EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSPPYG00000000427 (Gene tree)
Gene ID: 100442965
Gene Symbol: SMG7
Alias: C1orf16|EST1C|KIAA0250|SGA56M|SMG-7
Full Name: SMG7%2C nonsense mediated mRNA decay factor
Gene Type: protein_coding
Species: Pongo_abelii
Status: putative
Strand: Minus strand
Length: 85169 bases
Position: chr1:67102830-67187998
Accession: 100442965
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPPYP00000000485	EST1	PF10374.9	5.1e-25	1	1
ENSPPYP00000000485	EST1_DNA_bind	PF10373.9	6.4e-56	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPPYT00000000505	SMG7-201	5694	XM_024249678	ENSPPYP00000000485	1137 (aa)	XP_024105446	H2N4F3

Gene Model

Click here to download ENSPPYG00000000427's gene model file

Pathways

Pathway ID	Pathway Name	Source
pon03015	mRNA surveillance pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPPYG00000000427's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPPYG00000000427	SMG7	100	99.736	ENSG00000116698	SMG7	100	99.736	Homo_sapiens
ENSPPYG00000000427	SMG7	88	74.735	ENSAPOG00000009611	smg7	95	74.735	Acanthochromis_polyacanthus
ENSPPYG00000000427	SMG7	99	97.166	ENSAMEG00000002357	SMG7	99	97.166	Ailuropoda_melanoleuca
ENSPPYG00000000427	SMG7	97	64.439	ENSACIG00000015152	smg7	100	65.062	Amphilophus_citrinellus
ENSPPYG00000000427	SMG7	99	66.467	ENSAOCG00000013538	smg7	99	67.009	Amphiprion_ocellaris
ENSPPYG00000000427	SMG7	99	66.325	ENSAPEG00000007851	smg7	99	66.866	Amphiprion_percula
ENSPPYG00000000427	SMG7	99	65.874	ENSATEG00000006931	smg7	99	66.384	Anabas_testudineus
ENSPPYG00000000427	SMG7	100	89.151	ENSAPLG00000015811	SMG7	100	88.976	Anas_platyrhynchos
ENSPPYG00000000427	SMG7	100	83.709	ENSACAG00000014989	SMG7	100	84.211	Anolis_carolinensis
ENSPPYG00000000427	SMG7	100	98.857	ENSANAG00000028114	SMG7	100	98.857	Aotus_nancymaae
ENSPPYG00000000427	SMG7	99	65.506	ENSACLG00000022079	smg7	99	66.495	Astatotilapia_calliptera
ENSPPYG00000000427	SMG7	99	67.913	ENSAMXG00000020809	smg7	99	68.202	Astyanax_mexicanus
ENSPPYG00000000427	SMG7	100	96.394	ENSBTAG00000008003	SMG7	100	96.394	Bos_taurus
ENSPPYG00000000427	SMG7	100	98.593	ENSCJAG00000005135	SMG7	100	98.593	Callithrix_jacchus
ENSPPYG00000000427	SMG7	99	89.059	ENSCAFG00000013276	SMG7	97	88.974	Canis_familiaris
ENSPPYG00000000427	SMG7	99	97.257	ENSCAFG00020015475	SMG7	99	97.257	Canis_lupus_dingo
ENSPPYG00000000427	SMG7	99	88.644	ENSCHIG00000018192	SMG7	99	88.644	Capra_hircus
ENSPPYG00000000427	SMG7	100	97.713	ENSTSYG00000002667	SMG7	100	97.713	Carlito_syrichta
