EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPPYG00000001539 (Gene tree)
Gene ID: 100435578
Gene Symbol: LSM10
Alias: MGC15749
Full Name: LSM10%2C U7 small nuclear RNA associated
Gene Type: protein_coding
Species: Pongo_abelii
Status: putative
Strand: Plus strand
Length: 372 bases
Position: chr1:193796672-193797043
Accession: 100435578
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPPYP00000001775	LSM	PF01423.22	6.6e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPPYT00000001832	LSM10-201	372	-	ENSPPYP00000001775	123 (aa)	XP_002811089	H2N7Z2

Gene Model

Click here to download ENSPPYG00000001539's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPPYG00000001539's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPPYG00000001539	LSM10	60	32.432	ENSPPYG00000025874	SNRPD1	84	30.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPPYG00000001539	LSM10	100	99.187	ENSG00000181817	LSM10	100	99.187	Homo_sapiens
ENSPPYG00000001539	LSM10	100	90.244	ENSAMEG00000019854	LSM10	100	90.244	Ailuropoda_melanoleuca
ENSPPYG00000001539	LSM10	95	66.667	ENSACIG00000015420	oscp1a	77	66.667	Amphilophus_citrinellus
ENSPPYG00000001539	LSM10	96	67.797	ENSAOCG00000014654	-	98	67.797	Amphiprion_ocellaris
ENSPPYG00000001539	LSM10	90	65.766	ENSAOCG00000015607	LSM10	86	65.766	Amphiprion_ocellaris
ENSPPYG00000001539	LSM10	96	67.797	ENSAOCG00000015618	LSM10	98	67.797	Amphiprion_ocellaris
ENSPPYG00000001539	LSM10	96	67.797	ENSAPEG00000021845	-	98	67.797	Amphiprion_percula
ENSPPYG00000001539	LSM10	90	65.766	ENSAPEG00000021851	LSM10	86	65.766	Amphiprion_percula
ENSPPYG00000001539	LSM10	99	60.656	ENSATEG00000006310	oscp1a	88	60.656	Anabas_testudineus
ENSPPYG00000001539	LSM10	100	67.480	ENSACAG00000001231	LSM10	100	67.480	Anolis_carolinensis
ENSPPYG00000001539	LSM10	99	96.721	ENSANAG00000031489	-	100	96.721	Aotus_nancymaae
ENSPPYG00000001539	LSM10	100	98.374	ENSANAG00000018759	-	100	98.374	Aotus_nancymaae
ENSPPYG00000001539	LSM10	96	66.102	ENSACLG00000004728	oscp1a	96	66.102	Astatotilapia_calliptera
ENSPPYG00000001539	LSM10	96	66.102	ENSAMXG00000025301	oscp1a	98	66.102	Astyanax_mexicanus
ENSPPYG00000001539	LSM10	99	90.984	ENSBTAG00000024096	LSM10	100	90.984	Bos_taurus
ENSPPYG00000001539	LSM10	100	97.561	ENSCJAG00000044880	LSM10	100	97.561	Callithrix_jacchus
ENSPPYG00000001539	LSM10	100	91.870	ENSCAFG00000003382	LSM10	100	91.870	Canis_familiaris
ENSPPYG00000001539	LSM10	100	91.870	ENSCAFG00020008920	LSM10	100	91.870	Canis_lupus_dingo
ENSPPYG00000001539	LSM10	99	90.984	ENSCHIG00000009398	LSM10	100	90.984	Capra_hircus
ENSPPYG00000001539	LSM10	100	91.870	ENSCAPG00000012567	LSM10	100	91.870	Cavia_aperea
