EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPPYG00000001163 (Gene tree)
Gene ID: 100456535
Gene Symbol: HFM1
Alias: FLJ36760|FLJ39011|MER3|SEC63D1
Full Name: HFM1%2C ATP dependent DNA helicase homolog
Gene Type: protein_coding
Species: Pongo_abelii
Status: putative
Strand: Plus strand
Length: 141145 bases
Position: chr1:137430003-137571147
Accession: 100456535
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPPYP00000001347	ResIII	PF04851.15	6.2e-12	1	1
ENSPPYP00000001347	DEAD	PF00270.29	1.3e-25	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPPYT00000001392	HFM1-201	4825	XM_002810615	ENSPPYP00000001347	1434 (aa)	XP_002810661	H2N6T1

Gene Model

Click here to download ENSPPYG00000001163's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPPYG00000001163's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPPYG00000001163	HFM1	51	33.632	ENSPPYG00000016869	ASCC3	61	33.632
ENSPPYG00000001163	HFM1	61	31.373	ENSPPYG00000012068	SNRNP200	77	31.373

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPPYG00000001163	HFM1	100	98.328	ENSG00000162669	HFM1	100	98.328	Homo_sapiens
ENSPPYG00000001163	HFM1	64	65.192	ENSAPOG00000005304	hfm1	100	65.192	Acanthochromis_polyacanthus
ENSPPYG00000001163	HFM1	100	86.310	ENSAMEG00000000432	HFM1	100	86.310	Ailuropoda_melanoleuca
ENSPPYG00000001163	HFM1	70	60.467	ENSACIG00000021553	hfm1	91	60.467	Amphilophus_citrinellus
ENSPPYG00000001163	HFM1	64	65.811	ENSAOCG00000022839	hfm1	100	65.811	Amphiprion_ocellaris
ENSPPYG00000001163	HFM1	64	65.461	ENSAPEG00000014316	hfm1	100	65.461	Amphiprion_percula
ENSPPYG00000001163	HFM1	67	64.293	ENSATEG00000019181	hfm1	80	63.428	Anabas_testudineus
ENSPPYG00000001163	HFM1	100	60.233	ENSAPLG00000013639	HFM1	100	60.233	Anas_platyrhynchos
ENSPPYG00000001163	HFM1	100	91.580	ENSANAG00000029513	HFM1	100	91.580	Aotus_nancymaae
ENSPPYG00000001163	HFM1	70	60.000	ENSACLG00000009033	hfm1	97	65.394	Astatotilapia_calliptera
ENSPPYG00000001163	HFM1	93	51.933	ENSAMXG00000006108	hfm1	90	51.933	Astyanax_mexicanus
ENSPPYG00000001163	HFM1	100	84.792	ENSBTAG00000020856	HFM1	100	84.792	Bos_taurus
ENSPPYG00000001163	HFM1	100	93.659	ENSCJAG00000001843	HFM1	100	93.659	Callithrix_jacchus
ENSPPYG00000001163	HFM1	100	85.823	ENSCAFG00000020187	HFM1	100	85.823	Canis_familiaris
ENSPPYG00000001163	HFM1	100	87.005	ENSTSYG00000014250	HFM1	100	87.005	Carlito_syrichta
ENSPPYG00000001163	HFM1	99	78.706	ENSCPOG00000007421	HFM1	99	78.706	Cavia_porcellus
ENSPPYG00000001163	HFM1	100	93.449	ENSCCAG00000033206	HFM1	100	93.449	Cebus_capucinus