ENSPPYG00000000427	SMG7	99	89.228	ENSCPOG00000008906	SMG7	99	88.380	Cavia_porcellus
ENSPPYG00000000427	SMG7	100	98.945	ENSCCAG00000028596	SMG7	100	98.945	Cebus_capucinus
ENSPPYG00000000427	SMG7	100	99.736	ENSCATG00000011063	SMG7	100	99.736	Cercocebus_atys
ENSPPYG00000000427	SMG7	100	96.922	ENSCLAG00000010751	SMG7	100	96.922	Chinchilla_lanigera
ENSPPYG00000000427	SMG7	99	91.349	ENSCSAG00000012654	SMG7	97	91.349	Chlorocebus_sabaeus
ENSPPYG00000000427	SMG7	92	85.910	ENSCHOG00000010522	SMG7	93	86.276	Choloepus_hoffmanni
ENSPPYG00000000427	SMG7	100	91.937	ENSCPBG00000015724	SMG7	100	91.762	Chrysemys_picta_bellii
ENSPPYG00000000427	SMG7	99	99.645	ENSCANG00000015680	SMG7	99	99.645	Colobus_angolensis_palliatus
ENSPPYG00000000427	SMG7	100	95.339	ENSCGRG00001013705	Smg7	100	95.339	Cricetulus_griseus_chok1gshd
ENSPPYG00000000427	SMG7	99	95.297	ENSCGRG00000018401	Smg7	100	95.297	Cricetulus_griseus_crigri
ENSPPYG00000000427	SMG7	98	64.686	ENSCVAG00000011842	smg7	100	64.513	Cyprinodon_variegatus
ENSPPYG00000000427	SMG7	99	67.848	ENSDARG00000060767	smg7	99	67.934	Danio_rerio
ENSPPYG00000000427	SMG7	100	88.964	ENSDORG00000007331	Smg7	100	88.964	Dipodomys_ordii
ENSPPYG00000000427	SMG7	97	88.435	ENSETEG00000002654	SMG7	100	88.435	Echinops_telfairi
ENSPPYG00000000427	SMG7	100	90.143	ENSEASG00005006524	SMG7	100	90.143	Equus_asinus_asinus
ENSPPYG00000000427	SMG7	99	94.066	ENSECAG00000004313	SMG7	97	94.066	Equus_caballus
ENSPPYG00000000427	SMG7	97	87.837	ENSEEUG00000002024	SMG7	94	87.837	Erinaceus_europaeus
ENSPPYG00000000427	SMG7	99	63.599	ENSELUG00000010293	smg7	99	66.048	Esox_lucius
ENSPPYG00000000427	SMG7	99	93.711	ENSFCAG00000010900	SMG7	99	93.500	Felis_catus
ENSPPYG00000000427	SMG7	98	82.313	ENSFALG00000003047	SMG7	100	82.228	Ficedula_albicollis
ENSPPYG00000000427	SMG7	99	89.114	ENSFDAG00000012121	SMG7	99	89.384	Fukomys_damarensis
ENSPPYG00000000427	SMG7	99	64.691	ENSFHEG00000011073	smg7	99	64.055	Fundulus_heteroclitus
ENSPPYG00000000427	SMG7	72	74.811	ENSGMOG00000004916	smg7	76	74.953	Gadus_morhua
ENSPPYG00000000427	SMG7	100	89.510	ENSGALG00000004667	SMG7	100	89.336	Gallus_gallus
ENSPPYG00000000427	SMG7	99	64.741	ENSGAFG00000019000	smg7	99	64.569	Gambusia_affinis
ENSPPYG00000000427	SMG7	97	62.621	ENSGACG00000001634	smg7	99	63.357	Gasterosteus_aculeatus
ENSPPYG00000000427	SMG7	100	99.648	ENSGGOG00000002342	SMG7	100	99.648	Gorilla_gorilla
ENSPPYG00000000427	SMG7	99	64.773	ENSHBUG00000003726	smg7	99	65.320	Haplochromis_burtoni
