EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPPYG00000000790 (Gene tree)
Gene ID: 100434456
Gene Symbol: -
Alias: -
Full Name: RAB13%2C member RAS oncogene family
Gene Type: protein_coding
Species: Pongo_abelii
Status: putative
Strand: Plus strand
Length: 5159 bases
Position: chr1:97523462-97528620
Accession: 100434456
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPPYP00000000925	MMR_HSR1	PF01926.23	9.9e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPPYT00000000957	-	1679	-	ENSPPYP00000000925	203 (aa)	XP_002810164	H2N5M4

Gene Model

Click here to download ENSPPYG00000000790's gene model file

Pathways

Pathway ID	Pathway Name	Source
pon04530	Tight junction	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPPYG00000000790's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPPYG00000000790	-	58	31.405	ENSPPYG00000014260	ARL14	60	31.405
ENSPPYG00000000790	-	95	39.109	ENSPPYG00000015072	RAB33B	88	39.109
ENSPPYG00000000790	-	95	39.062	ENSPPYG00000014074	RAB5A	89	39.062
ENSPPYG00000000790	-	97	51.269	ENSPPYG00000012360	RAB1A	96	51.269
ENSPPYG00000000790	-	78	42.405	ENSPPYG00000014116	RAB6B	76	42.405
ENSPPYG00000000790	-	91	42.424	ENSPPYG00000009504	RAB11B	91	42.424
ENSPPYG00000000790	-	84	55.294	ENSPPYG00000005021	RAB35	84	55.294
ENSPPYG00000000790	-	80	40.476	ENSPPYG00000020591	RAB9B	83	40.476
ENSPPYG00000000790	-	95	37.500	ENSPPYG00000008398	RAB5C	89	37.500
ENSPPYG00000000790	-	83	30.682	ENSPPYG00000012594	DNAJC27	64	30.682
ENSPPYG00000000790	-	87	42.781	ENSPPYG00000020713	RAB33A	79	42.781
ENSPPYG00000000790	-	91	36.702	ENSPPYG00000011171	RAB22A	97	36.702
ENSPPYG00000000790	-	86	44.318	ENSPPYG00000002172	RAB18	85	44.318
ENSPPYG00000000790	-	62	31.429	ENSPPYG00000011245	ARFRP1	67	31.429
ENSPPYG00000000790	-	81	38.182	ENSPPYG00000016739	RAB23	69	38.182
ENSPPYG00000000790	-	67	47.794	ENSPPYG00000008601	-	72	47.794
ENSPPYG00000000790	-	79	40.123	ENSPPYG00000004369	KRAS	98	37.436
ENSPPYG00000000790	-	86	46.629	ENSPPYG00000020901	RAB39B	84	46.629
ENSPPYG00000000790	-	78	43.038	ENSPPYG00000003663	RAB6A	76	43.038
ENSPPYG00000000790	-	83	47.024	ENSPPYG00000005597	RAB2B	78	47.024
ENSPPYG00000000790	-	67	38.194	ENSPPYG00000016550	-	94	38.194
ENSPPYG00000000790	-	83	47.929	ENSPPYG00000018617	RAB2A	80	47.929
ENSPPYG00000000790	-	80	49.383	ENSPPYG00000003733	RAB30	80	49.383
ENSPPYG00000000790	-	84	51.744	ENSPPYG00000009015	-	51	51.744
ENSPPYG00000000790	-	79	39.506	ENSPPYG00000002868	HRAS	85	39.506
ENSPPYG00000000790	-	95	36.275	ENSPPYG00000008107	-	79	36.275
ENSPPYG00000000790	-	85	42.197	ENSPPYG00000000730	RAB25	81	42.197
ENSPPYG00000000790	-	83	35.632	ENSPPYG00000004331	RERG	84	35.632
ENSPPYG00000000790	-	80	38.323	ENSPPYG00000013431	RAB7A	81	38.323
ENSPPYG00000000790	-	81	47.273	ENSPPYG00000006573	RAB11A	76	47.273
ENSPPYG00000000790	-	79	37.423	ENSPPYG00000014142	MRAS	78	37.423
ENSPPYG00000000790	-	79	38.272	ENSPPYG00000000997	NRAS	85	38.272

