EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSPPYG00000001092 (Gene tree)
Gene ID: 100433336
Gene Symbol: PRPF38B
Alias: -
Full Name: pre-mRNA processing factor 38B
Gene Type: protein_coding
Species: Pongo_abelii
Status: putative
Strand: Minus strand
Length: 10392 bases
Position: chr1:119572017-119582408
Accession: 100433336
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPPYP00000001266	PRP38	PF03371.15	1.2e-57	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPPYT00000001308	PRPF38B-201	4512	-	ENSPPYP00000001266	546 (aa)	XP_002810560	H2N6K2

Gene Model

Click here to download ENSPPYG00000001092's gene model file

Pathways

Pathway ID	Pathway Name	Source
pon03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPPYG00000001092's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPPYG00000001092	PRPF38B	100	98.168	ENSCJAG00000002510	-	100	98.168	Callithrix_jacchus
ENSPPYG00000001092	PRPF38B	80	94.713	ENSTSYG00000029817	PRPF38B	97	94.537	Carlito_syrichta
ENSPPYG00000001092	PRPF38B	100	98.168	ENSCCAG00000033941	-	100	98.168	Cebus_capucinus
ENSPPYG00000001092	PRPF38B	100	99.084	ENSCSAG00000001531	PRPF38B	100	99.084	Chlorocebus_sabaeus
ENSPPYG00000001092	PRPF38B	100	99.267	ENSCANG00000027711	PRPF38B	100	99.267	Colobus_angolensis_palliatus
ENSPPYG00000001092	PRPF38B	100	97.985	ENSLAFG00000017112	PRPF38B	100	97.985	Loxodonta_africana
ENSPPYG00000001092	PRPF38B	100	99.267	ENSMMUG00000010155	PRPF38B	100	99.267	Macaca_mulatta
ENSPPYG00000001092	PRPF38B	100	99.084	ENSMNEG00000032003	-	100	99.084	Macaca_nemestrina
ENSPPYG00000001092	PRPF38B	100	97.985	ENSMICG00000032109	PRPF38B	100	97.985	Microcebus_murinus
ENSPPYG00000001092	PRPF38B	80	96.092	ENSODEG00000007646	PRPF38B	97	95.962	Octodon_degus
ENSPPYG00000001092	PRPF38B	83	97.797	ENSOCUG00000027424	PRPF38B	100	97.797	Oryctolagus_cuniculus
ENSPPYG00000001092	PRPF38B	100	98.168	ENSPCOG00000016051	PRPF38B	100	98.168	Propithecus_coquereli
ENSPPYG00000001092	PRPF38B	100	98.901	ENSRBIG00000043351	PRPF38B	100	98.901	Rhinopithecus_bieti
ENSPPYG00000001092	PRPF38B	100	98.901	ENSRROG00000029232	PRPF38B	100	98.901	Rhinopithecus_roxellana