ENSPPYG00000000427	SMG7	100	97.449	ENSHGLG00000009353	SMG7	100	97.449	Heterocephalus_glaber_female
ENSPPYG00000000427	SMG7	100	82.224	ENSHGLG00100004878	-	100	82.224	Heterocephalus_glaber_male
ENSPPYG00000000427	SMG7	100	97.537	ENSHGLG00100009637	-	100	97.537	Heterocephalus_glaber_male
ENSPPYG00000000427	SMG7	99	68.412	ENSIPUG00000016997	smg7	99	68.674	Ictalurus_punctatus
ENSPPYG00000000427	SMG7	100	94.195	ENSSTOG00000000401	SMG7	100	94.195	Ictidomys_tridecemlineatus
ENSPPYG00000000427	SMG7	100	87.869	ENSJJAG00000012351	Smg7	100	87.869	Jaculus_jaculus
ENSPPYG00000000427	SMG7	97	62.423	ENSKMAG00000004900	smg7	100	62.511	Kryptolebias_marmoratus
ENSPPYG00000000427	SMG7	52	63.000	ENSLBEG00000005220	-	75	63.000	Labrus_bergylta
ENSPPYG00000000427	SMG7	99	66.350	ENSLBEG00000002983	smg7	99	66.523	Labrus_bergylta
ENSPPYG00000000427	SMG7	99	75.716	ENSLACG00000000972	SMG7	99	75.694	Latimeria_chalumnae
ENSPPYG00000000427	SMG7	99	66.750	ENSLOCG00000002010	smg7	99	66.998	Lepisosteus_oculatus
ENSPPYG00000000427	SMG7	99	89.643	ENSLAFG00000008186	SMG7	99	89.643	Loxodonta_africana
ENSPPYG00000000427	SMG7	99	95.483	ENSMFAG00000031653	SMG7	100	95.284	Macaca_fascicularis
ENSPPYG00000000427	SMG7	99	98.849	ENSMMUG00000018458	SMG7	99	98.849	Macaca_mulatta
ENSPPYG00000000427	SMG7	100	99.736	ENSMNEG00000034798	SMG7	100	99.736	Macaca_nemestrina
ENSPPYG00000000427	SMG7	100	99.736	ENSMLEG00000037170	SMG7	100	99.736	Mandrillus_leucophaeus
ENSPPYG00000000427	SMG7	88	65.344	ENSMAMG00000018733	smg7	85	65.571	Mastacembelus_armatus
ENSPPYG00000000427	SMG7	99	65.983	ENSMZEG00005015247	smg7	99	66.068	Maylandia_zebra
ENSPPYG00000000427	SMG7	97	89.398	ENSMGAG00000001561	SMG7	98	89.218	Meleagris_gallopavo
ENSPPYG00000000427	SMG7	100	95.602	ENSMAUG00000019484	Smg7	100	95.602	Mesocricetus_auratus
ENSPPYG00000000427	SMG7	100	98.681	ENSMICG00000007145	SMG7	100	98.681	Microcebus_murinus
ENSPPYG00000000427	SMG7	100	95.602	ENSMOCG00000020748	Smg7	100	95.602	Microtus_ochrogaster
ENSPPYG00000000427	SMG7	99	64.298	ENSMMOG00000001524	smg7	99	64.589	Mola_mola
ENSPPYG00000000427	SMG7	92	93.264	ENSMODG00000007139	SMG7	99	93.264	Monodelphis_domestica
ENSPPYG00000000427	SMG7	99	65.722	ENSMALG00000000061	smg7	93	66.352	Monopterus_albus
ENSPPYG00000000427	SMG7	100	95.251	MGP_CAROLIEiJ_G0014704	Smg7	100	94.899	Mus_caroli
ENSPPYG00000000427	SMG7	100	95.163	ENSMUSG00000042772	Smg7	100	95.163	Mus_musculus
ENSPPYG00000000427	SMG7	100	95.339	MGP_PahariEiJ_G0027940	Smg7	100	95.339	Mus_pahari
ENSPPYG00000000427	SMG7	100	95.251	MGP_SPRETEiJ_G0015511	Smg7	100	95.251	Mus_spretus
