EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSPPYG00000001506 (Gene tree)
Gene ID
100444664
Gene Symbol
PABPC4
Alias
APP-1|iPABP
Full Name
poly(A) binding protein cytoplasmic 4
Gene Type
protein_coding
Species
Pongo_abelii
Status
putative
Strand
Plus strand
Length
15832 bases
Position
chr1:190544028-190559859
Accession
100444664
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSPPYP00000001741PABPPF00658.181.3e-3111
ENSPPYP00000001741RRM_5PF13893.64.6e-0911
ENSPPYP00000001741RRM_1PF00076.223.7e-9214
ENSPPYP00000001741RRM_1PF00076.223.7e-9224
ENSPPYP00000001741RRM_1PF00076.223.7e-9234
ENSPPYP00000001741RRM_1PF00076.223.7e-9244
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSPPYT00000001797PABPC4-2013030XM_002811001ENSPPYP00000001741660 (aa)XP_002811047H2N7W0
Gene Model
Click here to download ENSPPYG00000001506's gene model file
Pathways
Pathway IDPathway NameSource
pon03013RNA transportKEGG
pon03015mRNA surveillance pathwayKEGG
pon03018RNA degradationKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSPPYG00000001506's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSPPYG00000001506PABPC45630.921ENSPPYG00000001367ELAVL48630.921
ENSPPYG00000001506PABPC49863.902ENSPPYG00000011042PABPC1L9964.724
ENSPPYG00000001506PABPC49971.493ENSPPYG00000005219PABPC39971.321
ENSPPYG00000001506PABPC45331.507ENSPPYG00000002703TIAL17031.507
ENSPPYG00000001506PABPC45767.135ENSPPYG00000020526PABPC59666.942
ENSPPYG00000001506PABPC45432.911ENSPPYG00000012326TIA17230.263
ENSPPYG00000001506PABPC49975.075ENSPPYG00000018790PABPC19974.925
ENSPPYG00000001506PABPC45676.650ENSPPYG00000020468-9976.650
ENSPPYG00000001506PABPC45634.940ENSPPYG00000019166ELAVL28334.940
ENSPPYG00000001506PABPC46358.219ENSPPYG00000012833-9958.219
ENSPPYG00000001506PABPC45231.013ENSPPYG00000015814HNRNPA05031.788
ENSPPYG00000001506PABPC45537.500ENSPPYG00000002083CELF25637.500
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSPPYG00000001506PABPC4100100.000ENSG00000090621PABPC4100100.000Homo_sapiens
ENSPPYG00000001506PABPC49979.545ENSAPOG00000001161pabpc410080.120Acanthochromis_polyacanthus
ENSPPYG00000001506PABPC410098.939ENSAMEG00000011535-10098.939Ailuropoda_melanoleuca
ENSPPYG00000001506PABPC49854.992ENSAMEG00000015083-9954.685Ailuropoda_melanoleuca
ENSPPYG00000001506PABPC410080.269ENSACIG00000023343pabpc410080.867Amphilophus_citrinellus
ENSPPYG00000001506PABPC49979.697ENSAOCG00000021529pabpc410090.583Amphiprion_ocellaris
ENSPPYG00000001506PABPC49979.697ENSAPEG00000019196pabpc410079.970Amphiprion_percula
ENSPPYG00000001506PABPC49978.550ENSATEG00000007402pabpc410079.254Anabas_testudineus
ENSPPYG00000001506PABPC49987.405ENSAPLG00000009729-10087.405Anas_platyrhynchos
ENSPPYG00000001506PABPC49985.714ENSACAG00000002544PABPC410085.714Anolis_carolinensis
ENSPPYG00000001506PABPC410099.848ENSANAG00000025079PABPC410099.848Aotus_nancymaae
ENSPPYG00000001506PABPC410079.372ENSACLG00000019558pabpc410079.970Astatotilapia_calliptera
ENSPPYG00000001506PABPC49975.758ENSAMXG00000018779pabpc49976.364Astyanax_mexicanus
ENSPPYG00000001506PABPC410096.520ENSBTAG00000017125PABPC410096.520Bos_taurus
