EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSPPYG00000001348 (Gene tree)
Gene ID: 100171974
Gene Symbol: PRPF38A
Alias: FLJ14936|Prp38
Full Name: pre-mRNA processing factor 38A
Gene Type: protein_coding
Species: Pongo_abelii
Status: putative
Strand: Minus strand
Length: 16038 bases
Position: chr1:177326789-177342826
Accession: 25930
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPPYP00000001567	PRP38	PF03371.15	1.1e-40	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPPYT00000001616	PRPF38A-201	5460	-	ENSPPYP00000001567	313 (aa)	-	H2N7E1

Gene Model

Click here to download ENSPPYG00000001348's gene model file

Pathways

Pathway ID	Pathway Name	Source
pon03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPPYG00000001348's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPPYG00000001348	PRPF38A	100	91.483	ENSG00000134748	PRPF38A	100	91.483	Homo_sapiens
ENSPPYG00000001348	PRPF38A	71	77.434	ENSAPOG00000011652	prpf38a	100	73.899	Acanthochromis_polyacanthus
ENSPPYG00000001348	PRPF38A	100	91.483	ENSAMEG00000009319	PRPF38A	100	91.483	Ailuropoda_melanoleuca
ENSPPYG00000001348	PRPF38A	71	75.221	ENSACIG00000012292	prpf38a	76	75.000	Amphilophus_citrinellus
ENSPPYG00000001348	PRPF38A	71	77.434	ENSAOCG00000018004	prpf38a	100	73.899	Amphiprion_ocellaris
ENSPPYG00000001348	PRPF38A	71	77.434	ENSAPEG00000021414	prpf38a	100	73.899	Amphiprion_percula
ENSPPYG00000001348	PRPF38A	71	77.434	ENSATEG00000004608	prpf38a	100	73.585	Anabas_testudineus
ENSPPYG00000001348	PRPF38A	77	96.721	ENSAPLG00000005827	PRPF38A	98	96.721	Anas_platyrhynchos
ENSPPYG00000001348	PRPF38A	100	87.382	ENSACAG00000008249	PRPF38A	100	87.382	Anolis_carolinensis
ENSPPYG00000001348	PRPF38A	100	64.890	ENSANAG00000029204	-	100	59.561	Aotus_nancymaae
ENSPPYG00000001348	PRPF38A	100	91.483	ENSANAG00000027839	PRPF38A	100	91.483	Aotus_nancymaae
ENSPPYG00000001348	PRPF38A	71	75.221	ENSACLG00000021595	prpf38a	100	72.327	Astatotilapia_calliptera
ENSPPYG00000001348	PRPF38A	100	74.528	ENSAMXG00000029274	prpf38a	100	74.528	Astyanax_mexicanus
ENSPPYG00000001348	PRPF38A	100	91.483	ENSBTAG00000002720	PRPF38A	100	91.483	Bos_taurus
ENSPPYG00000001348	PRPF38A	63	52.764	WBGene00008380	prp-38	67	52.727	Caenorhabditis_elegans
ENSPPYG00000001348	PRPF38A	100	91.483	ENSCJAG00000021594	PRPF38A	100	91.483	Callithrix_jacchus
ENSPPYG00000001348	PRPF38A	100	91.483	ENSCAFG00000003740	PRPF38A	100	91.483	Canis_familiaris
ENSPPYG00000001348	PRPF38A	100	91.483	ENSCAFG00020010939	PRPF38A	100	91.483	Canis_lupus_dingo
ENSPPYG00000001348	PRPF38A	100	91.483	ENSCHIG00000024730	PRPF38A	100	91.483	Capra_hircus
