EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSPPYG00000002089 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Pongo_abelii
Status: putative
Strand: Minus strand
Length: 85594 bases
Position: chr10:12476227-12561820
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPPYP00000002423	Upf2	PF04050.14	2.4e-33	1	1
ENSPPYP00000002423	MIF4G	PF02854.19	2.9e-72	1	2
ENSPPYP00000002423	MIF4G	PF02854.19	2.9e-72	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPPYT00000002497	-	3783	-	ENSPPYP00000002423	836 (aa)	-	H2N9R9

Gene Model

Click here to download ENSPPYG00000002089's gene model file

Pathways

Pathway ID	Pathway Name	Source
pon03013	RNA transport	KEGG
pon03015	mRNA surveillance pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPPYG00000002089's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPPYG00000002089	-	100	99.761	ENSG00000151461	UPF2	66	99.761	Homo_sapiens
ENSPPYG00000002089	-	99	78.759	ENSAPOG00000015837	UPF2	64	78.520	Acanthochromis_polyacanthus
ENSPPYG00000002089	-	100	98.923	ENSAMEG00000004586	UPF2	66	98.923	Ailuropoda_melanoleuca
ENSPPYG00000002089	-	99	85.137	ENSACIG00000018078	UPF2	66	84.899	Amphilophus_citrinellus
ENSPPYG00000002089	-	100	85.172	ENSAOCG00000016766	UPF2	66	85.172	Amphiprion_ocellaris
ENSPPYG00000002089	-	100	85.172	ENSAPEG00000019084	UPF2	66	85.172	Amphiprion_percula
ENSPPYG00000002089	-	100	84.770	ENSATEG00000021677	UPF2	65	84.734	Anabas_testudineus
ENSPPYG00000002089	-	100	90.191	ENSAPLG00000010287	UPF2	65	89.474	Anas_platyrhynchos
ENSPPYG00000002089	-	100	94.258	ENSACAG00000009259	UPF2	66	94.258	Anolis_carolinensis
ENSPPYG00000002089	-	92	95.839	ENSANAG00000028451	UPF2	63	95.839	Aotus_nancymaae
ENSPPYG00000002089	-	100	85.172	ENSACLG00000012696	UPF2	66	84.935	Astatotilapia_calliptera
ENSPPYG00000002089	-	99	85.340	ENSAMXG00000013700	UPF2	65	85.936	Astyanax_mexicanus
ENSPPYG00000002089	-	100	99.043	ENSBTAG00000000288	UPF2	66	99.043	Bos_taurus
ENSPPYG00000002089	-	100	99.522	ENSCJAG00000020685	UPF2	66	99.522	Callithrix_jacchus
ENSPPYG00000002089	-	100	98.923	ENSCAFG00000004839	UPF2	66	98.923	Canis_familiaris
ENSPPYG00000002089	-	99	95.204	ENSCAFG00020005882	UPF2	65	95.204	Canis_lupus_dingo
ENSPPYG00000002089	-	100	99.043	ENSCHIG00000020359	UPF2	66	99.043	Capra_hircus
ENSPPYG00000002089	-	100	98.923	ENSTSYG00000000935	UPF2	66	98.923	Carlito_syrichta
ENSPPYG00000002089	-	99	82.974	ENSCAPG00000016658	UPF2	66	82.374	Cavia_aperea
ENSPPYG00000002089	-	99	95.564	ENSCPOG00000008809	UPF2	66	95.564	Cavia_porcellus
ENSPPYG00000002089	-	100	91.507	ENSCCAG00000035991	UPF2	64	91.507	Cebus_capucinus
ENSPPYG00000002089	-	100	99.880	ENSCATG00000032679	UPF2	66	99.880	Cercocebus_atys
ENSPPYG00000002089	-	100	98.445	ENSCLAG00000011434	UPF2	66	98.445	Chinchilla_lanigera
ENSPPYG00000002089	-	100	99.880	ENSCSAG00000013372	UPF2	66	99.880	Chlorocebus_sabaeus