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPPYG00000000790	-	100	100.000	ENSG00000143545	RAB13	100	100.000	Homo_sapiens
ENSPPYG00000000790	-	99	75.124	ENSACIG00000008584	rab13	97	75.124	Amphilophus_citrinellus
ENSPPYG00000000790	-	100	98.522	ENSANAG00000030247	-	100	98.522	Aotus_nancymaae
ENSPPYG00000000790	-	99	78.713	ENSAMXG00000030712	rab13	99	78.713	Astyanax_mexicanus
ENSPPYG00000000790	-	100	98.030	ENSBTAG00000017604	RAB13	100	98.030	Bos_taurus
ENSPPYG00000000790	-	80	47.239	WBGene00019317	K02E10.1	75	47.239	Caenorhabditis_elegans
ENSPPYG00000000790	-	100	98.030	ENSCJAG00000009933	-	100	98.030	Callithrix_jacchus
ENSPPYG00000000790	-	100	97.537	ENSCHIG00000022271	-	100	97.537	Capra_hircus
ENSPPYG00000000790	-	99	91.089	ENSCPOG00000011491	-	99	91.089	Cavia_porcellus
ENSPPYG00000000790	-	100	99.507	ENSCCAG00000028502	-	100	99.507	Cebus_capucinus
ENSPPYG00000000790	-	100	100.000	ENSCATG00000041779	-	100	100.000	Cercocebus_atys
ENSPPYG00000000790	-	100	91.133	ENSCLAG00000006603	-	100	91.133	Chinchilla_lanigera
ENSPPYG00000000790	-	100	100.000	ENSCANG00000036573	-	100	100.000	Colobus_angolensis_palliatus
ENSPPYG00000000790	-	100	95.567	ENSCGRG00001021505	Rab13	100	95.567	Cricetulus_griseus_chok1gshd
ENSPPYG00000000790	-	100	95.567	ENSCGRG00000012126	Rab13	100	95.567	Cricetulus_griseus_crigri
ENSPPYG00000000790	-	99	75.980	ENSCSEG00000002358	rab13	99	75.980	Cynoglossus_semilaevis
ENSPPYG00000000790	-	99	78.218	ENSDARG00000034771	rab13	99	78.218	Danio_rerio
ENSPPYG00000000790	-	100	94.581	ENSDORG00000001591	Rab13	100	94.581	Dipodomys_ordii
ENSPPYG00000000790	-	100	98.522	ENSEASG00005000683	-	100	98.522	Equus_asinus_asinus
ENSPPYG00000000790	-	100	98.522	ENSECAG00000016551	RAB13	100	98.522	Equus_caballus
ENSPPYG00000000790	-	99	90.099	ENSEEUG00000001233	-	99	90.099	Erinaceus_europaeus
ENSPPYG00000000790	-	99	76.733	ENSELUG00000012801	rab13	99	76.733	Esox_lucius
ENSPPYG00000000790	-	100	92.118	ENSFCAG00000045269	-	100	92.118	Felis_catus
ENSPPYG00000000790	-	65	96.970	ENSFDAG00000014469	-	100	96.970	Fukomys_damarensis
ENSPPYG00000000790	-	99	75.743	ENSFHEG00000021221	rab13	95	85.549	Fundulus_heteroclitus
ENSPPYG00000000790	-	99	75.248	ENSGACG00000011925	rab13	99	75.248	Gasterosteus_aculeatus
ENSPPYG00000000790	-	85	90.751	ENSGAGG00000000742	-	99	81.281	Gopherus_agassizii
ENSPPYG00000000790	-	100	100.000	ENSGGOG00000023693	RAB13	100	100.000	Gorilla_gorilla
ENSPPYG00000000790	-	100	90.148	ENSHGLG00000008749	RAB13	100	90.148	Heterocephalus_glaber_female
ENSPPYG00000000790	-	100	90.148	ENSHGLG00100013608	RAB13	100	90.148	Heterocephalus_glaber_male
ENSPPYG00000000790	-	99	73.762	ENSHCOG00000007440	rab13	95	86.127	Hippocampus_comes
ENSPPYG00000000790	-	99	77.000	ENSIPUG00000003199	rab13	99	77.000	Ictalurus_punctatus
ENSPPYG00000000790	-	100	97.044	ENSSTOG00000011222	-	100	97.044	Ictidomys_tridecemlineatus
ENSPPYG00000000790	-	100	92.118	ENSJJAG00000010575	Rab13	100	92.118	Jaculus_jaculus
ENSPPYG00000000790	-	99	75.500	ENSKMAG00000001908	rab13	99	75.500	Kryptolebias_marmoratus
ENSPPYG00000000790	-	99	77.000	ENSLBEG00000026779	rab13	99	77.000	Labrus_bergylta
ENSPPYG00000000790	-	85	77.907	ENSLACG00000008103	-	97	77.907	Latimeria_chalumnae
ENSPPYG00000000790	-	100	100.000	ENSMFAG00000041018	RAB13	100	100.000	Macaca_fascicularis
ENSPPYG00000000790	-	100	100.000	ENSMNEG00000028951	-	100	100.000	Macaca_nemestrina
ENSPPYG00000000790	-	100	100.000	ENSMLEG00000042247	-	100	100.000	Mandrillus_leucophaeus
