EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPPYG00000001621 (Gene tree)
Gene ID: 100174674
Gene Symbol: PUM1
Alias: KIAA0099|PUMH1
Full Name: pumilio RNA binding family member 1
Gene Type: protein_coding
Species: Pongo_abelii
Status: putative
Strand: Plus strand
Length: 142714 bases
Position: chr1:199223557-199366270
Accession: 14957
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPPYP00000001871	PUF	PF00806.19	3.8e-70	1	8
ENSPPYP00000001871	PUF	PF00806.19	3.8e-70	2	8
ENSPPYP00000001871	PUF	PF00806.19	3.8e-70	3	8
ENSPPYP00000001871	PUF	PF00806.19	3.8e-70	4	8
ENSPPYP00000001871	PUF	PF00806.19	3.8e-70	5	8
ENSPPYP00000001871	PUF	PF00806.19	3.8e-70	6	8
ENSPPYP00000001871	PUF	PF00806.19	3.8e-70	7	8
ENSPPYP00000001871	PUF	PF00806.19	3.8e-70	8	8

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPPYT00000001930	PUM1-201	5620	-	ENSPPYP00000001871	1212 (aa)	-	H2N884

Gene Model

Click here to download ENSPPYG00000001621's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPPYG00000001621's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPPYG00000001621	PUM1	90	75.364	ENSPPYG00000012617	PUM2	100	75.545

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPPYG00000001621	PUM1	100	98.020	ENSG00000134644	PUM1	100	100.000	Homo_sapiens
ENSPPYG00000001621	PUM1	90	91.566	ENSAPOG00000021632	pum1	100	77.606	Acanthochromis_polyacanthus
ENSPPYG00000001621	PUM1	100	97.364	ENSAMEG00000017656	PUM1	97	97.364	Ailuropoda_melanoleuca
ENSPPYG00000001621	PUM1	100	73.268	ENSACIG00000021013	pum1	100	75.081	Amphilophus_citrinellus
ENSPPYG00000001621	PUM1	90	88.506	ENSAOCG00000003944	pum1	100	77.606	Amphiprion_ocellaris
ENSPPYG00000001621	PUM1	90	88.506	ENSAPEG00000014550	pum1	100	77.606	Amphiprion_percula
ENSPPYG00000001621	PUM1	90	88.506	ENSATEG00000016004	pum1	100	91.084	Anabas_testudineus
ENSPPYG00000001621	PUM1	100	95.713	ENSAPLG00000009351	PUM1	100	95.713	Anas_platyrhynchos
ENSPPYG00000001621	PUM1	100	93.894	ENSACAG00000000682	PUM1	98	93.894	Anolis_carolinensis
ENSPPYG00000001621	PUM1	100	97.527	ENSANAG00000027865	PUM1	100	100.000	Aotus_nancymaae
ENSPPYG00000001621	PUM1	90	75.068	ENSACLG00000019354	pum1	100	77.285	Astatotilapia_calliptera
ENSPPYG00000001621	PUM1	100	77.213	ENSAMXG00000020607	pum1	96	77.623	Astyanax_mexicanus
ENSPPYG00000001621	PUM1	100	97.442	ENSBTAG00000018979	PUM1	100	100.000	Bos_taurus
ENSPPYG00000001621	PUM1	100	97.692	ENSCJAG00000006035	PUM1	100	100.000	Callithrix_jacchus
ENSPPYG00000001621	PUM1	100	95.218	ENSCAFG00000011205	PUM1	100	95.218	Canis_familiaris
ENSPPYG00000001621	PUM1	92	95.191	ENSCAFG00020024616	PUM1	98	99.275	Canis_lupus_dingo