ENSPPYG00000001506PABPC45586.826ENSBTAG00000048536-9886.826Bos_taurus
ENSPPYG00000001506PABPC47883.883ENSCJAG00000045953-9283.824Callithrix_jacchus
ENSPPYG00000001506PABPC410099.697ENSCJAG00000002512-10099.697Callithrix_jacchus
ENSPPYG00000001506PABPC49998.993ENSCAFG00000003081PABPC410094.848Canis_familiaris
ENSPPYG00000001506PABPC410099.091ENSCAFG00020004161PABPC410099.091Canis_lupus_dingo
ENSPPYG00000001506PABPC410098.939ENSCHIG00000019398-10098.939Capra_hircus
ENSPPYG00000001506PABPC410076.515ENSCHIG00000023385-10076.515Capra_hircus
ENSPPYG00000001506PABPC410099.394ENSTSYG00000006532PABPC410099.394Carlito_syrichta
ENSPPYG00000001506PABPC49999.392ENSCAPG00000015984PABPC410099.392Cavia_aperea
ENSPPYG00000001506PABPC410099.394ENSCPOG00000009552PABPC410099.394Cavia_porcellus
ENSPPYG00000001506PABPC410099.848ENSCCAG00000037306PABPC410099.848Cebus_capucinus
ENSPPYG00000001506PABPC410099.848ENSCATG00000042164PABPC410099.848Cercocebus_atys
ENSPPYG00000001506PABPC410099.091ENSCLAG00000011899PABPC410099.091Chinchilla_lanigera
ENSPPYG00000001506PABPC410099.848ENSCSAG00000001135PABPC410099.848Chlorocebus_sabaeus
ENSPPYG00000001506PABPC48297.361ENSCHOG00000005327PABPC48197.361Choloepus_hoffmanni
ENSPPYG00000001506PABPC49987.709ENSCPBG00000001038PABPC410087.709Chrysemys_picta_bellii
ENSPPYG00000001506PABPC49999.693ENSCANG00000034177PABPC410099.693Colobus_angolensis_palliatus
ENSPPYG00000001506PABPC410097.289ENSCGRG00001018166Pabpc410097.289Cricetulus_griseus_chok1gshd
ENSPPYG00000001506PABPC49994.809ENSCGRG00000009777Pabpc410094.809Cricetulus_griseus_crigri
ENSPPYG00000001506PABPC410079.073ENSCSEG00000000130pabpc410079.522Cynoglossus_semilaevis
ENSPPYG00000001506PABPC49979.787ENSCVAG00000019246pabpc410080.699Cyprinodon_variegatus
ENSPPYG00000001506PABPC49981.487ENSDARG00000059259pabpc410081.319Danio_rerio
ENSPPYG00000001506PABPC49899.483ENSDNOG00000018444-9999.483Dasypus_novemcinctus
ENSPPYG00000001506PABPC410096.970ENSDORG00000011581Pabpc410096.970Dipodomys_ordii
ENSPPYG00000001506PABPC48662.214ENSETEG00000009172-9962.261Echinops_telfairi
ENSPPYG00000001506PABPC4100100.000ENSETEG00000018453-84100.000Echinops_telfairi
ENSPPYG00000001506PABPC49973.222ENSEBUG00000000992pabpc49980.346Eptatretus_burgeri
ENSPPYG00000001506PABPC49773.457ENSEBUG00000013782pabpc49972.466Eptatretus_burgeri
ENSPPYG00000001506PABPC410099.545ENSEASG00005014119PABPC410099.545Equus_asinus_asinus
ENSPPYG00000001506PABPC410099.545ENSECAG00000009396PABPC410099.545Equus_caballus
ENSPPYG00000001506PABPC410096.212ENSEEUG00000002962PABPC410096.212Erinaceus_europaeus
ENSPPYG00000001506PABPC49980.061ENSELUG00000003195pabpc49880.787Esox_lucius
ENSPPYG00000001506PABPC410099.242ENSFCAG00000015254-10099.242Felis_catus
ENSPPYG00000001506PABPC49986.950ENSFALG00000000543PABPC410086.950Ficedula_albicollis
ENSPPYG00000001506PABPC49067.284ENSFDAG00000010581-10063.361Fukomys_damarensis
ENSPPYG00000001506PABPC410099.394ENSFDAG00000020016-10099.394Fukomys_damarensis
ENSPPYG00000001506PABPC410079.641ENSFHEG00000007548pabpc49688.571Fundulus_heteroclitus
ENSPPYG00000001506PABPC49979.186ENSGMOG00000019025pabpc49979.789Gadus_morhua