ENSPPYG00000001348	PRPF38A	86	95.572	ENSTSYG00000031994	-	95	95.572	Carlito_syrichta
ENSPPYG00000001348	PRPF38A	100	91.483	ENSTSYG00000009868	-	100	91.483	Carlito_syrichta
ENSPPYG00000001348	PRPF38A	100	91.483	ENSCPOG00000005079	PRPF38A	100	91.483	Cavia_porcellus
ENSPPYG00000001348	PRPF38A	100	90.536	ENSCCAG00000026502	PRPF38A	100	90.536	Cebus_capucinus
ENSPPYG00000001348	PRPF38A	89	66.192	ENSCATG00000044190	-	92	65.836	Cercocebus_atys
ENSPPYG00000001348	PRPF38A	100	91.483	ENSCATG00000032296	PRPF38A	100	91.483	Cercocebus_atys
ENSPPYG00000001348	PRPF38A	100	91.483	ENSCLAG00000005816	PRPF38A	100	91.483	Chinchilla_lanigera
ENSPPYG00000001348	PRPF38A	78	92.466	ENSCHOG00000008388	PRPF38A	77	93.151	Choloepus_hoffmanni
ENSPPYG00000001348	PRPF38A	100	89.590	ENSCPBG00000014791	PRPF38A	100	89.590	Chrysemys_picta_bellii
ENSPPYG00000001348	PRPF38A	67	61.395	ENSCSAVG00000009580	-	78	56.846	Ciona_savignyi
ENSPPYG00000001348	PRPF38A	96	91.118	ENSCANG00000032608	PRPF38A	100	91.118	Colobus_angolensis_palliatus
ENSPPYG00000001348	PRPF38A	74	74.894	ENSCGRG00001002557	-	78	74.894	Cricetulus_griseus_chok1gshd
ENSPPYG00000001348	PRPF38A	100	91.167	ENSCGRG00001018502	-	100	91.167	Cricetulus_griseus_chok1gshd
ENSPPYG00000001348	PRPF38A	100	91.167	ENSCGRG00000014868	Prpf38a	100	91.167	Cricetulus_griseus_crigri
ENSPPYG00000001348	PRPF38A	71	76.549	ENSCSEG00000001269	prpf38a	79	76.271	Cynoglossus_semilaevis
ENSPPYG00000001348	PRPF38A	71	79.204	ENSCVAG00000012305	prpf38a	100	74.528	Cyprinodon_variegatus
ENSPPYG00000001348	PRPF38A	100	74.214	ENSDARG00000039213	prpf38a	100	74.214	Danio_rerio
ENSPPYG00000001348	PRPF38A	100	91.483	ENSDNOG00000042326	PRPF38A	100	91.483	Dasypus_novemcinctus
ENSPPYG00000001348	PRPF38A	100	78.233	ENSDORG00000023857	-	100	78.233	Dipodomys_ordii
ENSPPYG00000001348	PRPF38A	84	73.881	ENSDORG00000025371	-	78	76.724	Dipodomys_ordii
ENSPPYG00000001348	PRPF38A	84	73.881	ENSDORG00000023691	-	78	76.724	Dipodomys_ordii
ENSPPYG00000001348	PRPF38A	63	65.842	FBgn0050342	Prp38	57	66.321	Drosophila_melanogaster
ENSPPYG00000001348	PRPF38A	76	70.782	ENSEBUG00000012588	prpf38a	75	70.588	Eptatretus_burgeri
ENSPPYG00000001348	PRPF38A	100	91.483	ENSEASG00005014427	PRPF38A	100	91.483	Equus_asinus_asinus
ENSPPYG00000001348	PRPF38A	100	91.483	ENSECAG00000022628	PRPF38A	100	91.483	Equus_caballus
ENSPPYG00000001348	PRPF38A	71	75.664	ENSELUG00000021094	prpf38a	100	72.642	Esox_lucius
ENSPPYG00000001348	PRPF38A	100	91.483	ENSFCAG00000002518	PRPF38A	100	91.483	Felis_catus
ENSPPYG00000001348	PRPF38A	86	93.040	ENSFALG00000005598	-	100	93.040	Ficedula_albicollis