ENSPPYG00000002089	-	84	99.554	ENSCHOG00000000422	UPF2	58	99.554	Choloepus_hoffmanni
ENSPPYG00000002089	-	99	95.084	ENSCPBG00000027823	UPF2	66	95.084	Chrysemys_picta_bellii
ENSPPYG00000002089	-	96	50.000	ENSCSAVG00000007772	-	80	48.892	Ciona_savignyi
ENSPPYG00000002089	-	99	90.166	ENSCANG00000040396	UPF2	65	91.138	Colobus_angolensis_palliatus
ENSPPYG00000002089	-	100	98.565	ENSCGRG00001019347	Upf2	66	98.565	Cricetulus_griseus_chok1gshd
ENSPPYG00000002089	-	100	98.565	ENSCGRG00000017993	Upf2	66	98.565	Cricetulus_griseus_crigri
ENSPPYG00000002089	-	100	78.529	ENSCSEG00000003520	UPF2	65	78.401	Cynoglossus_semilaevis
ENSPPYG00000002089	-	100	84.834	ENSCVAG00000006167	UPF2	93	85.240	Cyprinodon_variegatus
ENSPPYG00000002089	-	54	79.565	ENSDARG00000111388	CABZ01068469.1	88	80.974	Danio_rerio
ENSPPYG00000002089	-	100	98.923	ENSDNOG00000018160	UPF2	66	98.923	Dasypus_novemcinctus
ENSPPYG00000002089	-	100	98.086	ENSDORG00000002478	Upf2	66	98.086	Dipodomys_ordii
ENSPPYG00000002089	-	97	35.169	FBgn0029992	Upf2	55	43.860	Drosophila_melanogaster
ENSPPYG00000002089	-	66	72.159	ENSEBUG00000012448	-	52	72.483	Eptatretus_burgeri
ENSPPYG00000002089	-	100	99.402	ENSEASG00005019274	UPF2	66	99.402	Equus_asinus_asinus
ENSPPYG00000002089	-	100	99.402	ENSECAG00000017022	UPF2	66	99.402	Equus_caballus
ENSPPYG00000002089	-	99	83.929	ENSELUG00000012014	UPF2	66	84.416	Esox_lucius
ENSPPYG00000002089	-	100	99.448	ENSFCAG00000005785	UPF2	66	99.163	Felis_catus
ENSPPYG00000002089	-	100	95.215	ENSFALG00000001889	UPF2	64	95.215	Ficedula_albicollis
ENSPPYG00000002089	-	100	98.445	ENSFDAG00000014348	UPF2	66	98.445	Fukomys_damarensis
ENSPPYG00000002089	-	100	85.172	ENSFHEG00000009826	UPF2	66	84.460	Fundulus_heteroclitus
ENSPPYG00000002089	-	99	83.433	ENSGMOG00000005557	UPF2	65	83.254	Gadus_morhua
ENSPPYG00000002089	-	100	94.863	ENSGALG00000033772	UPF2	66	94.863	Gallus_gallus
ENSPPYG00000002089	-	100	84.935	ENSGAFG00000020867	UPF2	66	84.460	Gambusia_affinis
ENSPPYG00000002089	-	99	83.986	ENSGACG00000001080	UPF2	66	84.661	Gasterosteus_aculeatus
ENSPPYG00000002089	-	100	94.258	ENSGAGG00000002700	UPF2	66	94.258	Gopherus_agassizii
ENSPPYG00000002089	-	100	99.761	ENSGGOG00000001479	UPF2	66	99.761	Gorilla_gorilla
ENSPPYG00000002089	-	100	84.935	ENSHBUG00000004249	UPF2	66	84.899	Haplochromis_burtoni
ENSPPYG00000002089	-	100	98.565	ENSHGLG00000015176	-	66	98.565	Heterocephalus_glaber_female
ENSPPYG00000002089	-	99	88.144	ENSHGLG00000003822	-	66	87.665	Heterocephalus_glaber_female
ENSPPYG00000002089	-	99	98.321	ENSHGLG00100010036	UPF2	67	98.321	Heterocephalus_glaber_male
ENSPPYG00000002089	-	100	83.867	ENSHCOG00000004025	UPF2	65	83.867	Hippocampus_comes
ENSPPYG00000002089	-	100	84.223	ENSIPUG00000015524	UPF2	66	84.679	Ictalurus_punctatus
ENSPPYG00000002089	-	100	98.684	ENSSTOG00000013075	UPF2	66	98.684	Ictidomys_tridecemlineatus
ENSPPYG00000002089	-	100	97.608	ENSJJAG00000004913	Upf2	66	97.608	Jaculus_jaculus