ENSPPYG00000000427	SMG7	98	88.955	ENSMPUG00000011732	SMG7	97	88.870	Mustela_putorius_furo
ENSPPYG00000000427	SMG7	99	88.974	ENSMLUG00000015417	SMG7	99	88.974	Myotis_lucifugus
ENSPPYG00000000427	SMG7	100	96.482	ENSNGAG00000009836	Smg7	100	96.482	Nannospalax_galili
ENSPPYG00000000427	SMG7	98	61.478	ENSNBRG00000024343	smg7	99	62.150	Neolamprologus_brichardi
ENSPPYG00000000427	SMG7	100	99.912	ENSNLEG00000018018	SMG7	100	99.912	Nomascus_leucogenys
ENSPPYG00000000427	SMG7	70	93.089	ENSMEUG00000004681	SMG7	73	93.089	Notamacropus_eugenii
ENSPPYG00000000427	SMG7	96	78.265	ENSOPRG00000013942	SMG7	96	78.089	Ochotona_princeps
ENSPPYG00000000427	SMG7	100	97.449	ENSODEG00000010390	SMG7	100	97.449	Octodon_degus
ENSPPYG00000000427	SMG7	99	65.114	ENSONIG00000000277	smg7	99	66.096	Oreochromis_niloticus
ENSPPYG00000000427	SMG7	98	83.703	ENSOANG00000000994	SMG7	100	83.959	Ornithorhynchus_anatinus
ENSPPYG00000000427	SMG7	99	82.697	ENSOCUG00000005887	SMG7	92	82.867	Oryctolagus_cuniculus
ENSPPYG00000000427	SMG7	99	63.762	ENSORLG00000007314	smg7	70	92.763	Oryzias_latipes
ENSPPYG00000000427	SMG7	99	64.193	ENSORLG00020015779	smg7	99	64.107	Oryzias_latipes_hni
ENSPPYG00000000427	SMG7	99	64.058	ENSORLG00015012289	smg7	99	63.801	Oryzias_latipes_hsok
ENSPPYG00000000427	SMG7	99	62.331	ENSOMEG00000002328	smg7	99	62.331	Oryzias_melastigma
ENSPPYG00000000427	SMG7	97	88.338	ENSOGAG00000003107	SMG7	94	88.251	Otolemur_garnettii
ENSPPYG00000000427	SMG7	98	92.404	ENSOARG00000001352	SMG7	100	92.404	Ovis_aries
ENSPPYG00000000427	SMG7	100	99.912	ENSPPAG00000031619	SMG7	100	99.912	Pan_paniscus
ENSPPYG00000000427	SMG7	100	98.065	ENSPPRG00000011222	SMG7	100	98.065	Panthera_pardus
ENSPPYG00000000427	SMG7	96	93.712	ENSPTIG00000007242	SMG7	100	93.712	Panthera_tigris_altaica
ENSPPYG00000000427	SMG7	100	99.912	ENSPTRG00000001764	SMG7	100	99.912	Pan_troglodytes
ENSPPYG00000000427	SMG7	100	99.736	ENSPANG00000004520	SMG7	100	99.736	Papio_anubis
ENSPPYG00000000427	SMG7	99	64.969	ENSPKIG00000007242	smg7	99	65.993	Paramormyrops_kingsleyae
ENSPPYG00000000427	SMG7	98	90.893	ENSPSIG00000012201	SMG7	100	90.625	Pelodiscus_sinensis
ENSPPYG00000000427	SMG7	71	43.632	ENSPMGG00000021833	smg7	98	43.986	Periophthalmus_magnuspinnatus
ENSPPYG00000000427	SMG7	99	92.199	ENSPEMG00000011315	Smg7	99	92.199	Peromyscus_maniculatus_bairdii
ENSPPYG00000000427	SMG7	100	93.761	ENSPCIG00000003786	SMG7	100	93.585	Phascolarctos_cinereus
ENSPPYG00000000427	SMG7	99	62.015	ENSPFOG00000019219	smg7	99	61.932	Poecilia_formosa
