EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPPYG00000001115 (Gene tree)
Gene ID: 100173273
Gene Symbol: RTCA
Alias: RTCD1
Full Name: Pongo abelii RNA 3'-terminal phosphate cyclase (RTCA)%2C mRNA.
Gene Type: protein_coding
Species: Pongo_abelii
Status: putative
Strand: Minus strand
Length: 25847 bases
Position: chr1:128201647-128227493
Accession: NM_001132824
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPPYP00000001293	RTC	PF01137.21	6.8e-87	1	1
ENSPPYP00000001293	RTC_insert	PF05189.13	9.8e-25	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPPYT00000001337	-	1485	XM_009247228	ENSPPYP00000001293	366 (aa)	XP_009245503	H2N6M8

Gene Model

Click here to download ENSPPYG00000001115's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPPYG00000001115's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPPYG00000001115	RTCA	100	99.180	ENSG00000137996	RTCA	100	100.000	Homo_sapiens
ENSPPYG00000001115	RTCA	99	71.745	ENSAPOG00000001345	rtca	98	71.745	Acanthochromis_polyacanthus
ENSPPYG00000001115	RTCA	73	94.052	ENSAMEG00000008855	RTCA	100	94.052	Ailuropoda_melanoleuca
ENSPPYG00000001115	RTCA	99	72.299	ENSACIG00000019643	rtca	99	72.299	Amphilophus_citrinellus
ENSPPYG00000001115	RTCA	100	71.038	ENSAOCG00000014979	rtca	99	71.038	Amphiprion_ocellaris
ENSPPYG00000001115	RTCA	100	71.038	ENSAPEG00000006945	rtca	99	71.038	Amphiprion_percula
ENSPPYG00000001115	RTCA	96	71.795	ENSATEG00000006315	rtca	96	71.795	Anabas_testudineus
ENSPPYG00000001115	RTCA	96	79.944	ENSAPLG00000015430	RTCA	100	79.944	Anas_platyrhynchos
ENSPPYG00000001115	RTCA	100	97.268	ENSANAG00000025446	RTCA	100	97.268	Aotus_nancymaae
ENSPPYG00000001115	RTCA	100	70.492	ENSACLG00000020770	rtca	99	70.492	Astatotilapia_calliptera
ENSPPYG00000001115	RTCA	100	72.678	ENSAMXG00000043271	rtca	100	72.678	Astyanax_mexicanus
ENSPPYG00000001115	RTCA	100	95.628	ENSBTAG00000006321	RTCA	100	95.628	Bos_taurus
ENSPPYG00000001115	RTCA	100	97.814	ENSCJAG00000003398	RTCA	100	97.814	Callithrix_jacchus
ENSPPYG00000001115	RTCA	100	95.628	ENSCAFG00000020010	RTCA	68	95.628	Canis_familiaris
ENSPPYG00000001115	RTCA	100	95.628	ENSCAFG00020011528	RTCA	57	95.628	Canis_lupus_dingo
ENSPPYG00000001115	RTCA	100	95.355	ENSCHIG00000018937	RTCA	100	95.355	Capra_hircus
ENSPPYG00000001115	RTCA	100	92.896	ENSTSYG00000011305	RTCA	100	92.896	Carlito_syrichta
ENSPPYG00000001115	RTCA	100	97.541	ENSCCAG00000021844	RTCA	100	97.541	Cebus_capucinus
ENSPPYG00000001115	RTCA	100	95.251	ENSCATG00000019364	RTCA	100	98.382	Cercocebus_atys
ENSPPYG00000001115	RTCA	87	95.584	ENSCLAG00000006125	RTCA	100	95.584	Chinchilla_lanigera
ENSPPYG00000001115	RTCA	100	98.907	ENSCSAG00000001509	RTCA	100	98.907	Chlorocebus_sabaeus