ENSPPYG00000001506PABPC49987.709ENSGALG00000003800PABPC410087.709Gallus_gallus
ENSPPYG00000001506PABPC410079.730ENSGAFG00000018195pabpc49895.556Gambusia_affinis
ENSPPYG00000001506PABPC410077.877ENSGACG00000007179pabpc410078.689Gasterosteus_aculeatus
ENSPPYG00000001506PABPC49987.557ENSGAGG00000001888PABPC410087.557Gopherus_agassizii
ENSPPYG00000001506PABPC4100100.000ENSGGOG00000004002PABPC4100100.000Gorilla_gorilla
ENSPPYG00000001506PABPC410079.522ENSHBUG00000020206pabpc410080.120Haplochromis_burtoni
ENSPPYG00000001506PABPC410099.545ENSHGLG00000011162PABPC410099.545Heterocephalus_glaber_female
ENSPPYG00000001506PABPC410097.121ENSHGLG00100001580PABPC410097.121Heterocephalus_glaber_male
ENSPPYG00000001506PABPC410079.192ENSHCOG00000012694pabpc410079.641Hippocampus_comes
ENSPPYG00000001506PABPC49879.755ENSIPUG00000016620pabpc49980.330Ictalurus_punctatus
ENSPPYG00000001506PABPC410096.970ENSSTOG00000010416PABPC410096.970Ictidomys_tridecemlineatus
ENSPPYG00000001506PABPC410094.697ENSJJAG00000007781Pabpc410094.697Jaculus_jaculus
ENSPPYG00000001506PABPC49979.398ENSKMAG00000013597pabpc49979.669Kryptolebias_marmoratus
ENSPPYG00000001506PABPC410078.869ENSLBEG00000013654pabpc410079.583Labrus_bergylta
ENSPPYG00000001506PABPC49984.163ENSLACG00000011907PABPC410084.163Latimeria_chalumnae
ENSPPYG00000001506PABPC49981.928ENSLOCG00000001877pabpc49981.777Lepisosteus_oculatus
ENSPPYG00000001506PABPC410099.091ENSLAFG00000000151PABPC410099.091Loxodonta_africana
ENSPPYG00000001506PABPC410099.848ENSMFAG00000041481PABPC410099.848Macaca_fascicularis
ENSPPYG00000001506PABPC410099.848ENSMMUG00000007497PABPC410099.848Macaca_mulatta
ENSPPYG00000001506PABPC410099.697ENSMNEG00000043054PABPC410099.697Macaca_nemestrina
ENSPPYG00000001506PABPC410099.848ENSMLEG00000040716PABPC410099.848Mandrillus_leucophaeus
ENSPPYG00000001506PABPC49979.545ENSMAMG00000010025pabpc49980.000Mastacembelus_armatus
ENSPPYG00000001506PABPC410079.223ENSMZEG00005006141pabpc49290.583Maylandia_zebra
ENSPPYG00000001506PABPC49987.081ENSMGAG00000005408PABPC410087.081Meleagris_gallopavo
ENSPPYG00000001506PABPC473100.000ENSMAUG00000019763-8495.413Mesocricetus_auratus
ENSPPYG00000001506PABPC45581.287ENSMAUG00000004089-9281.287Mesocricetus_auratus
ENSPPYG00000001506PABPC46989.423ENSMAUG00000001295-9789.423Mesocricetus_auratus
ENSPPYG00000001506PABPC48995.262ENSMICG00000016633-9799.149Microcebus_murinus
ENSPPYG00000001506PABPC49973.311ENSMICG00000036729-10075.845Microcebus_murinus
ENSPPYG00000001506PABPC410097.741ENSMOCG00000006763Pabpc410097.741Microtus_ochrogaster
ENSPPYG00000001506PABPC410074.815ENSMMOG00000002363pabpc49975.852Mola_mola
ENSPPYG00000001506PABPC49889.198ENSMODG00000017657-10088.788Monodelphis_domestica
ENSPPYG00000001506PABPC45673.729ENSMODG00000018051-9173.729Monodelphis_domestica
ENSPPYG00000001506PABPC49979.154ENSMALG00000011017pabpc410079.285Monopterus_albus
ENSPPYG00000001506PABPC410097.424MGP_CAROLIEiJ_G0026435-10099.291Mus_caroli
ENSPPYG00000001506PABPC49983.729MGP_CAROLIEiJ_G0024864-10083.729Mus_caroli
ENSPPYG00000001506PABPC410097.879ENSMUSG00000011257Pabpc410099.405Mus_musculus
