EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPPYG00000000490 (Gene tree)
Gene ID: -
Gene Symbol: RC3H1
Alias: KIAA2025|RNF198|RP5-1198E17.5|roquin
Full Name: ring finger and CCCH-type domains 1
Gene Type: protein_coding
Species: Pongo_abelii
Status: putative
Strand: Plus strand
Length: 62100 bases
Position: chr1:76985612-77047711
Accession: 29434
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPPYP00000024290	zf-CCCH	PF00642.24	0.00014	1	1
ENSPPYP00000000565	zf-CCCH	PF00642.24	0.00015	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPPYT00000000589	RC3H1-202	3285	-	ENSPPYP00000000565	1094 (aa)	-	H2N4M7
ENSPPYT00000033552	RC3H1-201	3360	-	ENSPPYP00000024290	1055 (aa)	-	K7EUR3

Gene Model

Click here to download ENSPPYG00000000490's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPPYG00000000490's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPPYG00000000490	RC3H1	98	99.421	ENSG00000135870	RC3H1	100	96.028	Homo_sapiens
ENSPPYG00000000490	RC3H1	98	96.077	ENSAMEG00000015657	RC3H1	100	93.557	Ailuropoda_melanoleuca
ENSPPYG00000000490	RC3H1	98	88.019	ENSAPLG00000005341	RC3H1	100	85.615	Anas_platyrhynchos
ENSPPYG00000000490	RC3H1	98	86.308	ENSACAG00000015271	RC3H1	100	83.552	Anolis_carolinensis
ENSPPYG00000000490	RC3H1	98	97.990	ENSANAG00000036716	RC3H1	100	95.499	Aotus_nancymaae
ENSPPYG00000000490	RC3H1	98	96.622	ENSBTAG00000052708	RC3H1	100	92.498	Bos_taurus
ENSPPYG00000000490	RC3H1	98	97.703	ENSCJAG00000009106	RC3H1	100	95.234	Callithrix_jacchus
ENSPPYG00000000490	RC3H1	98	96.364	ENSCAFG00000014434	RC3H1	100	93.733	Canis_familiaris
ENSPPYG00000000490	RC3H1	98	96.364	ENSCAFG00020017112	RC3H1	99	98.202	Canis_lupus_dingo
ENSPPYG00000000490	RC3H1	98	96.911	ENSCHIG00000002873	RC3H1	100	94.558	Capra_hircus
ENSPPYG00000000490	RC3H1	98	95.220	ENSTSYG00000003913	RC3H1	99	92.674	Carlito_syrichta
ENSPPYG00000000490	RC3H1	98	91.205	ENSCPOG00000004349	RC3H1	100	88.713	Cavia_porcellus
ENSPPYG00000000490	RC3H1	100	97.180	ENSCCAG00000025652	RC3H1	100	97.180	Cebus_capucinus
ENSPPYG00000000490	RC3H1	98	98.565	ENSCATG00000033497	RC3H1	100	95.940	Cercocebus_atys
ENSPPYG00000000490	RC3H1	98	94.551	ENSCLAG00000011267	RC3H1	100	91.799	Chinchilla_lanigera
ENSPPYG00000000490	RC3H1	98	98.373	ENSCSAG00000011823	RC3H1	83	97.214	Chlorocebus_sabaeus
ENSPPYG00000000490	RC3H1	93	96.304	ENSCPBG00000014670	RC3H1	100	96.304	Chrysemys_picta_bellii
ENSPPYG00000000490	RC3H1	98	98.469	ENSCANG00000032120	RC3H1	100	95.855	Colobus_angolensis_palliatus
ENSPPYG00000000490	RC3H1	98	93.589	ENSCGRG00001020812	Rc3h1	100	90.997	Cricetulus_griseus_chok1gshd
ENSPPYG00000000490	RC3H1	98	93.589	ENSCGRG00000011952	Rc3h1	100	90.997	Cricetulus_griseus_crigri
ENSPPYG00000000490	RC3H1	59	95.645	ENSDNOG00000011494	RC3H1	99	95.645	Dasypus_novemcinctus
ENSPPYG00000000490	RC3H1	98	95.024	ENSDORG00000004855	Rc3h1	100	92.763	Dipodomys_ordii