ENSPPYG00000001115	RTCA	100	93.443	ENSCHOG00000005211	RTCA	100	93.443	Choloepus_hoffmanni
ENSPPYG00000001115	RTCA	100	83.333	ENSCPBG00000026658	RTCA	100	83.333	Chrysemys_picta_bellii
ENSPPYG00000001115	RTCA	98	55.956	ENSCING00000007875	-	98	55.956	Ciona_intestinalis
ENSPPYG00000001115	RTCA	98	53.611	ENSCSAVG00000007269	-	98	53.611	Ciona_savignyi
ENSPPYG00000001115	RTCA	100	98.634	ENSCANG00000040106	RTCA	100	98.634	Colobus_angolensis_palliatus
ENSPPYG00000001115	RTCA	73	90.706	ENSCGRG00001013163	Rtca	85	90.706	Cricetulus_griseus_chok1gshd
ENSPPYG00000001115	RTCA	99	69.041	ENSCSEG00000000530	rtca	98	69.041	Cynoglossus_semilaevis
ENSPPYG00000001115	RTCA	100	59.016	ENSCVAG00000021809	rtca	100	59.016	Cyprinodon_variegatus
ENSPPYG00000001115	RTCA	100	73.770	ENSDARG00000002215	rtca	100	73.770	Danio_rerio
ENSPPYG00000001115	RTCA	100	93.989	ENSDNOG00000000456	RTCA	100	93.989	Dasypus_novemcinctus
ENSPPYG00000001115	RTCA	100	92.350	ENSDORG00000005448	Rtca	100	92.350	Dipodomys_ordii
ENSPPYG00000001115	RTCA	98	38.547	FBgn0025630	Rtca	98	38.547	Drosophila_melanogaster
ENSPPYG00000001115	RTCA	95	53.672	ENSEBUG00000008556	rtca	97	53.672	Eptatretus_burgeri
ENSPPYG00000001115	RTCA	100	94.536	ENSEASG00005015926	RTCA	100	94.536	Equus_asinus_asinus
ENSPPYG00000001115	RTCA	100	94.536	ENSECAG00000019831	RTCA	100	94.536	Equus_caballus
ENSPPYG00000001115	RTCA	91	82.659	ENSEEUG00000001165	RTCA	100	82.659	Erinaceus_europaeus
ENSPPYG00000001115	RTCA	99	72.299	ENSELUG00000003741	rtca	99	72.299	Esox_lucius
ENSPPYG00000001115	RTCA	100	95.082	ENSFCAG00000024460	RTCA	100	95.082	Felis_catus
ENSPPYG00000001115	RTCA	91	83.784	ENSFALG00000002443	RTCA	90	83.784	Ficedula_albicollis
ENSPPYG00000001115	RTCA	100	95.628	ENSFDAG00000012070	-	100	95.628	Fukomys_damarensis
ENSPPYG00000001115	RTCA	98	75.138	ENSFDAG00000016084	-	100	75.138	Fukomys_damarensis
ENSPPYG00000001115	RTCA	68	62.249	ENSFHEG00000002868	rtca	90	71.154	Fundulus_heteroclitus
ENSPPYG00000001115	RTCA	100	69.126	ENSGMOG00000013264	rtca	100	69.126	Gadus_morhua
ENSPPYG00000001115	RTCA	100	82.787	ENSGALG00000005277	RTCA	100	82.787	Gallus_gallus
ENSPPYG00000001115	RTCA	100	71.585	ENSGAFG00000011853	rtca	99	71.585	Gambusia_affinis
ENSPPYG00000001115	RTCA	100	69.399	ENSGACG00000013497	rtca	100	69.399	Gasterosteus_aculeatus
ENSPPYG00000001115	RTCA	80	84.300	ENSGAGG00000023306	RTCA	100	84.300	Gopherus_agassizii
ENSPPYG00000001115	RTCA	100	98.361	ENSGGOG00000044018	-	100	98.361	Gorilla_gorilla
ENSPPYG00000001115	RTCA	100	99.180	ENSGGOG00000009546	-	100	99.180	Gorilla_gorilla
ENSPPYG00000001115	RTCA	100	70.219	ENSHBUG00000002114	rtca	99	70.219	Haplochromis_burtoni
