EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Orthologs
Description
Ensembl ID
ENSPPYG00000000996 (Gene tree)
Gene ID
100173684
Gene Symbol
CSDE1
Alias
D1S155E|UNR
Full Name
cold shock domain containing E1
Gene Type
protein_coding
Species
Pongo_abelii
Status
putative
Strand
Plus strand
Length
41596 bases
Position
chr1:113450599-113492194
Accession
29905
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSPPYP00000001161CSDPF00313.226.7e-8515
ENSPPYP00000001161CSDPF00313.226.7e-8525
ENSPPYP00000001161CSDPF00313.226.7e-8535
ENSPPYP00000001161CSDPF00313.226.7e-8545
ENSPPYP00000001161CSDPF00313.226.7e-8555
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSPPYT00000001200CSDE1-2014236-ENSPPYP00000001161798 (aa)-A0A2J8ULR8
Gene Model
Click here to download ENSPPYG00000000996's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSPPYG00000000996's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSPPYG00000000996CSDE110099.875ENSG00000009307CSDE1100100.000Homo_sapiens
ENSPPYG00000000996CSDE110075.366ENSAPOG00000015538csde110075.000Acanthochromis_polyacanthus
ENSPPYG00000000996CSDE110094.236ENSAMEG00000017129CSDE19494.236Ailuropoda_melanoleuca
ENSPPYG00000000996CSDE19176.757ENSACIG00000015175csde110076.757Amphilophus_citrinellus
ENSPPYG00000000996CSDE110075.488ENSAOCG00000011510csde110074.657Amphiprion_ocellaris
ENSPPYG00000000996CSDE110077.278ENSAPEG00000007194csde110075.488Amphiprion_percula
ENSPPYG00000000996CSDE110074.282ENSATEG00000003864csde110074.282Anabas_testudineus
ENSPPYG00000000996CSDE110088.221ENSAPLG00000008797CSDE110088.221Anas_platyrhynchos
ENSPPYG00000000996CSDE110092.105ENSACAG00000003120CSDE110092.105Anolis_carolinensis
ENSPPYG00000000996CSDE17874.150ENSANAG00000028396-9174.150Aotus_nancymaae
ENSPPYG00000000996CSDE110099.499ENSANAG00000024665CSDE19599.499Aotus_nancymaae
ENSPPYG00000000996CSDE110076.875ENSACLG00000013296csde110076.875Astatotilapia_calliptera
ENSPPYG00000000996CSDE110074.065ENSAMXG00000007436csde110074.065Astyanax_mexicanus
ENSPPYG00000000996CSDE110098.747ENSBTAG00000000678CSDE110094.862Bos_taurus
ENSPPYG00000000996CSDE110099.624ENSCJAG00000012565CSDE19599.624Callithrix_jacchus
ENSPPYG00000000996CSDE19895.275ENSCAFG00000009618CSDE19495.275Canis_familiaris
ENSPPYG00000000996CSDE110095.363ENSCAFG00020000481CSDE110095.363Canis_lupus_dingo
ENSPPYG00000000996CSDE110098.747ENSCHIG00000017250CSDE110094.862Capra_hircus
ENSPPYG00000000996CSDE110098.496ENSTSYG00000003747CSDE110098.496Carlito_syrichta
ENSPPYG00000000996CSDE110091.228ENSCAPG00000015128CSDE110091.228Cavia_aperea
ENSPPYG00000000996CSDE110093.609ENSCPOG00000040388CSDE110093.609Cavia_porcellus
ENSPPYG00000000996CSDE19577.228ENSCCAG00000033677-9976.485Cebus_capucinus
ENSPPYG00000000996CSDE19774.610ENSCCAG00000030878-9174.610Cebus_capucinus
ENSPPYG00000000996CSDE110099.624ENSCCAG00000036794CSDE110099.624Cebus_capucinus
ENSPPYG00000000996CSDE110099.875ENSCATG00000036962CSDE198100.000Cercocebus_atys
ENSPPYG00000000996CSDE110098.622ENSCLAG00000006618CSDE110098.622Chinchilla_lanigera