ENSPPYG00000001348	PRPF38A	99	77.215	ENSFALG00000003612	-	77	79.661	Ficedula_albicollis
ENSPPYG00000001348	PRPF38A	100	91.167	ENSFDAG00000011287	PRPF38A	100	91.167	Fukomys_damarensis
ENSPPYG00000001348	PRPF38A	84	69.517	ENSFHEG00000014317	prpf38a	78	77.966	Fundulus_heteroclitus
ENSPPYG00000001348	PRPF38A	53	79.532	ENSGMOG00000011384	prpf38a	54	79.532	Gadus_morhua
ENSPPYG00000001348	PRPF38A	100	89.274	ENSGALG00000010627	PRPF38A	100	89.274	Gallus_gallus
ENSPPYG00000001348	PRPF38A	71	79.204	ENSGAFG00000012422	prpf38a	100	74.528	Gambusia_affinis
ENSPPYG00000001348	PRPF38A	71	75.000	ENSGACG00000005423	prpf38a	100	71.562	Gasterosteus_aculeatus
ENSPPYG00000001348	PRPF38A	100	89.905	ENSGAGG00000020547	PRPF38A	100	89.905	Gopherus_agassizii
ENSPPYG00000001348	PRPF38A	100	91.483	ENSGGOG00000003940	PRPF38A	100	91.483	Gorilla_gorilla
ENSPPYG00000001348	PRPF38A	61	77.835	ENSHBUG00000020572	prpf38a	80	77.720	Haplochromis_burtoni
ENSPPYG00000001348	PRPF38A	100	75.238	ENSHGLG00000007918	-	100	74.921	Heterocephalus_glaber_female
ENSPPYG00000001348	PRPF38A	100	91.483	ENSHGLG00000000475	PRPF38A	100	91.483	Heterocephalus_glaber_female
ENSPPYG00000001348	PRPF38A	100	91.483	ENSHGLG00100008935	PRPF38A	100	91.483	Heterocephalus_glaber_male
ENSPPYG00000001348	PRPF38A	100	75.238	ENSHGLG00100003928	-	100	74.921	Heterocephalus_glaber_male
ENSPPYG00000001348	PRPF38A	87	61.011	ENSHCOG00000020781	prpf38a	59	77.720	Hippocampus_comes
ENSPPYG00000001348	PRPF38A	74	76.793	ENSIPUG00000005757	prpf38a	75	76.371	Ictalurus_punctatus
ENSPPYG00000001348	PRPF38A	100	91.483	ENSSTOG00000015610	PRPF38A	100	91.483	Ictidomys_tridecemlineatus
ENSPPYG00000001348	PRPF38A	100	90.221	ENSJJAG00000015811	Prpf38a	100	90.221	Jaculus_jaculus
ENSPPYG00000001348	PRPF38A	71	78.761	ENSKMAG00000006588	prpf38a	100	74.214	Kryptolebias_marmoratus
ENSPPYG00000001348	PRPF38A	96	70.957	ENSLBEG00000020585	prpf38a	100	71.698	Labrus_bergylta
ENSPPYG00000001348	PRPF38A	100	84.227	ENSLACG00000011495	PRPF38A	100	84.227	Latimeria_chalumnae
ENSPPYG00000001348	PRPF38A	100	72.327	ENSLOCG00000006262	prpf38a	100	73.270	Lepisosteus_oculatus
ENSPPYG00000001348	PRPF38A	100	91.483	ENSLAFG00000025862	PRPF38A	100	91.483	Loxodonta_africana
ENSPPYG00000001348	PRPF38A	100	91.483	ENSMFAG00000039449	PRPF38A	100	91.483	Macaca_fascicularis
ENSPPYG00000001348	PRPF38A	87	95.620	ENSMMUG00000014333	PRPF38A	98	95.620	Macaca_mulatta
ENSPPYG00000001348	PRPF38A	100	91.483	ENSMNEG00000031221	PRPF38A	100	91.483	Macaca_nemestrina
ENSPPYG00000001348	PRPF38A	100	62.342	ENSMNEG00000040242	-	100	61.392	Macaca_nemestrina