ENSPPYG00000001115	RTCA	100	94.262	ENSHGLG00000002617	RTCA	100	94.262	Heterocephalus_glaber_female
ENSPPYG00000001115	RTCA	100	94.262	ENSHGLG00100006056	RTCA	100	94.262	Heterocephalus_glaber_male
ENSPPYG00000001115	RTCA	100	64.754	ENSHCOG00000020628	rtca	89	64.754	Hippocampus_comes
ENSPPYG00000001115	RTCA	100	72.951	ENSIPUG00000024803	rtca	100	72.951	Ictalurus_punctatus
ENSPPYG00000001115	RTCA	100	88.251	ENSSTOG00000013528	-	100	88.251	Ictidomys_tridecemlineatus
ENSPPYG00000001115	RTCA	100	83.106	ENSSTOG00000033099	-	100	83.106	Ictidomys_tridecemlineatus
ENSPPYG00000001115	RTCA	100	66.393	ENSJJAG00000016178	Rtca	100	66.393	Jaculus_jaculus
ENSPPYG00000001115	RTCA	99	72.022	ENSKMAG00000006651	rtca	98	72.022	Kryptolebias_marmoratus
ENSPPYG00000001115	RTCA	88	68.536	ENSLBEG00000002448	-	99	68.536	Labrus_bergylta
ENSPPYG00000001115	RTCA	99	69.252	ENSLBEG00000028971	rtca	99	69.252	Labrus_bergylta
ENSPPYG00000001115	RTCA	100	77.869	ENSLACG00000013666	RTCA	100	77.869	Latimeria_chalumnae
ENSPPYG00000001115	RTCA	100	72.951	ENSLOCG00000000093	rtca	99	72.951	Lepisosteus_oculatus
ENSPPYG00000001115	RTCA	100	93.443	ENSLAFG00000001473	RTCA	100	93.443	Loxodonta_africana
ENSPPYG00000001115	RTCA	100	98.907	ENSMFAG00000034132	RTCA	100	98.907	Macaca_fascicularis
ENSPPYG00000001115	RTCA	100	98.361	ENSMMUG00000019105	RTCA	100	98.361	Macaca_mulatta
ENSPPYG00000001115	RTCA	84	98.706	ENSMNEG00000037163	RTCA	100	98.706	Macaca_nemestrina
ENSPPYG00000001115	RTCA	100	80.874	ENSMLEG00000042151	RTCA	100	80.874	Mandrillus_leucophaeus
ENSPPYG00000001115	RTCA	100	72.678	ENSMAMG00000016536	rtca	100	72.678	Mastacembelus_armatus
ENSPPYG00000001115	RTCA	100	70.492	ENSMZEG00005017945	rtca	99	70.492	Maylandia_zebra
ENSPPYG00000001115	RTCA	87	81.191	ENSMGAG00000006892	RTCA	99	81.191	Meleagris_gallopavo
ENSPPYG00000001115	RTCA	100	91.530	ENSMAUG00000008488	Rtca	100	91.530	Mesocricetus_auratus
ENSPPYG00000001115	RTCA	84	96.117	ENSMICG00000008643	RTCA	100	96.117	Microcebus_murinus
ENSPPYG00000001115	RTCA	100	91.803	ENSMOCG00000016660	Rtca	100	91.803	Microtus_ochrogaster
ENSPPYG00000001115	RTCA	84	71.521	ENSMMOG00000007750	rtca	100	71.521	Mola_mola
ENSPPYG00000001115	RTCA	100	90.164	ENSMODG00000003557	RTCA	100	90.164	Monodelphis_domestica
ENSPPYG00000001115	RTCA	100	72.131	ENSMALG00000020844	rtca	100	72.131	Monopterus_albus
ENSPPYG00000001115	RTCA	100	91.257	MGP_CAROLIEiJ_G0025565	Rtca	100	91.257	Mus_caroli
ENSPPYG00000001115	RTCA	100	90.710	ENSMUSG00000000339	Rtca	100	90.710	Mus_musculus
ENSPPYG00000001115	RTCA	100	90.984	MGP_PahariEiJ_G0027011	Rtca	100	90.984	Mus_pahari
ENSPPYG00000001115	RTCA	100	90.984	MGP_SPRETEiJ_G0026515	Rtca	100	90.984	Mus_spretus