ENSPPYG00000000996CSDE110099.875ENSCSAG00000001658CSDE19599.875Chlorocebus_sabaeus
ENSPPYG00000000996CSDE110099.080ENSCHOG00000000918CSDE18599.080Choloepus_hoffmanni
ENSPPYG00000000996CSDE110092.481ENSCPBG00000016547CSDE110092.481Chrysemys_picta_bellii
ENSPPYG00000000996CSDE19743.154ENSCING00000014465-9643.154Ciona_intestinalis
ENSPPYG00000000996CSDE19642.627ENSCSAVG00000008100-9842.627Ciona_savignyi
ENSPPYG00000000996CSDE19993.923ENSCANG00000031069-9993.923Colobus_angolensis_palliatus
ENSPPYG00000000996CSDE110099.875ENSCANG00000035096CSDE198100.000Colobus_angolensis_palliatus
ENSPPYG00000000996CSDE110098.496ENSCGRG00001016833-10098.496Cricetulus_griseus_chok1gshd
ENSPPYG00000000996CSDE110078.321ENSCGRG00001014011-10078.321Cricetulus_griseus_chok1gshd
ENSPPYG00000000996CSDE110075.096ENSCGRG00000005831-10075.096Cricetulus_griseus_crigri
ENSPPYG00000000996CSDE19798.441ENSCGRG00000002225-10098.441Cricetulus_griseus_crigri
ENSPPYG00000000996CSDE110074.605ENSCSEG00000002620csde110074.125Cynoglossus_semilaevis
ENSPPYG00000000996CSDE110076.500ENSCVAG00000001344csde110076.149Cyprinodon_variegatus
ENSPPYG00000000996CSDE110077.903ENSDARG00000074758csde110077.903Danio_rerio
ENSPPYG00000000996CSDE110094.618ENSDNOG00000010287-9394.618Dasypus_novemcinctus
ENSPPYG00000000996CSDE110097.995ENSDORG00000011609Csde110097.995Dipodomys_ordii
ENSPPYG00000000996CSDE19548.776FBgn0263352Unr8148.193Drosophila_melanogaster
ENSPPYG00000000996CSDE19974.153ENSETEG00000013678-9974.153Echinops_telfairi
ENSPPYG00000000996CSDE19398.347ENSETEG00000002491-7498.347Echinops_telfairi
ENSPPYG00000000996CSDE19083.107ENSETEG00000006280-10083.107Echinops_telfairi
ENSPPYG00000000996CSDE17668.543ENSETEG00000007109-9968.543Echinops_telfairi
ENSPPYG00000000996CSDE19956.143ENSEBUG00000008647csde19954.405Eptatretus_burgeri
ENSPPYG00000000996CSDE110099.248ENSEASG00005006284CSDE110099.248Equus_asinus_asinus
ENSPPYG00000000996CSDE110099.248ENSECAG00000020885CSDE110099.248Equus_caballus
ENSPPYG00000000996CSDE19299.476ENSEEUG00000006286CSDE16899.476Erinaceus_europaeus
ENSPPYG00000000996CSDE110073.913ENSELUG00000015507csde110072.761Esox_lucius
ENSPPYG00000000996CSDE110099.248ENSFCAG00000029266CSDE110095.363Felis_catus
ENSPPYG00000000996CSDE110091.855ENSFALG00000003407CSDE110091.855Ficedula_albicollis
ENSPPYG00000000996CSDE110098.872ENSFDAG00000007882CSDE110098.872Fukomys_damarensis
ENSPPYG00000000996CSDE110076.654ENSFHEG00000010799csde110076.654Fundulus_heteroclitus
ENSPPYG00000000996CSDE19976.721ENSGMOG00000012731csde110076.721Gadus_morhua
ENSPPYG00000000996CSDE19892.072ENSGALG00000002139CSDE19892.072Gallus_gallus
ENSPPYG00000000996CSDE19372.780ENSGAFG00000005241csde19572.780Gambusia_affinis
ENSPPYG00000000996CSDE19977.500ENSGACG00000004544csde110077.500Gasterosteus_aculeatus
ENSPPYG00000000996CSDE110092.105ENSGAGG00000017685CSDE110092.105Gopherus_agassizii
ENSPPYG00000000996CSDE110099.875ENSGGOG00000002164CSDE110095.990Gorilla_gorilla
ENSPPYG00000000996CSDE110076.244ENSHBUG00000020315csde110074.250Haplochromis_burtoni