ENSPPYG00000001539	LSM10	100	91.870	ENSCPOG00000039302	LSM10	100	91.870	Cavia_porcellus
ENSPPYG00000001539	LSM10	99	95.082	ENSCCAG00000008378	-	99	95.082	Cebus_capucinus
ENSPPYG00000001539	LSM10	100	98.374	ENSCCAG00000018913	-	100	98.374	Cebus_capucinus
ENSPPYG00000001539	LSM10	100	98.374	ENSCATG00000006589	LSM10	100	98.374	Cercocebus_atys
ENSPPYG00000001539	LSM10	100	93.496	ENSCLAG00000008633	LSM10	100	93.496	Chinchilla_lanigera
ENSPPYG00000001539	LSM10	100	98.374	ENSCSAG00000000134	LSM10	100	98.374	Chlorocebus_sabaeus
ENSPPYG00000001539	LSM10	100	94.400	ENSCHOG00000008615	LSM10	100	94.400	Choloepus_hoffmanni
ENSPPYG00000001539	LSM10	83	32.353	ENSCSAVG00000001896	-	87	32.353	Ciona_savignyi
ENSPPYG00000001539	LSM10	100	98.374	ENSCANG00000019928	LSM10	100	98.374	Colobus_angolensis_palliatus
ENSPPYG00000001539	LSM10	99	90.164	ENSCGRG00001004317	-	100	90.164	Cricetulus_griseus_chok1gshd
ENSPPYG00000001539	LSM10	93	81.897	ENSCGRG00001022673	-	93	81.897	Cricetulus_griseus_chok1gshd
ENSPPYG00000001539	LSM10	99	90.164	ENSCGRG00000014935	-	100	90.164	Cricetulus_griseus_crigri
ENSPPYG00000001539	LSM10	93	81.897	ENSCGRG00000015514	-	93	81.897	Cricetulus_griseus_crigri
ENSPPYG00000001539	LSM10	98	61.983	ENSCSEG00000010374	oscp1a	81	61.983	Cynoglossus_semilaevis
ENSPPYG00000001539	LSM10	98	64.167	ENSCVAG00000001536	oscp1a	91	64.167	Cyprinodon_variegatus
ENSPPYG00000001539	LSM10	69	69.412	ENSDARG00000109563	CABZ01074453.1	99	69.412	Danio_rerio
ENSPPYG00000001539	LSM10	98	70.000	ENSDARG00000101222	oscp1a	99	70.000	Danio_rerio
ENSPPYG00000001539	LSM10	98	95.041	ENSDNOG00000036662	LSM10	98	95.041	Dasypus_novemcinctus
ENSPPYG00000001539	LSM10	100	91.870	ENSDORG00000007579	Lsm10	100	91.870	Dipodomys_ordii
ENSPPYG00000001539	LSM10	85	31.193	FBgn0033554	Lsm10	77	31.193	Drosophila_melanogaster
ENSPPYG00000001539	LSM10	100	87.805	ENSETEG00000005703	LSM10	100	87.805	Echinops_telfairi
ENSPPYG00000001539	LSM10	95	52.991	ENSEBUG00000001312	oscp1a	96	52.991	Eptatretus_burgeri
ENSPPYG00000001539	LSM10	100	91.870	ENSEASG00005012194	LSM10	100	91.870	Equus_asinus_asinus
ENSPPYG00000001539	LSM10	100	92.683	ENSECAG00000005071	LSM10	100	92.683	Equus_caballus
ENSPPYG00000001539	LSM10	100	90.244	ENSEEUG00000012032	LSM10	100	90.244	Erinaceus_europaeus
ENSPPYG00000001539	LSM10	98	67.500	ENSELUG00000007452	oscp1a	98	67.500	Esox_lucius
ENSPPYG00000001539	LSM10	95	72.650	ENSFALG00000000851	LSM10	95	72.650	Ficedula_albicollis
ENSPPYG00000001539	LSM10	100	89.431	ENSFDAG00000021056	LSM10	100	89.431	Fukomys_damarensis
ENSPPYG00000001539	LSM10	89	66.364	ENSFHEG00000001058	oscp1a	95	66.364	Fundulus_heteroclitus