ENSPPYG00000001115	RTCA	100	95.355	ENSMPUG00000012119	RTCA	100	95.355	Mustela_putorius_furo
ENSPPYG00000001115	RTCA	100	86.921	ENSMLUG00000009922	RTCA	100	86.921	Myotis_lucifugus
ENSPPYG00000001115	RTCA	100	91.803	ENSNGAG00000011540	Rtca	99	91.803	Nannospalax_galili
ENSPPYG00000001115	RTCA	100	70.492	ENSNBRG00000003062	rtca	99	70.492	Neolamprologus_brichardi
ENSPPYG00000001115	RTCA	100	99.180	ENSNLEG00000031426	RTCA	100	99.180	Nomascus_leucogenys
ENSPPYG00000001115	RTCA	58	95.122	ENSMEUG00000010030	-	77	72.727	Notamacropus_eugenii
ENSPPYG00000001115	RTCA	73	87.361	ENSOPRG00000012092	RTCA	71	87.361	Ochotona_princeps
ENSPPYG00000001115	RTCA	95	94.828	ENSODEG00000006990	RTCA	96	94.872	Octodon_degus
ENSPPYG00000001115	RTCA	100	70.492	ENSONIG00000007753	rtca	99	70.492	Oreochromis_niloticus
ENSPPYG00000001115	RTCA	87	87.066	ENSOANG00000012055	RTCA	98	87.066	Ornithorhynchus_anatinus
ENSPPYG00000001115	RTCA	100	95.628	ENSOCUG00000014247	RTCA	100	95.628	Oryctolagus_cuniculus
ENSPPYG00000001115	RTCA	100	70.492	ENSORLG00000013605	rtca	100	70.492	Oryzias_latipes
ENSPPYG00000001115	RTCA	100	70.492	ENSORLG00020001904	rtca	100	70.492	Oryzias_latipes_hni
ENSPPYG00000001115	RTCA	100	70.492	ENSORLG00015021064	rtca	100	70.492	Oryzias_latipes_hsok
ENSPPYG00000001115	RTCA	100	71.311	ENSOMEG00000000756	rtca	100	71.311	Oryzias_melastigma
ENSPPYG00000001115	RTCA	100	85.246	ENSOGAG00000005627	RTCA	100	85.246	Otolemur_garnettii
ENSPPYG00000001115	RTCA	87	94.340	ENSOARG00000018122	RTCA	100	94.340	Ovis_aries
ENSPPYG00000001115	RTCA	100	95.251	ENSPPAG00000035119	RTCA	100	98.706	Pan_paniscus
ENSPPYG00000001115	RTCA	100	95.082	ENSPPRG00000000350	RTCA	100	95.082	Panthera_pardus
ENSPPYG00000001115	RTCA	100	94.809	ENSPTIG00000012816	RTCA	100	94.809	Panthera_tigris_altaica
ENSPPYG00000001115	RTCA	100	95.251	ENSPTRG00000001004	RTCA	100	98.706	Pan_troglodytes
ENSPPYG00000001115	RTCA	100	98.087	ENSPANG00000000346	RTCA	100	98.087	Papio_anubis
ENSPPYG00000001115	RTCA	100	74.317	ENSPKIG00000001653	rtca	100	74.317	Paramormyrops_kingsleyae
ENSPPYG00000001115	RTCA	100	83.880	ENSPSIG00000011408	RTCA	100	83.880	Pelodiscus_sinensis
ENSPPYG00000001115	RTCA	100	90.984	ENSPEMG00000018582	Rtca	100	90.984	Peromyscus_maniculatus_bairdii
ENSPPYG00000001115	RTCA	99	58.840	ENSPMAG00000009110	rtca	99	58.630	Petromyzon_marinus
ENSPPYG00000001115	RTCA	100	90.437	ENSPCIG00000007684	RTCA	100	90.437	Phascolarctos_cinereus
ENSPPYG00000001115	RTCA	100	71.935	ENSPFOG00000004824	rtca	100	71.935	Poecilia_formosa
ENSPPYG00000001115	RTCA	100	72.131	ENSPLAG00000011753	rtca	99	72.131	Poecilia_latipinna