ENSPPYG00000001348	PRPF38A	100	91.483	ENSMLEG00000041105	PRPF38A	100	91.483	Mandrillus_leucophaeus
ENSPPYG00000001348	PRPF38A	71	76.991	ENSMAMG00000015431	prpf38a	100	73.585	Mastacembelus_armatus
ENSPPYG00000001348	PRPF38A	71	75.221	ENSMZEG00005017838	prpf38a	100	72.327	Maylandia_zebra
ENSPPYG00000001348	PRPF38A	96	88.816	ENSMGAG00000011176	PRPF38A	100	88.816	Meleagris_gallopavo
ENSPPYG00000001348	PRPF38A	85	84.758	ENSMAUG00000018029	-	87	83.475	Mesocricetus_auratus
ENSPPYG00000001348	PRPF38A	100	91.483	ENSMICG00000014193	PRPF38A	100	91.483	Microcebus_murinus
ENSPPYG00000001348	PRPF38A	100	91.167	ENSMOCG00000013080	Prpf38a	100	91.167	Microtus_ochrogaster
ENSPPYG00000001348	PRPF38A	83	72.243	ENSMMOG00000016972	prpf38a	81	76.695	Mola_mola
ENSPPYG00000001348	PRPF38A	100	88.365	ENSMODG00000000644	PRPF38A	100	88.679	Monodelphis_domestica
ENSPPYG00000001348	PRPF38A	71	77.434	ENSMALG00000019363	prpf38a	97	73.899	Monopterus_albus
ENSPPYG00000001348	PRPF38A	100	90.221	MGP_CAROLIEiJ_G0026269	Prpf38a	100	90.221	Mus_caroli
ENSPPYG00000001348	PRPF38A	100	90.221	ENSMUSG00000063800	Prpf38a	100	90.221	Mus_musculus
ENSPPYG00000001348	PRPF38A	100	90.221	MGP_PahariEiJ_G0028602	Prpf38a	100	90.221	Mus_pahari
ENSPPYG00000001348	PRPF38A	100	89.905	MGP_SPRETEiJ_G0027238	Prpf38a	100	89.905	Mus_spretus
ENSPPYG00000001348	PRPF38A	100	91.483	ENSMPUG00000006896	PRPF38A	100	91.483	Mustela_putorius_furo
ENSPPYG00000001348	PRPF38A	100	91.167	ENSNGAG00000011884	Prpf38a	100	91.167	Nannospalax_galili
ENSPPYG00000001348	PRPF38A	71	73.894	ENSNBRG00000004013	prpf38a	74	73.729	Neolamprologus_brichardi
ENSPPYG00000001348	PRPF38A	100	62.658	ENSNLEG00000033398	-	94	62.658	Nomascus_leucogenys
ENSPPYG00000001348	PRPF38A	97	69.836	ENSNLEG00000012592	-	99	69.836	Nomascus_leucogenys
ENSPPYG00000001348	PRPF38A	89	96.466	ENSNLEG00000017999	PRPF38A	90	96.466	Nomascus_leucogenys
ENSPPYG00000001348	PRPF38A	100	86.435	ENSMEUG00000003860	PRPF38A	100	86.435	Notamacropus_eugenii
ENSPPYG00000001348	PRPF38A	73	88.034	ENSOPRG00000008985	PRPF38A	96	88.136	Ochotona_princeps
ENSPPYG00000001348	PRPF38A	100	91.483	ENSODEG00000005869	PRPF38A	100	91.483	Octodon_degus
ENSPPYG00000001348	PRPF38A	71	75.664	ENSONIG00000007816	prpf38a	100	72.642	Oreochromis_niloticus
ENSPPYG00000001348	PRPF38A	100	59.748	ENSOANG00000009541	-	100	59.748	Ornithorhynchus_anatinus
ENSPPYG00000001348	PRPF38A	100	91.483	ENSOCUG00000000963	PRPF38A	100	91.483	Oryctolagus_cuniculus
ENSPPYG00000001348	PRPF38A	96	74.098	ENSORLG00000013485	prpf38a	99	74.448	Oryzias_latipes
ENSPPYG00000001348	PRPF38A	96	74.098	ENSORLG00020002130	prpf38a	99	74.448	Oryzias_latipes_hni