ENSPPYG00000001539	LSM10	87	64.486	ENSGMOG00000019832	oscp1a	90	64.486	Gadus_morhua
ENSPPYG00000001539	LSM10	100	72.358	ENSGALG00000002127	LSM10	100	72.358	Gallus_gallus
ENSPPYG00000001539	LSM10	89	60.550	ENSGAFG00000016445	oscp1a	85	60.550	Gambusia_affinis
ENSPPYG00000001539	LSM10	96	62.712	ENSGACG00000002329	oscp1a	97	62.712	Gasterosteus_aculeatus
ENSPPYG00000001539	LSM10	100	72.358	ENSGAGG00000024848	LSM10	100	72.358	Gopherus_agassizii
ENSPPYG00000001539	LSM10	100	99.187	ENSGGOG00000003556	LSM10	100	99.187	Gorilla_gorilla
ENSPPYG00000001539	LSM10	96	66.102	ENSHBUG00000001722	oscp1a	96	66.102	Haplochromis_burtoni
ENSPPYG00000001539	LSM10	100	92.683	ENSHGLG00000011625	LSM10	100	92.683	Heterocephalus_glaber_female
ENSPPYG00000001539	LSM10	100	92.683	ENSHGLG00100001769	LSM10	100	92.683	Heterocephalus_glaber_male
ENSPPYG00000001539	LSM10	85	66.667	ENSIPUG00000005808	oscp1a	91	66.667	Ictalurus_punctatus
ENSPPYG00000001539	LSM10	100	91.057	ENSSTOG00000000606	LSM10	100	91.057	Ictidomys_tridecemlineatus
ENSPPYG00000001539	LSM10	96	63.559	ENSKMAG00000012143	oscp1a	98	63.559	Kryptolebias_marmoratus
ENSPPYG00000001539	LSM10	98	62.500	ENSLBEG00000017764	oscp1a	98	62.500	Labrus_bergylta
ENSPPYG00000001539	LSM10	100	73.171	ENSLACG00000015904	LSM10	95	73.171	Latimeria_chalumnae
ENSPPYG00000001539	LSM10	98	70.833	ENSLOCG00000018277	oscp1a	98	70.833	Lepisosteus_oculatus
ENSPPYG00000001539	LSM10	100	91.870	ENSLAFG00000009600	LSM10	100	91.870	Loxodonta_africana
ENSPPYG00000001539	LSM10	100	98.374	ENSMFAG00000009115	LSM10	100	98.374	Macaca_fascicularis
ENSPPYG00000001539	LSM10	100	98.374	ENSMMUG00000017338	LSM10	100	98.374	Macaca_mulatta
ENSPPYG00000001539	LSM10	100	98.374	ENSMNEG00000020023	LSM10	100	98.374	Macaca_nemestrina
ENSPPYG00000001539	LSM10	100	98.374	ENSMLEG00000025150	LSM10	100	98.374	Mandrillus_leucophaeus
ENSPPYG00000001539	LSM10	98	64.463	ENSMAMG00000004427	oscp1a	99	64.463	Mastacembelus_armatus
ENSPPYG00000001539	LSM10	96	66.102	ENSMZEG00005026307	oscp1a	96	66.102	Maylandia_zebra
ENSPPYG00000001539	LSM10	100	71.545	ENSMGAG00000015707	LSM10	100	71.545	Meleagris_gallopavo
ENSPPYG00000001539	LSM10	98	91.667	ENSMAUG00000016624	Lsm10	98	91.667	Mesocricetus_auratus
ENSPPYG00000001539	LSM10	98	91.667	ENSMOCG00000021943	Lsm10	98	91.667	Microtus_ochrogaster
ENSPPYG00000001539	LSM10	90	66.667	ENSMMOG00000013597	oscp1a	83	66.667	Mola_mola
ENSPPYG00000001539	LSM10	100	81.301	ENSMODG00000023328	LSM10	100	81.301	Monodelphis_domestica
ENSPPYG00000001539	LSM10	58	57.895	ENSMALG00000012661	oscp1a	60	57.895	Monopterus_albus
ENSPPYG00000001539	LSM10	98	90.833	MGP_CAROLIEiJ_G0026467	Lsm10	100	89.247	Mus_caroli
