	89	75.862	Mesocricetus_auratus
ENSPPRG00000024804	-	86	70.492	ENSMAUG00000020656	-	78	70.492	Mesocricetus_auratus
ENSPPRG00000024804	-	90	63.014	MGP_CAROLIEiJ_G0024293	Snrpb	99	63.014	Mus_caroli
ENSPPRG00000024804	-	90	63.014	ENSMUSG00000027404	Snrpb	99	63.014	Mus_musculus
ENSPPRG00000024804	-	90	63.014	MGP_PahariEiJ_G0025738	Snrpb	99	63.014	Mus_pahari
ENSPPRG00000024804	-	73	78.431	MGP_SPRETEiJ_G0025213	Snrpb	73	78.846	Mus_spretus
ENSPPRG00000024804	-	79	69.091	ENSPMAG00000004923	SNRPB	66	67.797	Petromyzon_marinus
ENSPPRG00000024804	-	73	78.431	ENSRNOG00000006961	Snrpb	93	66.667	Rattus_norvegicus
ENSPPRG00000024804	-	71	66.000	ENSUAMG00000016301	-	74	61.818	Ursus_americanus
ENSPPRG00000024804	-	71	66.000	ENSUMAG00000011571	-	63	65.385	Ursus_maritimus
ENSPPRG00000024804	-	93	60.000	ENSVVUG00000011423	-	97	60.000	Vulpes_vulpes