ENSPPYG00000001348	PRPF38A	96	73.770	ENSORLG00015021393	prpf38a	99	74.132	Oryzias_latipes_hsok
ENSPPYG00000001348	PRPF38A	96	73.597	ENSOMEG00000016333	prpf38a	100	73.899	Oryzias_melastigma
ENSPPYG00000001348	PRPF38A	100	91.483	ENSOGAG00000005423	PRPF38A	100	91.483	Otolemur_garnettii
ENSPPYG00000001348	PRPF38A	100	91.483	ENSOARG00000005373	PRPF38A	100	91.483	Ovis_aries
ENSPPYG00000001348	PRPF38A	100	91.483	ENSPPAG00000030905	PRPF38A	100	91.483	Pan_paniscus
ENSPPYG00000001348	PRPF38A	100	70.032	ENSPPAG00000033867	-	100	70.032	Pan_paniscus
ENSPPYG00000001348	PRPF38A	100	91.483	ENSPPRG00000013268	PRPF38A	100	91.483	Panthera_pardus
ENSPPYG00000001348	PRPF38A	100	91.483	ENSPTIG00000015419	PRPF38A	100	91.483	Panthera_tigris_altaica
ENSPPYG00000001348	PRPF38A	100	91.483	ENSPTRG00000000739	PRPF38A	100	91.483	Pan_troglodytes
ENSPPYG00000001348	PRPF38A	100	91.483	ENSPANG00000015483	PRPF38A	100	91.483	Papio_anubis
ENSPPYG00000001348	PRPF38A	100	70.978	ENSPKIG00000011439	prpf38a	100	72.240	Paramormyrops_kingsleyae
ENSPPYG00000001348	PRPF38A	100	89.274	ENSPSIG00000017487	PRPF38A	100	89.274	Pelodiscus_sinensis
ENSPPYG00000001348	PRPF38A	70	77.928	ENSPMGG00000021352	prpf38a	99	70.701	Periophthalmus_magnuspinnatus
ENSPPYG00000001348	PRPF38A	100	91.167	ENSPEMG00000023277	-	100	91.167	Peromyscus_maniculatus_bairdii
ENSPPYG00000001348	PRPF38A	100	84.013	ENSPEMG00000011212	-	100	83.072	Peromyscus_maniculatus_bairdii
ENSPPYG00000001348	PRPF38A	100	88.050	ENSPCIG00000022369	-	100	88.365	Phascolarctos_cinereus
ENSPPYG00000001348	PRPF38A	83	71.970	ENSPFOG00000004248	prpf38a	100	74.528	Poecilia_formosa
ENSPPYG00000001348	PRPF38A	92	68.456	ENSPLAG00000010328	prpf38a	100	74.528	Poecilia_latipinna
ENSPPYG00000001348	PRPF38A	84	70.111	ENSPMEG00000011804	prpf38a	100	74.528	Poecilia_mexicana
ENSPPYG00000001348	PRPF38A	83	68.657	ENSPREG00000002835	prpf38a	58	80.829	Poecilia_reticulata
ENSPPYG00000001348	PRPF38A	100	90.852	ENSPCAG00000013328	PRPF38A	100	90.852	Procavia_capensis
ENSPPYG00000001348	PRPF38A	100	91.483	ENSPCOG00000016387	-	100	91.483	Propithecus_coquereli
ENSPPYG00000001348	PRPF38A	100	69.716	ENSPCOG00000020709	-	76	71.610	Propithecus_coquereli
ENSPPYG00000001348	PRPF38A	100	91.483	ENSPVAG00000009803	PRPF38A	100	91.483	Pteropus_vampyrus
ENSPPYG00000001348	PRPF38A	71	75.221	ENSPNYG00000005571	prpf38a	100	72.327	Pundamilia_nyererei
ENSPPYG00000001348	PRPF38A	100	74.528	ENSPNAG00000010399	prpf38a	100	74.528	Pygocentrus_nattereri
ENSPPYG00000001348	PRPF38A	100	90.852	ENSRNOG00000009451	Prpf38a	100	90.852	Rattus_norvegicus
ENSPPYG00000001348	PRPF38A	100	91.483	ENSRBIG00000036442	PRPF38A	100	91.483	Rhinopithecus_bieti