ENSPPYG00000001621	PUM1	100	97.442	ENSCHIG00000012952	PUM1	100	99.275	Capra_hircus
ENSPPYG00000001621	PUM1	100	97.609	ENSTSYG00000008868	PUM1	100	99.377	Carlito_syrichta
ENSPPYG00000001621	PUM1	100	97.279	ENSCPOG00000031613	PUM1	100	99.306	Cavia_porcellus
ENSPPYG00000001621	PUM1	100	95.792	ENSCATG00000017991	PUM1	100	100.000	Cercocebus_atys
ENSPPYG00000001621	PUM1	100	97.362	ENSCLAG00000007662	PUM1	100	99.306	Chinchilla_lanigera
ENSPPYG00000001621	PUM1	100	97.059	ENSCSAG00000001028	PUM1	100	97.059	Chlorocebus_sabaeus
ENSPPYG00000001621	PUM1	93	93.324	ENSCHOG00000010245	PUM1	93	93.324	Choloepus_hoffmanni
ENSPPYG00000001621	PUM1	100	95.792	ENSCPBG00000009288	PUM1	100	98.068	Chrysemys_picta_bellii
ENSPPYG00000001621	PUM1	100	98.020	ENSCANG00000042606	PUM1	100	100.000	Colobus_angolensis_palliatus
ENSPPYG00000001621	PUM1	100	96.865	ENSCGRG00001024949	Pum1	100	99.306	Cricetulus_griseus_chok1gshd
ENSPPYG00000001621	PUM1	100	96.865	ENSCGRG00000014197	Pum1	100	99.306	Cricetulus_griseus_crigri
ENSPPYG00000001621	PUM1	90	74.366	ENSCSEG00000015981	pum1	100	76.018	Cynoglossus_semilaevis
ENSPPYG00000001621	PUM1	100	72.484	ENSCVAG00000007043	pum1	100	74.230	Cyprinodon_variegatus
ENSPPYG00000001621	PUM1	100	77.787	ENSDARG00000099256	pum1	100	78.033	Danio_rerio
ENSPPYG00000001621	PUM1	100	97.197	ENSDNOG00000010939	PUM1	100	97.197	Dasypus_novemcinctus
ENSPPYG00000001621	PUM1	85	99.034	ENSDORG00000001875	Pum1	100	99.034	Dipodomys_ordii
ENSPPYG00000001621	PUM1	88	91.794	ENSETEG00000004355	PUM1	87	91.794	Echinops_telfairi
ENSPPYG00000001621	PUM1	100	97.277	ENSEASG00005010813	PUM1	100	97.277	Equus_asinus_asinus
ENSPPYG00000001621	PUM1	100	97.115	ENSECAG00000021369	PUM1	100	97.115	Equus_caballus
ENSPPYG00000001621	PUM1	75	100.000	ENSEEUG00000003871	PUM1	74	100.000	Erinaceus_europaeus
ENSPPYG00000001621	PUM1	100	74.818	ENSELUG00000002409	pum1	100	83.540	Esox_lucius
ENSPPYG00000001621	PUM1	100	97.609	ENSFCAG00000010374	PUM1	100	100.000	Felis_catus
ENSPPYG00000001621	PUM1	100	93.186	ENSFALG00000001214	PUM1	97	93.186	Ficedula_albicollis
ENSPPYG00000001621	PUM1	100	97.279	ENSFDAG00000011319	PUM1	100	99.306	Fukomys_damarensis
ENSPPYG00000001621	PUM1	100	95.878	ENSGALG00000042598	PUM1	99	98.785	Gallus_gallus
ENSPPYG00000001621	PUM1	90	87.816	ENSGAFG00000015617	pum1	100	90.361	Gambusia_affinis
ENSPPYG00000001621	PUM1	100	73.382	ENSGACG00000005717	pum1	100	74.960	Gasterosteus_aculeatus
ENSPPYG00000001621	PUM1	100	95.466	ENSGAGG00000001290	PUM1	99	98.583	Gopherus_agassizii
ENSPPYG00000001621	PUM1	100	98.020	ENSGGOG00000011983	PUM1	100	100.000	Gorilla_gorilla