ENSPPYG00000001163	HFM1	100	96.376	ENSCATG00000030987	HFM1	100	96.376	Cercocebus_atys
ENSPPYG00000001163	HFM1	100	80.972	ENSCLAG00000005173	HFM1	99	80.972	Chinchilla_lanigera
ENSPPYG00000001163	HFM1	68	96.053	ENSCHOG00000011824	-	77	96.053	Choloepus_hoffmanni
ENSPPYG00000001163	HFM1	100	73.670	ENSCGRG00001016995	Hfm1	100	73.670	Cricetulus_griseus_chok1gshd
ENSPPYG00000001163	HFM1	100	77.832	ENSCGRG00000017181	Hfm1	100	77.832	Cricetulus_griseus_crigri
ENSPPYG00000001163	HFM1	70	60.718	ENSCSEG00000017659	hfm1	93	60.718	Cynoglossus_semilaevis
ENSPPYG00000001163	HFM1	50	69.144	ENSCVAG00000005075	hfm1	86	69.144	Cyprinodon_variegatus
ENSPPYG00000001163	HFM1	76	55.204	ENSDARG00000104288	hfm1	96	55.204	Danio_rerio
ENSPPYG00000001163	HFM1	100	80.795	ENSDNOG00000004776	HFM1	100	80.795	Dasypus_novemcinctus
ENSPPYG00000001163	HFM1	100	78.503	ENSDORG00000014661	Hfm1	100	78.503	Dipodomys_ordii
ENSPPYG00000001163	HFM1	70	85.390	ENSEASG00005015424	HFM1	98	84.565	Equus_asinus_asinus
ENSPPYG00000001163	HFM1	100	84.579	ENSECAG00000024039	HFM1	100	84.579	Equus_caballus
ENSPPYG00000001163	HFM1	63	67.069	ENSELUG00000018944	hfm1	97	67.069	Esox_lucius
ENSPPYG00000001163	HFM1	100	86.042	ENSFCAG00000029116	HFM1	100	86.042	Felis_catus
ENSPPYG00000001163	HFM1	100	59.728	ENSFALG00000001781	HFM1	100	60.137	Ficedula_albicollis
ENSPPYG00000001163	HFM1	100	79.584	ENSFDAG00000020816	HFM1	100	79.584	Fukomys_damarensis
ENSPPYG00000001163	HFM1	66	60.625	ENSGMOG00000017436	hfm1	100	60.625	Gadus_morhua
ENSPPYG00000001163	HFM1	71	62.112	ENSGAFG00000018093	hfm1	93	67.231	Gambusia_affinis
ENSPPYG00000001163	HFM1	66	62.215	ENSGACG00000015686	hfm1	100	62.215	Gasterosteus_aculeatus
ENSPPYG00000001163	HFM1	100	98.118	ENSGGOG00000038524	HFM1	100	98.118	Gorilla_gorilla
ENSPPYG00000001163	HFM1	70	60.985	ENSHBUG00000007309	hfm1	97	59.924	Haplochromis_burtoni
ENSPPYG00000001163	HFM1	57	64.093	ENSHCOG00000019632	hfm1	97	64.093	Hippocampus_comes
ENSPPYG00000001163	HFM1	66	64.465	ENSIPUG00000017020	hfm1	92	65.714	Ictalurus_punctatus
ENSPPYG00000001163	HFM1	100	77.871	ENSJJAG00000017198	Hfm1	100	77.871	Jaculus_jaculus
ENSPPYG00000001163	HFM1	62	63.747	ENSKMAG00000002282	hfm1	90	63.818	Kryptolebias_marmoratus
ENSPPYG00000001163	HFM1	70	60.806	ENSLBEG00000006759	hfm1	98	65.416	Labrus_bergylta
ENSPPYG00000001163	HFM1	66	70.661	ENSLACG00000010698	HFM1	99	66.825	Latimeria_chalumnae
ENSPPYG00000001163	HFM1	71	64.990	ENSLOCG00000004931	hfm1	95	65.087	Lepisosteus_oculatus
ENSPPYG00000001163	HFM1	52	90.040	ENSLAFG00000015903	-	99	90.040	Loxodonta_africana