ENSPPYG00000001348	PRPF38A	100	55.873	ENSRBIG00000034053	-	57	78.322	Rhinopithecus_bieti
ENSPPYG00000001348	PRPF38A	100	91.483	ENSRROG00000032788	PRPF38A	100	91.483	Rhinopithecus_roxellana
ENSPPYG00000001348	PRPF38A	98	73.548	ENSRROG00000040003	-	99	73.548	Rhinopithecus_roxellana
ENSPPYG00000001348	PRPF38A	100	56.782	ENSRROG00000034606	-	56	77.622	Rhinopithecus_roxellana
ENSPPYG00000001348	PRPF38A	100	91.483	ENSSBOG00000019515	PRPF38A	100	91.483	Saimiri_boliviensis_boliviensis
ENSPPYG00000001348	PRPF38A	86	92.308	ENSSHAG00000006906	-	100	92.674	Sarcophilus_harrisii
ENSPPYG00000001348	PRPF38A	96	64.078	ENSSHAG00000006029	-	74	72.124	Sarcophilus_harrisii
ENSPPYG00000001348	PRPF38A	100	70.755	ENSSFOG00015013572	prpf38a	100	71.069	Scleropages_formosus
ENSPPYG00000001348	PRPF38A	71	77.434	ENSSMAG00000015379	prpf38a	75	77.119	Scophthalmus_maximus
ENSPPYG00000001348	PRPF38A	71	77.876	ENSSDUG00000001324	prpf38a	100	74.214	Seriola_dumerili
ENSPPYG00000001348	PRPF38A	71	77.876	ENSSLDG00000014803	prpf38a	100	74.214	Seriola_lalandi_dorsalis
ENSPPYG00000001348	PRPF38A	83	100.000	ENSSARG00000014458	PRPF38A	69	100.000	Sorex_araneus
ENSPPYG00000001348	PRPF38A	100	87.697	ENSSPUG00000013259	PRPF38A	100	87.697	Sphenodon_punctatus
ENSPPYG00000001348	PRPF38A	71	59.735	ENSSPAG00000010449	prpf38a	72	60.169	Stegastes_partitus
ENSPPYG00000001348	PRPF38A	100	91.483	ENSSSCG00000028288	PRPF38A	100	91.483	Sus_scrofa
ENSPPYG00000001348	PRPF38A	100	84.211	ENSTGUG00000008995	PRPF38A	100	84.211	Taeniopygia_guttata
ENSPPYG00000001348	PRPF38A	71	76.991	ENSTRUG00000003374	prpf38a	71	76.695	Takifugu_rubripes
ENSPPYG00000001348	PRPF38A	71	75.439	ENSTNIG00000005533	prpf38a	100	72.188	Tetraodon_nigroviridis
ENSPPYG00000001348	PRPF38A	100	90.852	ENSTBEG00000000725	PRPF38A	100	90.852	Tupaia_belangeri
ENSPPYG00000001348	PRPF38A	100	91.483	ENSTTRG00000016139	PRPF38A	100	91.483	Tursiops_truncatus
ENSPPYG00000001348	PRPF38A	100	91.483	ENSUAMG00000000625	PRPF38A	100	91.483	Ursus_americanus
ENSPPYG00000001348	PRPF38A	100	91.483	ENSUMAG00000022674	PRPF38A	100	91.483	Ursus_maritimus
ENSPPYG00000001348	PRPF38A	74	88.136	ENSVPAG00000000907	PRPF38A	100	85.804	Vicugna_pacos
ENSPPYG00000001348	PRPF38A	100	91.483	ENSVVUG00000004475	PRPF38A	100	91.483	Vulpes_vulpes
ENSPPYG00000001348	PRPF38A	100	76.415	ENSXETG00000008060	prpf38a	100	80.189	Xenopus_tropicalis
ENSPPYG00000001348	PRPF38A	71	77.193	ENSXCOG00000007393	prpf38a	77	76.891	Xiphophorus_couchianus
ENSPPYG00000001348	PRPF38A	71	79.204	ENSXMAG00000026143	prpf38a	100	74.528	Xiphophorus_maculatus