ENSPPYG00000000790	-	99	75.248	ENSMAMG00000014602	rab13	99	75.248	Mastacembelus_armatus
ENSPPYG00000000790	-	100	94.581	ENSMAUG00000015713	Rab13	100	94.581	Mesocricetus_auratus
ENSPPYG00000000790	-	100	97.044	ENSMICG00000010340	-	100	97.044	Microcebus_murinus
ENSPPYG00000000790	-	100	95.567	ENSMOCG00000021448	Rab13	100	95.567	Microtus_ochrogaster
ENSPPYG00000000790	-	99	92.574	ENSMODG00000017295	-	84	92.574	Monodelphis_domestica
ENSPPYG00000000790	-	100	92.611	MGP_CAROLIEiJ_G0025227	Rab13	100	92.611	Mus_caroli
ENSPPYG00000000790	-	100	91.626	ENSMUSG00000027935	Rab13	100	91.626	Mus_musculus
ENSPPYG00000000790	-	99	92.079	MGP_PahariEiJ_G0026671	Rab13	99	92.079	Mus_pahari
ENSPPYG00000000790	-	100	95.567	ENSNGAG00000010309	Rab13	100	95.567	Nannospalax_galili
ENSPPYG00000000790	-	99	75.248	ENSNBRG00000004124	rab13	99	75.248	Neolamprologus_brichardi
ENSPPYG00000000790	-	100	100.000	ENSNLEG00000028944	-	100	100.000	Nomascus_leucogenys
ENSPPYG00000000790	-	100	92.157	ENSMEUG00000009667	-	100	92.157	Notamacropus_eugenii
ENSPPYG00000000790	-	100	89.655	ENSODEG00000010443	-	100	89.655	Octodon_degus
ENSPPYG00000000790	-	63	97.638	ENSODEG00000012634	-	100	97.638	Octodon_degus
ENSPPYG00000000790	-	99	75.743	ENSONIG00000006340	rab13	99	75.743	Oreochromis_niloticus
ENSPPYG00000000790	-	88	96.067	ENSOCUG00000006286	-	100	96.067	Oryctolagus_cuniculus
ENSPPYG00000000790	-	99	76.238	ENSOMEG00000008210	rab13	99	76.238	Oryzias_melastigma
ENSPPYG00000000790	-	99	94.059	ENSOGAG00000016969	-	99	94.059	Otolemur_garnettii
ENSPPYG00000000790	-	100	100.000	ENSPPAG00000028435	-	100	100.000	Pan_paniscus
ENSPPYG00000000790	-	100	92.118	ENSPPRG00000008865	-	100	92.118	Panthera_pardus
ENSPPYG00000000790	-	100	100.000	ENSPTRG00000001370	RAB13	100	100.000	Pan_troglodytes
ENSPPYG00000000790	-	100	100.000	ENSPANG00000004479	-	100	100.000	Papio_anubis
ENSPPYG00000000790	-	99	75.743	ENSPMGG00000007680	rab13	99	75.743	Periophthalmus_magnuspinnatus
ENSPPYG00000000790	-	53	97.222	ENSPEMG00000017353	-	100	97.222	Peromyscus_maniculatus_bairdii
ENSPPYG00000000790	-	100	92.647	ENSPCIG00000029350	-	100	92.647	Phascolarctos_cinereus
ENSPPYG00000000790	-	95	74.112	ENSPLAG00000005832	RAB13	93	83.815	Poecilia_latipinna
ENSPPYG00000000790	-	90	80.328	ENSPREG00000017567	rab13	99	74.257	Poecilia_reticulata
ENSPPYG00000000790	-	100	98.030	ENSPCOG00000012189	-	100	98.030	Propithecus_coquereli
ENSPPYG00000000790	-	100	95.074	ENSPVAG00000011095	-	100	95.074	Pteropus_vampyrus
ENSPPYG00000000790	-	85	86.127	ENSPNAG00000004189	rab13	92	86.127	Pygocentrus_nattereri
ENSPPYG00000000790	-	100	92.611	ENSRNOG00000016733	Rab13	100	92.611	Rattus_norvegicus
ENSPPYG00000000790	-	100	99.507	ENSRBIG00000008552	-	100	99.507	Rhinopithecus_bieti
ENSPPYG00000000790	-	100	99.507	ENSRROG00000036885	-	100	99.507	Rhinopithecus_roxellana
ENSPPYG00000000790	-	100	99.015	ENSSBOG00000020342	-	100	99.015	Saimiri_boliviensis_boliviensis
ENSPPYG00000000790	-	100	91.667	ENSSHAG00000011866	-	100	91.667	Sarcophilus_harrisii
ENSPPYG00000000790	-	100	98.522	ENSSSCG00000006564	-	100	98.522	Sus_scrofa
ENSPPYG00000000790	-	99	76.733	ENSTRUG00000024177	rab13	99	76.733	Takifugu_rubripes
ENSPPYG00000000790	-	100	97.044	ENSTBEG00000012734	-	100	97.044	Tupaia_belangeri
ENSPPYG00000000790	-	100	99.507	ENSTTRG00000011183	-	100	99.507	Tursiops_truncatus
ENSPPYG00000000790	-	71	81.944	ENSXETG00000020729	rab13	99	78.882	Xenopus_tropicalis
ENSPPYG00000000790	-	85	82.659	ENSXCOG00000019533	rab13	93	82.659	Xiphophorus_couchianus