ENSPPYG00000001539	LSM10	98	91.667	ENSMUSG00000050188	Lsm10	100	90.323	Mus_musculus
ENSPPYG00000001539	LSM10	98	91.667	MGP_PahariEiJ_G0028798	Lsm10	100	90.323	Mus_pahari
ENSPPYG00000001539	LSM10	98	91.667	MGP_SPRETEiJ_G0027446	Lsm10	100	90.323	Mus_spretus
ENSPPYG00000001539	LSM10	100	91.870	ENSMPUG00000018593	LSM10	100	91.870	Mustela_putorius_furo
ENSPPYG00000001539	LSM10	100	88.618	ENSMLUG00000023895	LSM10	100	88.618	Myotis_lucifugus
ENSPPYG00000001539	LSM10	100	91.870	ENSNGAG00000015011	Lsm10	100	91.870	Nannospalax_galili
ENSPPYG00000001539	LSM10	96	66.949	ENSNBRG00000014306	oscp1a	96	66.949	Neolamprologus_brichardi
ENSPPYG00000001539	LSM10	100	99.187	ENSNLEG00000033754	LSM10	100	99.187	Nomascus_leucogenys
ENSPPYG00000001539	LSM10	100	81.301	ENSMEUG00000006313	LSM10	100	81.301	Notamacropus_eugenii
ENSPPYG00000001539	LSM10	100	91.870	ENSOPRG00000001699	LSM10	100	91.870	Ochotona_princeps
ENSPPYG00000001539	LSM10	100	93.496	ENSODEG00000019161	LSM10	100	93.496	Octodon_degus
ENSPPYG00000001539	LSM10	96	66.949	ENSONIG00000020904	oscp1a	97	66.949	Oreochromis_niloticus
ENSPPYG00000001539	LSM10	100	73.984	ENSOANG00000002066	LSM10	100	73.984	Ornithorhynchus_anatinus
ENSPPYG00000001539	LSM10	100	91.057	ENSOCUG00000005333	LSM10	100	91.057	Oryctolagus_cuniculus
ENSPPYG00000001539	LSM10	96	65.254	ENSORLG00000009504	oscp1a	98	65.254	Oryzias_latipes
ENSPPYG00000001539	LSM10	96	65.254	ENSORLG00020016201	oscp1a	98	65.254	Oryzias_latipes_hni
ENSPPYG00000001539	LSM10	96	65.254	ENSORLG00015007794	oscp1a	97	65.254	Oryzias_latipes_hsok
ENSPPYG00000001539	LSM10	100	90.244	ENSOGAG00000002653	LSM10	100	90.244	Otolemur_garnettii
ENSPPYG00000001539	LSM10	99	90.984	ENSOARG00000009596	LSM10	100	90.984	Ovis_aries
ENSPPYG00000001539	LSM10	100	99.187	ENSPPAG00000023465	LSM10	100	99.187	Pan_paniscus
ENSPPYG00000001539	LSM10	100	92.683	ENSPPRG00000014619	LSM10	100	92.683	Panthera_pardus
ENSPPYG00000001539	LSM10	100	92.683	ENSPTIG00000004613	LSM10	100	92.683	Panthera_tigris_altaica
ENSPPYG00000001539	LSM10	100	99.187	ENSPTRG00000000539	LSM10	100	99.187	Pan_troglodytes
ENSPPYG00000001539	LSM10	100	98.374	ENSPANG00000023172	LSM10	100	98.374	Papio_anubis
ENSPPYG00000001539	LSM10	100	64.228	ENSPKIG00000003728	oscp1a	99	64.228	Paramormyrops_kingsleyae
ENSPPYG00000001539	LSM10	100	70.732	ENSPSIG00000000590	LSM10	100	70.732	Pelodiscus_sinensis
ENSPPYG00000001539	LSM10	62	63.158	ENSPMGG00000015718	oscp1a	99	63.158	Periophthalmus_magnuspinnatus
ENSPPYG00000001539	LSM10	84	85.437	ENSPCIG00000014865	LSM10	76	85.437	Phascolarctos_cinereus
ENSPPYG00000001539	LSM10	91	66.071	ENSPFOG00000020490	oscp1a	95	66.071	Poecilia_formosa