ENSPPYG00000001621	PUM1	100	72.971	ENSHBUG00000018718	pum1	100	74.878	Haplochromis_burtoni
ENSPPYG00000001621	PUM1	100	97.115	ENSHGLG00000013819	Pum1	100	98.630	Heterocephalus_glaber_female
ENSPPYG00000001621	PUM1	100	97.115	ENSHGLG00100008621	Pum1	100	98.630	Heterocephalus_glaber_male
ENSPPYG00000001621	PUM1	100	75.693	ENSIPUG00000020421	pum1	100	76.528	Ictalurus_punctatus
ENSPPYG00000001621	PUM1	100	97.607	ENSSTOG00000010757	PUM1	100	100.000	Ictidomys_tridecemlineatus
ENSPPYG00000001621	PUM1	100	97.195	ENSJJAG00000000530	Pum1	100	100.000	Jaculus_jaculus
ENSPPYG00000001621	PUM1	100	72.646	ENSKMAG00000003481	pum1	100	74.473	Kryptolebias_marmoratus
ENSPPYG00000001621	PUM1	100	72.358	ENSLBEG00000002527	pum1	100	74.432	Labrus_bergylta
ENSPPYG00000001621	PUM1	100	84.816	ENSLACG00000017188	PUM1	99	84.980	Latimeria_chalumnae
ENSPPYG00000001621	PUM1	100	86.579	ENSLOCG00000005210	pum1	99	86.661	Lepisosteus_oculatus
ENSPPYG00000001621	PUM1	100	96.950	ENSLAFG00000003178	PUM1	100	96.950	Loxodonta_africana
ENSPPYG00000001621	PUM1	100	97.617	ENSMFAG00000010291	PUM1	100	100.000	Macaca_fascicularis
ENSPPYG00000001621	PUM1	100	97.617	ENSMMUG00000013520	PUM1	100	100.000	Macaca_mulatta
ENSPPYG00000001621	PUM1	100	98.020	ENSMNEG00000034639	PUM1	100	100.000	Macaca_nemestrina
ENSPPYG00000001621	PUM1	100	98.020	ENSMLEG00000038743	PUM1	100	100.000	Mandrillus_leucophaeus
ENSPPYG00000001621	PUM1	100	73.052	ENSMAMG00000011606	pum1	100	74.959	Mastacembelus_armatus
ENSPPYG00000001621	PUM1	100	72.971	ENSMZEG00005005834	pum1	100	74.878	Maylandia_zebra
ENSPPYG00000001621	PUM1	100	95.631	ENSMGAG00000000724	PUM1	100	95.631	Meleagris_gallopavo
ENSPPYG00000001621	PUM1	100	97.032	ENSMAUG00000022090	Pum1	100	99.306	Mesocricetus_auratus
ENSPPYG00000001621	PUM1	99	95.458	ENSMICG00000012213	-	100	95.894	Microcebus_murinus
ENSPPYG00000001621	PUM1	100	97.609	ENSMICG00000007713	-	100	99.306	Microcebus_murinus
ENSPPYG00000001621	PUM1	100	96.950	ENSMOCG00000015463	Pum1	100	98.611	Microtus_ochrogaster
ENSPPYG00000001621	PUM1	90	88.276	ENSMMOG00000019817	pum1	100	90.843	Mola_mola
ENSPPYG00000001621	PUM1	100	95.964	ENSMODG00000017067	PUM1	100	95.964	Monodelphis_domestica
ENSPPYG00000001621	PUM1	90	88.506	ENSMALG00000016399	pum1	100	91.084	Monopterus_albus
ENSPPYG00000001621	PUM1	100	96.782	MGP_CAROLIEiJ_G0026549	Pum1	100	98.611	Mus_caroli
ENSPPYG00000001621	PUM1	100	97.030	ENSMUSG00000028580	Pum1	100	99.306	Mus_musculus
ENSPPYG00000001621	PUM1	100	96.865	MGP_PahariEiJ_G0028881	Pum1	100	99.306	Mus_pahari
ENSPPYG00000001621	PUM1	100	96.947	MGP_SPRETEiJ_G0027529	Pum1	100	99.306	Mus_spretus