ENSPPYG00000000427	SMG7	99	64.858	ENSPLAG00000001446	smg7	99	64.686	Poecilia_latipinna
ENSPPYG00000000427	SMG7	96	64.146	ENSPMEG00000005218	smg7	99	63.968	Poecilia_mexicana
ENSPPYG00000000427	SMG7	87	61.820	ENSPREG00000019039	smg7	91	61.858	Poecilia_reticulata
ENSPPYG00000000427	SMG7	95	77.965	ENSPCAG00000008360	SMG7	94	77.965	Procavia_capensis
ENSPPYG00000000427	SMG7	100	94.635	ENSPCOG00000011996	SMG7	100	94.635	Propithecus_coquereli
ENSPPYG00000000427	SMG7	92	83.242	ENSPVAG00000000851	SMG7	89	83.242	Pteropus_vampyrus
ENSPPYG00000000427	SMG7	99	65.979	ENSPNYG00000007643	smg7	99	66.351	Pundamilia_nyererei
ENSPPYG00000000427	SMG7	99	68.658	ENSPNAG00000011374	smg7	99	68.398	Pygocentrus_nattereri
ENSPPYG00000000427	SMG7	100	95.255	ENSRNOG00000027962	Smg7	100	95.255	Rattus_norvegicus
ENSPPYG00000000427	SMG7	100	99.648	ENSRBIG00000036316	SMG7	100	99.648	Rhinopithecus_bieti
ENSPPYG00000000427	SMG7	100	99.648	ENSRROG00000035719	SMG7	100	99.648	Rhinopithecus_roxellana
ENSPPYG00000000427	SMG7	100	94.811	ENSSBOG00000023454	SMG7	100	94.811	Saimiri_boliviensis_boliviensis
ENSPPYG00000000427	SMG7	100	93.240	ENSSHAG00000013147	SMG7	100	92.976	Sarcophilus_harrisii
ENSPPYG00000000427	SMG7	99	69.546	ENSSFOG00015017252	smg7	99	69.922	Scleropages_formosus
ENSPPYG00000000427	SMG7	99	66.178	ENSSMAG00000006067	smg7	99	66.150	Scophthalmus_maximus
ENSPPYG00000000427	SMG7	64	72.988	ENSSDUG00000017543	smg7	99	66.019	Seriola_dumerili
ENSPPYG00000000427	SMG7	99	90.548	ENSSPUG00000002064	SMG7	99	90.371	Sphenodon_punctatus
ENSPPYG00000000427	SMG7	100	66.149	ENSSPAG00000008733	smg7	100	66.064	Stegastes_partitus
ENSPPYG00000000427	SMG7	100	93.843	ENSSSCG00000015558	SMG7	100	93.843	Sus_scrofa
ENSPPYG00000000427	SMG7	99	89.427	ENSTGUG00000003928	SMG7	100	89.339	Taeniopygia_guttata
ENSPPYG00000000427	SMG7	99	59.350	ENSTNIG00000002802	smg7	99	59.299	Tetraodon_nigroviridis
ENSPPYG00000000427	SMG7	77	93.264	ENSTBEG00000003220	SMG7	71	96.237	Tupaia_belangeri
ENSPPYG00000000427	SMG7	96	89.308	ENSTTRG00000014778	SMG7	94	89.308	Tursiops_truncatus
ENSPPYG00000000427	SMG7	96	93.607	ENSUAMG00000017473	SMG7	100	93.607	Ursus_americanus
ENSPPYG00000000427	SMG7	96	93.607	ENSUMAG00000016389	SMG7	100	93.607	Ursus_maritimus
ENSPPYG00000000427	SMG7	100	93.755	ENSVVUG00000008976	SMG7	100	93.755	Vulpes_vulpes
ENSPPYG00000000427	SMG7	100	71.057	ENSXETG00000012528	smg7	100	71.032	Xenopus_tropicalis
ENSPPYG00000000427	SMG7	99	64.464	ENSXMAG00000007123	smg7	99	64.635	Xiphophorus_maculatus