ENSPPYG00000001506PABPC49997.542MGP_PahariEiJ_G0028765Pabpc4100100.000Mus_pahari
ENSPPYG00000001506PABPC49978.603MGP_SPRETEiJ_G0027415Pabpc410099.291Mus_spretus
ENSPPYG00000001506PABPC410099.242ENSMPUG00000014414-10099.242Mustela_putorius_furo
ENSPPYG00000001506PABPC49551.185ENSMPUG00000006836-10051.027Mustela_putorius_furo
ENSPPYG00000001506PABPC410092.424ENSMLUG00000012068PABPC410092.424Myotis_lucifugus
ENSPPYG00000001506PABPC410096.818ENSNGAG00000018292Pabpc410096.818Nannospalax_galili
ENSPPYG00000001506PABPC45792.788ENSNBRG00000009708pabpc49892.788Neolamprologus_brichardi
ENSPPYG00000001506PABPC46486.441ENSNBRG00000010047-7586.441Neolamprologus_brichardi
ENSPPYG00000001506PABPC410097.424ENSNLEG00000011928PABPC410097.424Nomascus_leucogenys
ENSPPYG00000001506PABPC48298.737ENSOPRG00000011984PABPC48798.737Ochotona_princeps
ENSPPYG00000001506PABPC45085.714ENSODEG00000013457-10085.714Octodon_degus
ENSPPYG00000001506PABPC49989.322ENSODEG00000017434-10089.206Octodon_degus
ENSPPYG00000001506PABPC410098.485ENSODEG00000006592-10098.485Octodon_degus
ENSPPYG00000001506PABPC410079.522ENSONIG00000008176pabpc410079.821Oreochromis_niloticus
ENSPPYG00000001506PABPC49987.253ENSOANG00000010001PABPC410087.253Ornithorhynchus_anatinus
ENSPPYG00000001506PABPC49699.209ENSOCUG00000000562PABPC48899.209Oryctolagus_cuniculus
ENSPPYG00000001506PABPC49990.741ENSORLG00000017479pabpc49990.741Oryzias_latipes
ENSPPYG00000001506PABPC49990.741ENSORLG00020018644pabpc49990.741Oryzias_latipes_hni
ENSPPYG00000001506PABPC49990.741ENSORLG00015015042pabpc49990.741Oryzias_latipes_hsok
ENSPPYG00000001506PABPC49979.697ENSOMEG00000014410pabpc49983.266Oryzias_melastigma
ENSPPYG00000001506PABPC410096.833ENSOGAG00000004067PABPC410096.833Otolemur_garnettii
ENSPPYG00000001506PABPC410098.939ENSOARG00000020060PABPC410098.939Ovis_aries
ENSPPYG00000001506PABPC4100100.000ENSPPAG00000043625PABPC4100100.000Pan_paniscus
ENSPPYG00000001506PABPC410099.242ENSPPRG00000024727PABPC410099.242Panthera_pardus
ENSPPYG00000001506PABPC410099.242ENSPTIG00000005829PABPC410099.242Panthera_tigris_altaica
ENSPPYG00000001506PABPC4100100.000ENSPTRG00000000573PABPC4100100.000Pan_troglodytes
ENSPPYG00000001506PABPC410099.697ENSPANG00000009484PABPC410099.697Papio_anubis
ENSPPYG00000001506PABPC49981.089ENSPKIG00000025356pabpc49981.694Paramormyrops_kingsleyae
ENSPPYG00000001506PABPC49987.709ENSPSIG00000016892PABPC410087.709Pelodiscus_sinensis
ENSPPYG00000001506PABPC410072.305ENSPMGG00000009073pabpc49976.888Periophthalmus_magnuspinnatus
ENSPPYG00000001506PABPC410091.061ENSPEMG00000024193-9991.061Peromyscus_maniculatus_bairdii
ENSPPYG00000001506PABPC410097.273ENSPEMG00000023569-9997.273Peromyscus_maniculatus_bairdii
ENSPPYG00000001506PABPC49667.698ENSPMAG00000007885pabpc410066.854Petromyzon_marinus
ENSPPYG00000001506PABPC48970.132ENSPMAG00000002836pabpc410070.297Petromyzon_marinus
ENSPPYG00000001506PABPC49888.563ENSPCIG00000020674PABPC410093.571Phascolarctos_cinereus
ENSPPYG00000001506PABPC410079.042ENSPFOG00000002682pabpc410079.790Poecilia_formosa
ENSPPYG00000001506PABPC410078.892ENSPLAG00000010112pabpc410080.240Poecilia_latipinna