ENSPPYG00000001163	HFM1	100	92.922	ENSMFAG00000003649	HFM1	100	92.922	Macaca_fascicularis
ENSPPYG00000001163	HFM1	100	95.889	ENSMMUG00000006819	HFM1	100	95.889	Macaca_mulatta
ENSPPYG00000001163	HFM1	54	70.475	ENSMAMG00000004623	hfm1	97	66.908	Mastacembelus_armatus
ENSPPYG00000001163	HFM1	70	60.000	ENSMZEG00005004679	hfm1	97	65.394	Maylandia_zebra
ENSPPYG00000001163	HFM1	54	77.423	ENSMGAG00000008437	HFM1	98	77.423	Meleagris_gallopavo
ENSPPYG00000001163	HFM1	100	77.639	ENSMAUG00000018858	Hfm1	100	77.639	Mesocricetus_auratus
ENSPPYG00000001163	HFM1	100	88.117	ENSMICG00000037935	HFM1	100	88.117	Microcebus_murinus
ENSPPYG00000001163	HFM1	100	75.800	ENSMOCG00000014812	Hfm1	100	75.800	Microtus_ochrogaster
ENSPPYG00000001163	HFM1	62	64.085	ENSMMOG00000006148	hfm1	96	64.426	Mola_mola
ENSPPYG00000001163	HFM1	65	64.141	ENSMALG00000002401	hfm1	96	65.618	Monopterus_albus
ENSPPYG00000001163	HFM1	94	71.866	MGP_CAROLIEiJ_G0027496	Hfm1	100	71.866	Mus_caroli
ENSPPYG00000001163	HFM1	100	76.426	ENSMUSG00000043410	Hfm1	100	76.426	Mus_musculus
ENSPPYG00000001163	HFM1	100	76.426	MGP_PahariEiJ_G0017268	Hfm1	100	76.426	Mus_pahari
ENSPPYG00000001163	HFM1	100	76.147	MGP_SPRETEiJ_G0028495	Hfm1	100	76.147	Mus_spretus
ENSPPYG00000001163	HFM1	100	82.020	ENSMPUG00000004594	HFM1	100	82.020	Mustela_putorius_furo
ENSPPYG00000001163	HFM1	100	83.622	ENSMLUG00000010200	HFM1	100	83.622	Myotis_lucifugus
ENSPPYG00000001163	HFM1	70	56.905	ENSNBRG00000002910	hfm1	97	65.818	Neolamprologus_brichardi
ENSPPYG00000001163	HFM1	100	93.389	ENSNLEG00000010285	HFM1	100	93.389	Nomascus_leucogenys
ENSPPYG00000001163	HFM1	84	66.954	ENSMEUG00000015788	HFM1	84	66.954	Notamacropus_eugenii
ENSPPYG00000001163	HFM1	84	78.986	ENSOPRG00000013916	HFM1	84	78.986	Ochotona_princeps
ENSPPYG00000001163	HFM1	71	62.268	ENSONIG00000010590	hfm1	99	62.222	Oreochromis_niloticus
ENSPPYG00000001163	HFM1	57	65.806	ENSORLG00000026844	hfm1	99	65.806	Oryzias_latipes
ENSPPYG00000001163	HFM1	67	56.832	ENSORLG00020002951	hfm1	77	56.397	Oryzias_latipes_hni
ENSPPYG00000001163	HFM1	72	59.012	ENSOMEG00000016474	hfm1	90	52.113	Oryzias_melastigma
ENSPPYG00000001163	HFM1	85	88.599	ENSOGAG00000032369	HFM1	100	88.599	Otolemur_garnettii
ENSPPYG00000001163	HFM1	100	85.080	ENSOARG00000015812	HFM1	100	85.080	Ovis_aries
ENSPPYG00000001163	HFM1	92	98.792	ENSPPAG00000024582	HFM1	100	98.792	Pan_paniscus
ENSPPYG00000001163	HFM1	100	85.972	ENSPPRG00000003270	HFM1	100	85.972	Panthera_pardus
ENSPPYG00000001163	HFM1	100	85.903	ENSPTIG00000018881	HFM1	100	85.903	Panthera_tigris_altaica