ENSPPYG00000000490	RC3H1	81	96.647	ENSETEG00000012064	RC3H1	84	96.647	Echinops_telfairi
ENSPPYG00000000490	RC3H1	98	96.718	ENSEASG00005017000	RC3H1	100	92.498	Equus_asinus_asinus
ENSPPYG00000000490	RC3H1	98	96.622	ENSECAG00000021208	RC3H1	100	92.321	Equus_caballus
ENSPPYG00000000490	RC3H1	92	83.302	ENSEEUG00000014861	RC3H1	92	83.302	Erinaceus_europaeus
ENSPPYG00000000490	RC3H1	98	96.459	ENSFCAG00000014924	RC3H1	100	94.086	Felis_catus
ENSPPYG00000000490	RC3H1	98	87.335	ENSFALG00000002947	RC3H1	100	84.716	Ficedula_albicollis
ENSPPYG00000000490	RC3H1	98	94.551	ENSFDAG00000013303	RC3H1	100	91.799	Fukomys_damarensis
ENSPPYG00000000490	RC3H1	98	88.612	ENSGALG00000004587	RC3H1	100	84.750	Gallus_gallus
ENSPPYG00000000490	RC3H1	98	89.272	ENSGAGG00000018194	RC3H1	100	85.662	Gopherus_agassizii
ENSPPYG00000000490	RC3H1	100	93.042	ENSGGOG00000005735	RC3H1	100	93.042	Gorilla_gorilla
ENSPPYG00000000490	RC3H1	88	88.498	ENSHGLG00000004183	-	100	88.498	Heterocephalus_glaber_female
ENSPPYG00000000490	RC3H1	98	94.073	ENSHGLG00100008577	RC3H1	100	91.093	Heterocephalus_glaber_male
ENSPPYG00000000490	RC3H1	98	95.698	ENSSTOG00000016033	RC3H1	100	93.298	Ictidomys_tridecemlineatus
ENSPPYG00000000490	RC3H1	98	95.033	ENSJJAG00000018915	Rc3h1	100	92.498	Jaculus_jaculus
ENSPPYG00000000490	RC3H1	98	76.576	ENSLACG00000016186	RC3H1	100	78.804	Latimeria_chalumnae
ENSPPYG00000000490	RC3H1	98	96.651	ENSLAFG00000004367	RC3H1	100	94.080	Loxodonta_africana
ENSPPYG00000000490	RC3H1	100	98.026	ENSMFAG00000033725	RC3H1	100	95.852	Macaca_fascicularis
ENSPPYG00000000490	RC3H1	98	99.228	ENSMMUG00000000630	RC3H1	100	95.763	Macaca_mulatta
ENSPPYG00000000490	RC3H1	98	98.565	ENSMNEG00000035968	RC3H1	100	95.940	Macaca_nemestrina
ENSPPYG00000000490	RC3H1	98	98.469	ENSMLEG00000037455	RC3H1	100	95.852	Mandrillus_leucophaeus
ENSPPYG00000000490	RC3H1	100	89.854	ENSMAUG00000020864	Rc3h1	100	89.854	Mesocricetus_auratus
ENSPPYG00000000490	RC3H1	98	96.746	ENSMICG00000003000	RC3H1	100	94.175	Microcebus_murinus
ENSPPYG00000000490	RC3H1	91	92.562	ENSMOCG00000016587	Rc3h1	98	89.773	Microtus_ochrogaster
ENSPPYG00000000490	RC3H1	98	92.161	ENSMODG00000004289	RC3H1	100	89.594	Monodelphis_domestica
ENSPPYG00000000490	RC3H1	98	93.206	MGP_CAROLIEiJ_G0014756	Rc3h1	100	90.644	Mus_caroli
ENSPPYG00000000490	RC3H1	98	93.919	ENSMUSG00000040423	Rc3h1	100	90.556	Mus_musculus
ENSPPYG00000000490	RC3H1	98	93.110	MGP_PahariEiJ_G0027992	Rc3h1	100	90.380	Mus_pahari
ENSPPYG00000000490	RC3H1	98	93.919	MGP_SPRETEiJ_G0015563	Rc3h1	100	90.468	Mus_spretus
ENSPPYG00000000490	RC3H1	98	95.698	ENSMPUG00000004747	RC3H1	100	93.210	Mustela_putorius_furo
ENSPPYG00000000490	RC3H1	98	94.545	ENSMLUG00000011127	RC3H1	100	92.321	Myotis_lucifugus
ENSPPYG00000000490	RC3H1	98	94.928	ENSNGAG00000011135	Rc3h1	100	92.586	Nannospalax_galili
ENSPPYG00000000490	RC3H1	98	98.469	ENSNLEG00000015327	RC3H1	100	95.940	Nomascus_leucogenys
ENSPPYG00000000490	RC3H1	96	83.855	ENSOPRG00000013068	RC3H1	99	80.371	Ochotona_princeps