ENSPPYG00000001621	PUM1	100	97.360	ENSMPUG00000015454	PUM1	100	97.360	Mustela_putorius_furo
ENSPPYG00000001621	PUM1	100	97.197	ENSMLUG00000006490	PUM1	100	97.197	Myotis_lucifugus
ENSPPYG00000001621	PUM1	100	97.360	ENSNGAG00000002378	Pum1	100	99.128	Nannospalax_galili
ENSPPYG00000001621	PUM1	78	81.312	ENSNBRG00000010689	pum1	100	83.457	Neolamprologus_brichardi
ENSPPYG00000001621	PUM1	100	96.617	ENSNLEG00000001151	PUM1	100	99.306	Nomascus_leucogenys
ENSPPYG00000001621	PUM1	75	100.000	ENSMEUG00000000976	-	75	97.297	Notamacropus_eugenii
ENSPPYG00000001621	PUM1	84	100.000	ENSOPRG00000001776	PUM1	73	100.000	Ochotona_princeps
ENSPPYG00000001621	PUM1	100	97.277	ENSODEG00000003465	PUM1	100	98.755	Octodon_degus
ENSPPYG00000001621	PUM1	100	73.553	ENSONIG00000002290	pum1	100	75.203	Oreochromis_niloticus
ENSPPYG00000001621	PUM1	82	75.800	ENSOANG00000004902	-	100	75.600	Ornithorhynchus_anatinus
ENSPPYG00000001621	PUM1	100	96.867	ENSOCUG00000008641	PUM1	99	96.867	Oryctolagus_cuniculus
ENSPPYG00000001621	PUM1	100	73.463	ENSORLG00000011482	pum1	100	74.637	Oryzias_latipes
ENSPPYG00000001621	PUM1	100	73.544	ENSORLG00020019461	pum1	100	74.637	Oryzias_latipes_hni
ENSPPYG00000001621	PUM1	100	73.544	ENSORLG00015011375	pum1	100	74.717	Oryzias_latipes_hsok
ENSPPYG00000001621	PUM1	90	89.655	ENSOMEG00000009312	pum1	54	77.027	Oryzias_melastigma
ENSPPYG00000001621	PUM1	100	94.979	ENSOGAG00000011063	PUM1	100	94.979	Otolemur_garnettii
ENSPPYG00000001621	PUM1	100	96.620	ENSOARG00000001899	PUM1	100	99.275	Ovis_aries
ENSPPYG00000001621	PUM1	100	98.020	ENSPPAG00000044003	PUM1	100	100.000	Pan_paniscus
ENSPPYG00000001621	PUM1	100	97.690	ENSPPRG00000001370	PUM1	100	100.000	Panthera_pardus
ENSPPYG00000001621	PUM1	100	97.525	ENSPTIG00000010798	PUM1	100	100.000	Panthera_tigris_altaica
ENSPPYG00000001621	PUM1	100	98.020	ENSPTRG00000000453	PUM1	100	100.000	Pan_troglodytes
ENSPPYG00000001621	PUM1	100	98.020	ENSPANG00000016338	PUM1	100	100.000	Papio_anubis
ENSPPYG00000001621	PUM1	96	93.478	ENSPKIG00000010578	pum1	100	82.696	Paramormyrops_kingsleyae
ENSPPYG00000001621	PUM1	100	96.040	ENSPSIG00000014118	PUM1	100	96.040	Pelodiscus_sinensis
ENSPPYG00000001621	PUM1	78	79.657	ENSPMGG00000005836	pum1	100	81.907	Periophthalmus_magnuspinnatus
ENSPPYG00000001621	PUM1	100	97.115	ENSPEMG00000010009	Pum1	100	99.306	Peromyscus_maniculatus_bairdii
ENSPPYG00000001621	PUM1	100	96.046	ENSPCIG00000014151	PUM1	100	98.257	Phascolarctos_cinereus
ENSPPYG00000001621	PUM1	95	75.729	ENSPFOG00000007289	pum1	99	82.416	Poecilia_formosa
ENSPPYG00000001621	PUM1	100	71.981	ENSPLAG00000007256	pum1	100	76.239	Poecilia_latipinna