ENSPPYG00000002089	-	100	84.198	ENSKMAG00000001071	UPF2	66	84.142	Kryptolebias_marmoratus
ENSPPYG00000002089	-	100	84.888	ENSLBEG00000016394	-	65	84.970	Labrus_bergylta
ENSPPYG00000002089	-	69	84.775	ENSLBEG00000000728	-	52	84.775	Labrus_bergylta
ENSPPYG00000002089	-	99	78.199	ENSLACG00000015945	UPF2	66	78.081	Latimeria_chalumnae
ENSPPYG00000002089	-	100	88.612	ENSLOCG00000015698	UPF2	66	88.493	Lepisosteus_oculatus
ENSPPYG00000002089	-	100	99.880	ENSMFAG00000043865	UPF2	66	99.880	Macaca_fascicularis
ENSPPYG00000002089	-	100	99.880	ENSMMUG00000008241	UPF2	66	99.880	Macaca_mulatta
ENSPPYG00000002089	-	70	99.321	ENSMNEG00000008062	UPF2	57	99.321	Macaca_nemestrina
ENSPPYG00000002089	-	99	95.255	ENSMLEG00000036120	UPF2	64	100.000	Mandrillus_leucophaeus
ENSPPYG00000002089	-	100	84.652	ENSMAMG00000018276	UPF2	66	84.734	Mastacembelus_armatus
ENSPPYG00000002089	-	100	85.172	ENSMZEG00005021595	UPF2	66	84.935	Maylandia_zebra
ENSPPYG00000002089	-	99	94.139	ENSMGAG00000004573	UPF2	66	94.139	Meleagris_gallopavo
ENSPPYG00000002089	-	100	95.096	ENSMAUG00000016512	Upf2	65	95.096	Mesocricetus_auratus
ENSPPYG00000002089	-	92	99.490	ENSMICG00000001716	UPF2	63	99.482	Microcebus_murinus
ENSPPYG00000002089	-	100	97.847	ENSMOCG00000008263	Upf2	66	97.847	Microtus_ochrogaster
ENSPPYG00000002089	-	99	81.807	ENSMMOG00000006528	UPF2	65	81.384	Mola_mola
ENSPPYG00000002089	-	100	96.651	ENSMODG00000016794	UPF2	66	96.651	Monodelphis_domestica
ENSPPYG00000002089	-	99	84.167	ENSMALG00000002663	UPF2	65	84.368	Monopterus_albus
ENSPPYG00000002089	-	100	98.684	MGP_CAROLIEiJ_G0023157	Upf2	100	98.667	Mus_caroli
ENSPPYG00000002089	-	100	98.086	ENSMUSG00000043241	Upf2	99	97.714	Mus_musculus
ENSPPYG00000002089	-	100	97.608	MGP_PahariEiJ_G0019217	Upf2	100	97.333	Mus_pahari
ENSPPYG00000002089	-	100	98.086	MGP_SPRETEiJ_G0024075	Upf2	100	97.714	Mus_spretus
ENSPPYG00000002089	-	100	99.282	ENSMPUG00000001064	UPF2	66	99.282	Mustela_putorius_furo
ENSPPYG00000002089	-	99	98.327	ENSMLUG00000000228	UPF2	66	98.327	Myotis_lucifugus
ENSPPYG00000002089	-	100	85.172	ENSNBRG00000013629	UPF2	66	84.935	Neolamprologus_brichardi
ENSPPYG00000002089	-	100	99.641	ENSNLEG00000012058	UPF2	66	99.641	Nomascus_leucogenys
ENSPPYG00000002089	-	81	100.000	ENSOPRG00000006801	-	54	100.000	Ochotona_princeps
ENSPPYG00000002089	-	100	97.727	ENSODEG00000001290	UPF2	66	97.727	Octodon_degus
ENSPPYG00000002089	-	100	85.291	ENSONIG00000017991	UPF2	66	85.053	Oreochromis_niloticus
ENSPPYG00000002089	-	56	97.447	ENSOANG00000019744	-	93	97.447	Ornithorhynchus_anatinus
ENSPPYG00000002089	-	99	98.921	ENSOCUG00000006230	UPF2	66	98.921	Oryctolagus_cuniculus
ENSPPYG00000002089	-	100	83.491	ENSORLG00000017189	UPF2	66	84.142	Oryzias_latipes
ENSPPYG00000002089	-	100	83.608	ENSORLG00020005969	UPF2	66	84.260	Oryzias_latipes_hni
ENSPPYG00000002089	-	100	83.608	ENSORLG00015005713	UPF2	66	84.260	Oryzias_latipes_hsok