ENSPPYG00000000490	RC3H1	98	93.876	ENSODEG00000014185	RC3H1	100	91.358	Octodon_degus
ENSPPYG00000000490	RC3H1	98	91.098	ENSOANG00000000924	RC3H1	100	88.472	Ornithorhynchus_anatinus
ENSPPYG00000000490	RC3H1	98	95.598	ENSOCUG00000004930	RC3H1	98	92.838	Oryctolagus_cuniculus
ENSPPYG00000000490	RC3H1	100	86.960	ENSOGAG00000004044	RC3H1	100	86.960	Otolemur_garnettii
ENSPPYG00000000490	RC3H1	98	95.806	ENSOARG00000013011	RC3H1	100	93.070	Ovis_aries
ENSPPYG00000000490	RC3H1	98	98.660	ENSPPAG00000039253	RC3H1	100	96.032	Pan_paniscus
ENSPPYG00000000490	RC3H1	98	97.297	ENSPPRG00000009007	RC3H1	100	93.292	Panthera_pardus
ENSPPYG00000000490	RC3H1	98	96.000	ENSPTIG00000015326	RC3H1	100	93.673	Panthera_tigris_altaica
ENSPPYG00000000490	RC3H1	98	98.660	ENSPTRG00000001702	RC3H1	100	96.032	Pan_troglodytes
ENSPPYG00000000490	RC3H1	98	98.469	ENSPANG00000008886	RC3H1	100	95.852	Papio_anubis
ENSPPYG00000000490	RC3H1	98	89.962	ENSPSIG00000016181	RC3H1	100	86.328	Pelodiscus_sinensis
ENSPPYG00000000490	RC3H1	98	93.123	ENSPEMG00000011966	Rc3h1	100	90.644	Peromyscus_maniculatus_bairdii
ENSPPYG00000000490	RC3H1	75	94.304	ENSPCIG00000002058	RC3H1	95	98.430	Phascolarctos_cinereus
ENSPPYG00000000490	RC3H1	80	100.000	ENSPCAG00000010775	RC3H1	87	100.000	Procavia_capensis
ENSPPYG00000000490	RC3H1	80	95.991	ENSPCOG00000021795	RC3H1	96	92.842	Propithecus_coquereli
ENSPPYG00000000490	RC3H1	98	87.081	ENSPVAG00000007593	RC3H1	100	84.819	Pteropus_vampyrus
ENSPPYG00000000490	RC3H1	98	64.165	ENSPNAG00000023439	rc3h1a	96	90.787	Pygocentrus_nattereri
ENSPPYG00000000490	RC3H1	98	98.565	ENSRBIG00000037743	RC3H1	100	95.855	Rhinopithecus_bieti
ENSPPYG00000000490	RC3H1	98	98.373	ENSRROG00000036546	RC3H1	100	95.763	Rhinopithecus_roxellana
ENSPPYG00000000490	RC3H1	93	93.805	ENSSBOG00000010664	RC3H1	100	93.805	Saimiri_boliviensis_boliviensis
ENSPPYG00000000490	RC3H1	98	91.205	ENSSHAG00000007589	RC3H1	100	88.546	Sarcophilus_harrisii
ENSPPYG00000000490	RC3H1	86	86.712	ENSSARG00000004660	RC3H1	86	86.712	Sorex_araneus
ENSPPYG00000000490	RC3H1	98	84.186	ENSSPUG00000018472	RC3H1	100	82.121	Sphenodon_punctatus
ENSPPYG00000000490	RC3H1	98	97.297	ENSSSCG00000015498	RC3H1	100	94.086	Sus_scrofa
ENSPPYG00000000490	RC3H1	98	87.761	ENSTGUG00000004090	RC3H1	100	85.263	Taeniopygia_guttata
ENSPPYG00000000490	RC3H1	93	90.909	ENSTBEG00000005015	RC3H1	93	90.909	Tupaia_belangeri
ENSPPYG00000000490	RC3H1	98	96.180	ENSTTRG00000008572	RC3H1	100	93.216	Tursiops_truncatus
ENSPPYG00000000490	RC3H1	98	95.502	ENSUAMG00000019525	RC3H1	100	92.939	Ursus_americanus
ENSPPYG00000000490	RC3H1	98	96.172	ENSUMAG00000020087	RC3H1	100	93.474	Ursus_maritimus
ENSPPYG00000000490	RC3H1	91	98.649	ENSVPAG00000002591	RC3H1	92	98.649	Vicugna_pacos
ENSPPYG00000000490	RC3H1	98	96.092	ENSVVUG00000014201	RC3H1	100	93.404	Vulpes_vulpes
ENSPPYG00000000490	RC3H1	98	80.603	ENSXETG00000020030	rc3h1	100	77.332	Xenopus_tropicalis