ENSPPYG00000000996CSDE19689.978ENSHGLG00000010039-10089.978Heterocephalus_glaber_female
ENSPPYG00000000996CSDE19989.307ENSHGLG00000008555-9989.307Heterocephalus_glaber_female
ENSPPYG00000000996CSDE19983.081ENSHGLG00000007471-9883.081Heterocephalus_glaber_female
ENSPPYG00000000996CSDE19980.176ENSHGLG00000000650-9980.176Heterocephalus_glaber_female
ENSPPYG00000000996CSDE110089.474ENSHGLG00000009620-10089.724Heterocephalus_glaber_female
ENSPPYG00000000996CSDE110086.216ENSHGLG00000003829-10086.216Heterocephalus_glaber_female
ENSPPYG00000000996CSDE110082.456ENSHGLG00000019549-10082.456Heterocephalus_glaber_female
ENSPPYG00000000996CSDE110081.078ENSHGLG00100012072-10082.986Heterocephalus_glaber_male
ENSPPYG00000000996CSDE19480.615ENSHGLG00100004195-10080.615Heterocephalus_glaber_male
ENSPPYG00000000996CSDE19689.755ENSHGLG00100006910-10089.755Heterocephalus_glaber_male
ENSPPYG00000000996CSDE19782.183ENSHGLG00100004833-10082.183Heterocephalus_glaber_male
ENSPPYG00000000996CSDE110077.444ENSHGLG00100001846-10077.444Heterocephalus_glaber_male
ENSPPYG00000000996CSDE110099.123ENSHGLG00100019438-10099.123Heterocephalus_glaber_male
ENSPPYG00000000996CSDE19984.481ENSHGLG00100002245-9984.481Heterocephalus_glaber_male
ENSPPYG00000000996CSDE19980.556ENSHGLG00100007287-9880.556Heterocephalus_glaber_male
ENSPPYG00000000996CSDE110075.875ENSHCOG00000004158csde110073.250Hippocampus_comes
ENSPPYG00000000996CSDE110074.065ENSIPUG00000000355csde110074.065Ictalurus_punctatus
ENSPPYG00000000996CSDE18682.258ENSSTOG00000032722-9882.258Ictidomys_tridecemlineatus
ENSPPYG00000000996CSDE110079.901ENSSTOG00000030994-10079.901Ictidomys_tridecemlineatus
ENSPPYG00000000996CSDE110098.246ENSJJAG00000019571Csde110098.246Jaculus_jaculus
ENSPPYG00000000996CSDE110076.522ENSKMAG00000005685csde110076.143Kryptolebias_marmoratus
ENSPPYG00000000996CSDE110075.366ENSLBEG00000014770csde110074.532Labrus_bergylta
ENSPPYG00000000996CSDE110079.777ENSLACG00000018452CSDE19479.777Latimeria_chalumnae
ENSPPYG00000000996CSDE110079.975ENSLOCG00000010413csde19479.975Lepisosteus_oculatus
ENSPPYG00000000996CSDE110093.860ENSLAFG00000007150CSDE19693.860Loxodonta_africana
ENSPPYG00000000996CSDE110099.875ENSMFAG00000003674CSDE198100.000Macaca_fascicularis
ENSPPYG00000000996CSDE110099.875ENSMMUG00000001974CSDE110095.990Macaca_mulatta
ENSPPYG00000000996CSDE110099.875ENSMNEG00000045247CSDE198100.000Macaca_nemestrina
ENSPPYG00000000996CSDE110099.624ENSMLEG00000038673CSDE19599.624Mandrillus_leucophaeus
ENSPPYG00000000996CSDE110076.098ENSMAMG00000008821csde110075.156Mastacembelus_armatus
ENSPPYG00000000996CSDE110076.875ENSMZEG00005021675csde110074.250Maylandia_zebra
ENSPPYG00000000996CSDE19891.944ENSMGAG00000016381CSDE19891.944Meleagris_gallopavo
ENSPPYG00000000996CSDE110098.496ENSMAUG00000014031Csde110098.496Mesocricetus_auratus
ENSPPYG00000000996CSDE110098.371ENSMICG00000002050CSDE19998.884Microcebus_murinus
ENSPPYG00000000996CSDE110098.496ENSMOCG00000018960Csde110098.496Microtus_ochrogaster
ENSPPYG00000000996CSDE110074.532ENSMMOG00000015075csde110074.532Mola_mola