ENSPPYG00000001506PABPC49979.483ENSPMEG00000019739pabpc410079.940Poecilia_mexicana
ENSPPYG00000001506PABPC410083.220ENSPREG00000001589pabpc410083.220Poecilia_reticulata
ENSPPYG00000001506PABPC410094.242ENSPCAG00000003341PABPC410094.242Procavia_capensis
ENSPPYG00000001506PABPC49982.173ENSPCOG00000025882-9594.059Propithecus_coquereli
ENSPPYG00000001506PABPC410099.546ENSPCOG00000023725-10099.546Propithecus_coquereli
ENSPPYG00000001506PABPC49998.655ENSPVAG00000002187PABPC410098.655Pteropus_vampyrus
ENSPPYG00000001506PABPC410079.372ENSPNYG00000006134pabpc410079.970Pundamilia_nyererei
ENSPPYG00000001506PABPC410079.940ENSPNAG00000024355pabpc410080.090Pygocentrus_nattereri
ENSPPYG00000001506PABPC410095.606ENSRNOG00000015642Pabpc410095.606Rattus_norvegicus
ENSPPYG00000001506PABPC410093.485ENSRNOG00000028592AABR07035074.110093.485Rattus_norvegicus
ENSPPYG00000001506PABPC410099.848ENSRBIG00000039761PABPC410099.848Rhinopithecus_bieti
ENSPPYG00000001506PABPC410099.848ENSRROG00000033355PABPC410099.848Rhinopithecus_roxellana
ENSPPYG00000001506PABPC410099.697ENSSBOG00000026193PABPC410099.697Saimiri_boliviensis_boliviensis
ENSPPYG00000001506PABPC49888.408ENSSHAG00000018139PABPC410088.012Sarcophilus_harrisii
ENSPPYG00000001506PABPC49981.975ENSSFOG00015023514pabpc49981.875Scleropages_formosus
ENSPPYG00000001506PABPC49979.274ENSSMAG00000009007pabpc49980.030Scophthalmus_maximus
ENSPPYG00000001506PABPC49979.242ENSSDUG00000012683pabpc49588.046Seriola_dumerili
ENSPPYG00000001506PABPC49979.242ENSSLDG00000013025pabpc49785.588Seriola_lalandi_dorsalis
ENSPPYG00000001506PABPC410091.970ENSSARG00000000310PABPC410091.970Sorex_araneus
ENSPPYG00000001506PABPC49987.405ENSSPUG00000003204PABPC410087.253Sphenodon_punctatus
ENSPPYG00000001506PABPC49990.562ENSSPAG00000009252pabpc49979.136Stegastes_partitus
ENSPPYG00000001506PABPC48950.337ENSSSCG00000036170-9650.337Sus_scrofa
ENSPPYG00000001506PABPC410099.091ENSSSCG00000003660-10099.091Sus_scrofa
ENSPPYG00000001506PABPC49987.595ENSTGUG00000001266PABPC410087.595Taeniopygia_guttata
ENSPPYG00000001506PABPC410078.743ENSTRUG00000005907pabpc49979.279Takifugu_rubripes
ENSPPYG00000001506PABPC410075.716ENSTNIG00000016902pabpc49975.716Tetraodon_nigroviridis
ENSPPYG00000001506PABPC49988.571ENSTBEG00000009035PABPC410088.571Tupaia_belangeri
ENSPPYG00000001506PABPC49983.525ENSTTRG00000014340PABPC410087.059Tursiops_truncatus
ENSPPYG00000001506PABPC410098.939ENSUAMG00000000303PABPC410098.939Ursus_americanus
ENSPPYG00000001506PABPC410098.939ENSUMAG00000019585PABPC410099.057Ursus_maritimus
ENSPPYG00000001506PABPC48497.872ENSVPAG00000010041PABPC47797.872Vicugna_pacos
ENSPPYG00000001506PABPC410099.091ENSVVUG00000005215PABPC410099.091Vulpes_vulpes
ENSPPYG00000001506PABPC49979.666ENSXETG00000010946pabpc410079.666Xenopus_tropicalis
ENSPPYG00000001506PABPC45697.024ENSXETG00000027221-10097.024Xenopus_tropicalis
ENSPPYG00000001506PABPC49977.907ENSXCOG00000013190pabpc49689.623Xiphophorus_couchianus
ENSPPYG00000001506PABPC410079.192ENSXMAG00000019007pabpc410080.090Xiphophorus_maculatus

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