ENSPPYG00000001539	LSM10	96	64.407	ENSPLAG00000016537	oscp1a	89	64.407	Poecilia_latipinna
ENSPPYG00000001539	LSM10	93	65.789	ENSPMEG00000000174	oscp1a	98	65.789	Poecilia_mexicana
ENSPPYG00000001539	LSM10	96	64.407	ENSPREG00000009899	oscp1a	89	64.407	Poecilia_reticulata
ENSPPYG00000001539	LSM10	100	91.057	ENSPCAG00000002520	LSM10	100	91.057	Procavia_capensis
ENSPPYG00000001539	LSM10	100	91.057	ENSPVAG00000008644	LSM10	100	91.057	Pteropus_vampyrus
ENSPPYG00000001539	LSM10	96	66.102	ENSPNYG00000003138	oscp1a	96	66.102	Pundamilia_nyererei
ENSPPYG00000001539	LSM10	94	65.517	ENSPNAG00000028829	oscp1a	96	65.517	Pygocentrus_nattereri
ENSPPYG00000001539	LSM10	98	92.500	ENSRNOG00000025716	Lsm10	98	92.500	Rattus_norvegicus
ENSPPYG00000001539	LSM10	100	98.374	ENSRBIG00000001561	LSM10	100	98.374	Rhinopithecus_bieti
ENSPPYG00000001539	LSM10	100	98.374	ENSRROG00000011414	LSM10	100	98.374	Rhinopithecus_roxellana
ENSPPYG00000001539	LSM10	100	98.374	ENSSBOG00000036413	-	100	98.374	Saimiri_boliviensis_boliviensis
ENSPPYG00000001539	LSM10	100	80.488	ENSSHAG00000018056	LSM10	100	80.488	Sarcophilus_harrisii
ENSPPYG00000001539	LSM10	99	63.934	ENSSFOG00015019954	lsm10	100	63.934	Scleropages_formosus
ENSPPYG00000001539	LSM10	93	64.348	ENSSMAG00000001297	oscp1a	98	64.348	Scophthalmus_maximus
ENSPPYG00000001539	LSM10	98	63.115	ENSSDUG00000007090	oscp1a	99	63.115	Seriola_dumerili
ENSPPYG00000001539	LSM10	95	64.103	ENSSLDG00000000800	oscp1a	97	64.103	Seriola_lalandi_dorsalis
ENSPPYG00000001539	LSM10	100	88.800	ENSSARG00000004211	LSM10	100	90.400	Sorex_araneus
ENSPPYG00000001539	LSM10	94	65.517	ENSSPAG00000009229	oscp1a	96	65.517	Stegastes_partitus
ENSPPYG00000001539	LSM10	100	89.431	ENSSSCG00000038916	LSM10	100	89.431	Sus_scrofa
ENSPPYG00000001539	LSM10	96	72.881	ENSTGUG00000001602	-	97	72.881	Taeniopygia_guttata
ENSPPYG00000001539	LSM10	96	72.881	ENSTGUG00000001600	-	97	72.881	Taeniopygia_guttata
ENSPPYG00000001539	LSM10	96	66.102	ENSTRUG00000010531	oscp1a	95	66.102	Takifugu_rubripes
ENSPPYG00000001539	LSM10	100	94.309	ENSTBEG00000016674	LSM10	100	94.309	Tupaia_belangeri
ENSPPYG00000001539	LSM10	100	90.244	ENSUAMG00000020265	LSM10	100	90.244	Ursus_americanus
ENSPPYG00000001539	LSM10	100	90.244	ENSUMAG00000001438	LSM10	57	90.244	Ursus_maritimus
ENSPPYG00000001539	LSM10	100	91.870	ENSVVUG00000023209	LSM10	100	91.870	Vulpes_vulpes
ENSPPYG00000001539	LSM10	100	69.919	ENSXETG00000027631	lsm10	100	69.919	Xenopus_tropicalis
ENSPPYG00000001539	LSM10	97	61.345	ENSXCOG00000018776	oscp1a	75	61.345	Xiphophorus_couchianus
ENSPPYG00000001539	LSM10	93	63.158	ENSXMAG00000019963	oscp1a	88	63.158	Xiphophorus_maculatus