ENSPPYG00000000996CSDE110095.990ENSMODG00000004685CSDE110095.990Monodelphis_domestica
ENSPPYG00000000996CSDE110074.657ENSMALG00000007132csde110074.657Monopterus_albus
ENSPPYG00000000996CSDE110098.246MGP_CAROLIEiJ_G0025444Csde110098.246Mus_caroli
ENSPPYG00000000996CSDE110098.371ENSMUSG00000068823Csde110098.371Mus_musculus
ENSPPYG00000000996CSDE110098.622MGP_PahariEiJ_G0026888Csde110098.622Mus_pahari
ENSPPYG00000000996CSDE110098.622MGP_SPRETEiJ_G0026394Csde110098.622Mus_spretus
ENSPPYG00000000996CSDE19899.234ENSMPUG00000005753CSDE19999.234Mustela_putorius_furo
ENSPPYG00000000996CSDE110094.612ENSMLUG00000005681CSDE19494.612Myotis_lucifugus
ENSPPYG00000000996CSDE110098.622ENSNGAG00000021929Csde110098.622Nannospalax_galili
ENSPPYG00000000996CSDE19771.269ENSNGAG00000012599-10071.269Nannospalax_galili
ENSPPYG00000000996CSDE110074.250ENSNBRG00000020808csde110074.250Neolamprologus_brichardi
ENSPPYG00000000996CSDE110099.749ENSNLEG00000004842CSDE19599.749Nomascus_leucogenys
ENSPPYG00000000996CSDE19896.117ENSMEUG00000002677CSDE19696.117Notamacropus_eugenii
ENSPPYG00000000996CSDE19899.029ENSOPRG00000005002CSDE17699.029Ochotona_princeps
ENSPPYG00000000996CSDE19767.699ENSODEG00000005979-9867.699Octodon_degus
ENSPPYG00000000996CSDE110098.747ENSODEG00000007383-10098.747Octodon_degus
ENSPPYG00000000996CSDE110075.092ENSONIG00000009309csde110075.092Oreochromis_niloticus
ENSPPYG00000000996CSDE110079.551ENSOANG00000003346-10079.551Ornithorhynchus_anatinus
ENSPPYG00000000996CSDE110098.496ENSOCUG00000016438CSDE19598.496Oryctolagus_cuniculus
ENSPPYG00000000996CSDE110075.092ENSORLG00000000707csde110075.092Oryzias_latipes
ENSPPYG00000000996CSDE110076.875ENSORLG00020005148csde110075.092Oryzias_latipes_hni
ENSPPYG00000000996CSDE110076.875ENSORLG00015019415csde110075.092Oryzias_latipes_hsok
ENSPPYG00000000996CSDE110077.403ENSOMEG00000015656csde110075.610Oryzias_melastigma
ENSPPYG00000000996CSDE110095.363ENSOGAG00000012127CSDE19495.363Otolemur_garnettii
ENSPPYG00000000996CSDE110094.987ENSOARG00000020034CSDE19494.987Ovis_aries
ENSPPYG00000000996CSDE110099.875ENSPPAG00000025861CSDE110095.990Pan_paniscus
ENSPPYG00000000996CSDE110099.248ENSPPRG00000006747CSDE19599.248Panthera_pardus
ENSPPYG00000000996CSDE110099.248ENSPTIG00000015468CSDE110099.248Panthera_tigris_altaica
ENSPPYG00000000996CSDE110099.875ENSPTRG00000033721CSDE110099.875Pan_troglodytes
ENSPPYG00000000996CSDE110099.875ENSPANG00000018873CSDE110095.990Papio_anubis
ENSPPYG00000000996CSDE110074.000ENSPKIG00000009459csde110074.000Paramormyrops_kingsleyae
ENSPPYG00000000996CSDE19695.133ENSPSIG00000003823CSDE19695.133Pelodiscus_sinensis
ENSPPYG00000000996CSDE110074.157ENSPMGG00000000772csde110074.157Periophthalmus_magnuspinnatus
ENSPPYG00000000996CSDE110098.496ENSPEMG00000020357-10098.496Peromyscus_maniculatus_bairdii
ENSPPYG00000000996CSDE110096.115ENSPCIG00000022587CSDE110096.115Phascolarctos_cinereus
ENSPPYG00000000996CSDE19975.155ENSPFOG00000012664csde110075.621Poecilia_formosa
ENSPPYG00000000996CSDE19771.121ENSPLAG00000017680csde19371.121Poecilia_latipinna