ENSPPYG00000001115	RTCA	100	72.131	ENSPMEG00000020469	rtca	99	72.131	Poecilia_mexicana
ENSPPYG00000001115	RTCA	100	72.951	ENSPREG00000001365	rtca	99	72.951	Poecilia_reticulata
ENSPPYG00000001115	RTCA	100	90.710	ENSPCAG00000005076	RTCA	100	90.710	Procavia_capensis
ENSPPYG00000001115	RTCA	100	96.721	ENSPCOG00000005603	RTCA	100	96.721	Propithecus_coquereli
ENSPPYG00000001115	RTCA	100	89.974	ENSPVAG00000009478	RTCA	100	89.974	Pteropus_vampyrus
ENSPPYG00000001115	RTCA	100	70.492	ENSPNYG00000004722	rtca	99	70.492	Pundamilia_nyererei
ENSPPYG00000001115	RTCA	100	72.678	ENSPNAG00000022270	rtca	100	72.678	Pygocentrus_nattereri
ENSPPYG00000001115	RTCA	100	90.984	ENSRNOG00000014575	Rtca	100	90.984	Rattus_norvegicus
ENSPPYG00000001115	RTCA	100	94.723	ENSRBIG00000041180	RTCA	100	97.735	Rhinopithecus_bieti
ENSPPYG00000001115	RTCA	100	98.087	ENSRROG00000024929	RTCA	100	98.087	Rhinopithecus_roxellana
ENSPPYG00000001115	RTCA	100	96.995	ENSSBOG00000028626	RTCA	100	96.995	Saimiri_boliviensis_boliviensis
ENSPPYG00000001115	RTCA	100	90.164	ENSSHAG00000001758	RTCA	100	90.164	Sarcophilus_harrisii
ENSPPYG00000001115	RTCA	98	69.167	ENSSMAG00000014680	rtca	97	69.167	Scophthalmus_maximus
ENSPPYG00000001115	RTCA	98	71.667	ENSSDUG00000015585	rtca	97	71.667	Seriola_dumerili
ENSPPYG00000001115	RTCA	96	71.795	ENSSLDG00000018985	rtca	95	71.795	Seriola_lalandi_dorsalis
ENSPPYG00000001115	RTCA	87	85.804	ENSSARG00000013993	RTCA	100	85.804	Sorex_araneus
ENSPPYG00000001115	RTCA	100	70.492	ENSSPAG00000011938	rtca	99	70.492	Stegastes_partitus
ENSPPYG00000001115	RTCA	100	94.809	ENSSSCG00000006865	RTCA	100	94.809	Sus_scrofa
ENSPPYG00000001115	RTCA	100	83.333	ENSTGUG00000005154	RTCA	100	83.333	Taeniopygia_guttata
ENSPPYG00000001115	RTCA	100	71.038	ENSTRUG00000008799	rtca	100	71.038	Takifugu_rubripes
ENSPPYG00000001115	RTCA	100	71.585	ENSTNIG00000004725	rtca	100	71.585	Tetraodon_nigroviridis
ENSPPYG00000001115	RTCA	59	82.727	ENSTBEG00000000943	RTCA	82	67.227	Tupaia_belangeri
ENSPPYG00000001115	RTCA	100	90.765	ENSTTRG00000015327	RTCA	100	90.765	Tursiops_truncatus
ENSPPYG00000001115	RTCA	94	92.420	ENSUAMG00000017265	RTCA	96	92.420	Ursus_americanus
ENSPPYG00000001115	RTCA	100	94.262	ENSUMAG00000007881	RTCA	100	94.262	Ursus_maritimus
ENSPPYG00000001115	RTCA	87	85.174	ENSVPAG00000001039	RTCA	84	85.174	Vicugna_pacos
ENSPPYG00000001115	RTCA	100	95.355	ENSVVUG00000022041	RTCA	68	95.355	Vulpes_vulpes
ENSPPYG00000001115	RTCA	99	65.123	ENSXETG00000031661	RTCA	99	65.123	Xenopus_tropicalis
ENSPPYG00000001115	RTCA	100	62.568	ENSXCOG00000008002	rtca	100	62.568	Xiphophorus_couchianus
ENSPPYG00000001115	RTCA	100	71.858	ENSXMAG00000005482	rtca	99	71.858	Xiphophorus_maculatus