ENSPPYG00000001163	HFM1	100	98.397	ENSPTRG00000000948	HFM1	100	98.397	Pan_troglodytes
ENSPPYG00000001163	HFM1	100	96.237	ENSPANG00000009838	HFM1	100	96.237	Papio_anubis
ENSPPYG00000001163	HFM1	62	67.303	ENSPKIG00000003810	hfm1	95	67.836	Paramormyrops_kingsleyae
ENSPPYG00000001163	HFM1	58	66.264	ENSPMGG00000011059	hfm1	100	66.264	Periophthalmus_magnuspinnatus
ENSPPYG00000001163	HFM1	100	79.764	ENSPEMG00000022852	Hfm1	100	79.764	Peromyscus_maniculatus_bairdii
ENSPPYG00000001163	HFM1	100	66.734	ENSPCIG00000014233	HFM1	100	66.734	Phascolarctos_cinereus
ENSPPYG00000001163	HFM1	70	62.736	ENSPFOG00000017194	hfm1	99	62.736	Poecilia_formosa
ENSPPYG00000001163	HFM1	71	64.098	ENSPLAG00000000571	hfm1	92	64.098	Poecilia_latipinna
ENSPPYG00000001163	HFM1	71	63.751	ENSPMEG00000019475	hfm1	92	63.751	Poecilia_mexicana
ENSPPYG00000001163	HFM1	70	63.941	ENSPREG00000007803	hfm1	93	66.949	Poecilia_reticulata
ENSPPYG00000001163	HFM1	74	81.982	ENSPCAG00000004289	-	74	81.982	Procavia_capensis
ENSPPYG00000001163	HFM1	100	77.731	ENSPVAG00000009713	HFM1	100	77.731	Pteropus_vampyrus
ENSPPYG00000001163	HFM1	70	59.803	ENSPNYG00000001795	hfm1	97	65.274	Pundamilia_nyererei
ENSPPYG00000001163	HFM1	59	67.494	ENSPNAG00000010865	hfm1	84	67.494	Pygocentrus_nattereri
ENSPPYG00000001163	HFM1	100	75.661	ENSRNOG00000023299	Hfm1	100	75.661	Rattus_norvegicus
ENSPPYG00000001163	HFM1	100	96.446	ENSRROG00000045569	HFM1	100	96.446	Rhinopithecus_roxellana
ENSPPYG00000001163	HFM1	100	90.801	ENSSBOG00000027456	HFM1	100	90.801	Saimiri_boliviensis_boliviensis
ENSPPYG00000001163	HFM1	60	71.329	ENSSHAG00000014616	-	98	71.329	Sarcophilus_harrisii
ENSPPYG00000001163	HFM1	86	56.463	ENSSFOG00015020129	hfm1	96	56.463	Scleropages_formosus
ENSPPYG00000001163	HFM1	62	64.804	ENSSMAG00000006907	hfm1	87	64.804	Scophthalmus_maximus
ENSPPYG00000001163	HFM1	59	65.202	ENSSDUG00000011424	hfm1	100	65.202	Seriola_dumerili
ENSPPYG00000001163	HFM1	58	66.265	ENSSLDG00000016386	hfm1	100	66.265	Seriola_lalandi_dorsalis
ENSPPYG00000001163	HFM1	62	66.787	ENSSPAG00000001023	hfm1	100	66.787	Stegastes_partitus
ENSPPYG00000001163	HFM1	100	81.818	ENSSSCG00000006912	HFM1	100	81.818	Sus_scrofa
ENSPPYG00000001163	HFM1	66	75.131	ENSTGUG00000006172	HFM1	100	75.131	Taeniopygia_guttata
ENSPPYG00000001163	HFM1	100	82.083	ENSTTRG00000013933	HFM1	100	82.083	Tursiops_truncatus
ENSPPYG00000001163	HFM1	93	84.157	ENSVPAG00000011331	HFM1	93	84.157	Vicugna_pacos
ENSPPYG00000001163	HFM1	71	82.865	ENSVVUG00000020760	HFM1	99	82.865	Vulpes_vulpes
ENSPPYG00000001163	HFM1	58	66.945	ENSXMAG00000004178	hfm1	92	66.945	Xiphophorus_maculatus