ENSPPYG00000000996CSDE19871.017ENSPMEG00000005094csde19671.017Poecilia_mexicana
ENSPPYG00000000996CSDE110076.025ENSPREG00000011631csde110073.830Poecilia_reticulata
ENSPPYG00000000996CSDE110099.029ENSPCAG00000014368CSDE19099.029Procavia_capensis
ENSPPYG00000000996CSDE19083.582ENSPCOG00000008223-9083.582Propithecus_coquereli
ENSPPYG00000000996CSDE110098.997ENSPCOG00000017893CSDE110098.997Propithecus_coquereli
ENSPPYG00000000996CSDE110089.098ENSPVAG00000008225CSDE19589.098Pteropus_vampyrus
ENSPPYG00000000996CSDE110076.244ENSPNYG00000013745csde110074.250Pundamilia_nyererei
ENSPPYG00000000996CSDE110077.154ENSPNAG00000001958csde110074.532Pygocentrus_nattereri
ENSPPYG00000000996CSDE110098.496ENSRNOG00000061058Csde110098.496Rattus_norvegicus
ENSPPYG00000000996CSDE110093.992ENSRBIG00000038966-9493.992Rhinopithecus_bieti
ENSPPYG00000000996CSDE110095.990ENSRBIG00000038088-9998.387Rhinopithecus_bieti
ENSPPYG00000000996CSDE110099.875ENSRROG00000043101CSDE19899.763Rhinopithecus_roxellana
ENSPPYG00000000996CSDE110099.624ENSSBOG00000035592CSDE19599.624Saimiri_boliviensis_boliviensis
ENSPPYG00000000996CSDE110092.105ENSSHAG00000009831CSDE110092.105Sarcophilus_harrisii
ENSPPYG00000000996CSDE110076.119ENSSFOG00015007498csde110076.368Scleropages_formosus
ENSPPYG00000000996CSDE110075.732ENSSMAG00000007203csde110075.732Scophthalmus_maximus
ENSPPYG00000000996CSDE110075.366ENSSDUG00000015380csde110074.532Seriola_dumerili
ENSPPYG00000000996CSDE110077.154ENSSLDG00000008819csde110077.154Seriola_lalandi_dorsalis
ENSPPYG00000000996CSDE110093.985ENSSARG00000000738CSDE19493.985Sorex_araneus
ENSPPYG00000000996CSDE110091.855ENSSPUG00000008714CSDE110091.855Sphenodon_punctatus
ENSPPYG00000000996CSDE110077.154ENSSPAG00000000716csde110074.532Stegastes_partitus
ENSPPYG00000000996CSDE110099.248ENSSSCG00000006752CSDE110095.363Sus_scrofa
ENSPPYG00000000996CSDE110090.875ENSTGUG00000000972CSDE110090.875Taeniopygia_guttata
ENSPPYG00000000996CSDE110071.500ENSTRUG00000007996csde110071.500Takifugu_rubripes
ENSPPYG00000000996CSDE19380.989ENSTNIG00000010878csde110080.989Tetraodon_nigroviridis
ENSPPYG00000000996CSDE17798.718ENSTBEG00000011880-6298.718Tupaia_belangeri
ENSPPYG00000000996CSDE110094.612ENSTTRG00000015583CSDE19494.612Tursiops_truncatus
ENSPPYG00000000996CSDE18999.023ENSUAMG00000021779-9999.023Ursus_americanus
ENSPPYG00000000996CSDE19089.877ENSUAMG00000024289-9989.877Ursus_americanus
ENSPPYG00000000996CSDE110087.845ENSUMAG00000009720-9787.845Ursus_maritimus
ENSPPYG00000000996CSDE19799.525ENSUMAG00000011714-9999.525Ursus_maritimus
ENSPPYG00000000996CSDE110098.592ENSVPAG00000000749CSDE17998.592Vicugna_pacos
ENSPPYG00000000996CSDE19099.123ENSVVUG00000009890CSDE19499.123Vulpes_vulpes
ENSPPYG00000000996CSDE110085.893ENSXETG00000021448csde110085.893Xenopus_tropicalis
ENSPPYG00000000996CSDE19285.455ENSXCOG00000000035csde18585.455Xiphophorus_couchianus
ENSPPYG00000000996CSDE110077.250ENSXMAG00000009080csde110075.121Xiphophorus_maculatus

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