ENSPPYG00000001621	PUM1	90	75.744	ENSPMEG00000019543	pum1	99	76.688	Poecilia_mexicana
ENSPPYG00000001621	PUM1	100	73.052	ENSPREG00000005195	pum1	100	80.970	Poecilia_reticulata
ENSPPYG00000001621	PUM1	77	99.383	ENSPCAG00000001979	PUM1	74	99.383	Procavia_capensis
ENSPPYG00000001621	PUM1	100	97.609	ENSPCOG00000004398	PUM1	100	99.306	Propithecus_coquereli
ENSPPYG00000001621	PUM1	100	95.545	ENSPVAG00000005207	PUM1	97	95.545	Pteropus_vampyrus
ENSPPYG00000001621	PUM1	100	73.052	ENSPNYG00000009518	pum1	100	81.446	Pundamilia_nyererei
ENSPPYG00000001621	PUM1	100	77.623	ENSPNAG00000026728	pum1	100	78.615	Pygocentrus_nattereri
ENSPPYG00000001621	PUM1	100	96.865	ENSRNOG00000011709	Pum1	100	96.865	Rattus_norvegicus
ENSPPYG00000001621	PUM1	100	98.020	ENSRBIG00000042521	PUM1	100	100.000	Rhinopithecus_bieti
ENSPPYG00000001621	PUM1	100	98.020	ENSRROG00000020156	PUM1	100	100.000	Rhinopithecus_roxellana
ENSPPYG00000001621	PUM1	100	97.774	ENSSBOG00000032037	PUM1	100	100.000	Saimiri_boliviensis_boliviensis
ENSPPYG00000001621	PUM1	100	95.881	ENSSHAG00000010918	PUM1	100	95.881	Sarcophilus_harrisii
ENSPPYG00000001621	PUM1	90	88.506	ENSSMAG00000010918	pum1	100	91.084	Scophthalmus_maximus
ENSPPYG00000001621	PUM1	100	73.052	ENSSDUG00000009021	pum1	100	75.203	Seriola_dumerili
ENSPPYG00000001621	PUM1	96	74.265	ENSSLDG00000009667	pum1	100	76.845	Seriola_lalandi_dorsalis
ENSPPYG00000001621	PUM1	94	100.000	ENSSARG00000003055	PUM1	91	100.000	Sorex_araneus
ENSPPYG00000001621	PUM1	100	95.380	ENSSPUG00000006267	PUM1	100	95.380	Sphenodon_punctatus
ENSPPYG00000001621	PUM1	90	88.506	ENSSPAG00000016636	pum1	100	77.606	Stegastes_partitus
ENSPPYG00000001621	PUM1	100	99.190	ENSSSCG00000003591	PUM1	100	100.000	Sus_scrofa
ENSPPYG00000001621	PUM1	100	72.949	ENSTRUG00000013121	pum1	100	83.333	Takifugu_rubripes
ENSPPYG00000001621	PUM1	100	73.268	ENSTNIG00000016983	pum1	99	75.346	Tetraodon_nigroviridis
ENSPPYG00000001621	PUM1	87	96.341	ENSTBEG00000013810	PUM1	89	96.341	Tupaia_belangeri
ENSPPYG00000001621	PUM1	92	97.321	ENSTTRG00000007436	PUM1	90	97.321	Tursiops_truncatus
ENSPPYG00000001621	PUM1	99	96.931	ENSUAMG00000018262	-	100	96.931	Ursus_americanus
ENSPPYG00000001621	PUM1	95	99.758	ENSUMAG00000009211	PUM1	100	99.758	Ursus_maritimus
ENSPPYG00000001621	PUM1	91	99.661	ENSVPAG00000005902	PUM1	92	99.661	Vicugna_pacos
ENSPPYG00000001621	PUM1	100	97.444	ENSVVUG00000014631	PUM1	100	99.758	Vulpes_vulpes
ENSPPYG00000001621	PUM1	100	85.926	ENSXETG00000012904	pum1	99	85.926	Xenopus_tropicalis
ENSPPYG00000001621	PUM1	100	72.321	ENSXMAG00000002945	pum1	100	76.138	Xiphophorus_maculatus