ENSPPYG00000002089	-	100	78.276	ENSOMEG00000023420	UPF2	63	79.335	Oryzias_melastigma
ENSPPYG00000002089	-	100	99.163	ENSOGAG00000005796	UPF2	66	99.163	Otolemur_garnettii
ENSPPYG00000002089	-	100	98.807	ENSOARG00000014587	UPF2	66	98.807	Ovis_aries
ENSPPYG00000002089	-	99	93.713	ENSPPAG00000037953	UPF2	65	94.844	Pan_paniscus
ENSPPYG00000002089	-	100	99.163	ENSPPRG00000000690	UPF2	66	99.163	Panthera_pardus
ENSPPYG00000002089	-	100	99.163	ENSPTIG00000008867	UPF2	66	99.163	Panthera_tigris_altaica
ENSPPYG00000002089	-	100	99.761	ENSPTRG00000002291	UPF2	66	99.761	Pan_troglodytes
ENSPPYG00000002089	-	100	99.761	ENSPANG00000023399	UPF2	66	99.761	Papio_anubis
ENSPPYG00000002089	-	100	83.986	ENSPKIG00000025502	UPF2	66	84.223	Paramormyrops_kingsleyae
ENSPPYG00000002089	-	99	81.623	ENSPMGG00000005259	UPF2	66	82.697	Periophthalmus_magnuspinnatus
ENSPPYG00000002089	-	99	82.614	ENSPEMG00000015731	Upf2	69	83.094	Peromyscus_maniculatus_bairdii
ENSPPYG00000002089	-	100	96.531	ENSPCIG00000006656	UPF2	66	96.531	Phascolarctos_cinereus
ENSPPYG00000002089	-	100	85.291	ENSPFOG00000017118	UPF2	66	84.698	Poecilia_formosa
ENSPPYG00000002089	-	100	85.291	ENSPLAG00000005094	UPF2	66	84.698	Poecilia_latipinna
ENSPPYG00000002089	-	100	85.291	ENSPMEG00000017009	UPF2	66	84.698	Poecilia_mexicana
ENSPPYG00000002089	-	99	84.726	ENSPREG00000021880	UPF2	65	84.726	Poecilia_reticulata
ENSPPYG00000002089	-	100	84.450	ENSPCAG00000000684	UPF2	66	84.450	Procavia_capensis
ENSPPYG00000002089	-	99	94.724	ENSPCOG00000021656	UPF2	65	94.964	Propithecus_coquereli
ENSPPYG00000002089	-	100	89.354	ENSPVAG00000017286	UPF2	66	89.354	Pteropus_vampyrus
ENSPPYG00000002089	-	99	81.451	ENSPNYG00000017096	UPF2	65	81.213	Pundamilia_nyererei
ENSPPYG00000002089	-	100	84.935	ENSPNAG00000009357	UPF2	66	85.765	Pygocentrus_nattereri
ENSPPYG00000002089	-	99	88.319	ENSRNOG00000023593	Upf2	100	100.000	Rattus_norvegicus
ENSPPYG00000002089	-	99	99.760	ENSRBIG00000037780	UPF2	66	99.760	Rhinopithecus_bieti
ENSPPYG00000002089	-	100	99.761	ENSRROG00000043547	UPF2	66	99.761	Rhinopithecus_roxellana
ENSPPYG00000002089	-	100	99.402	ENSSBOG00000020012	UPF2	66	99.402	Saimiri_boliviensis_boliviensis
ENSPPYG00000002089	-	100	84.970	ENSSFOG00015023788	upf2	66	84.734	Scleropages_formosus
ENSPPYG00000002089	-	99	82.012	ENSSMAG00000007637	UPF2	65	82.367	Scophthalmus_maximus
ENSPPYG00000002089	-	100	84.698	ENSSDUG00000017244	UPF2	65	84.935	Seriola_dumerili
ENSPPYG00000002089	-	99	82.100	ENSSLDG00000016866	UPF2	65	82.458	Seriola_lalandi_dorsalis
ENSPPYG00000002089	-	100	96.411	ENSSARG00000008615	UPF2	66	96.411	Sorex_araneus
ENSPPYG00000002089	-	99	92.216	ENSSPUG00000014544	UPF2	72	96.907	Sphenodon_punctatus
ENSPPYG00000002089	-	100	98.923	ENSSSCG00000011117	-	96	98.923	Sus_scrofa
ENSPPYG00000002089	-	99	94.958	ENSTGUG00000002163	-	66	94.958	Taeniopygia_guttata
ENSPPYG00000002089	-	100	84.497	ENSTRUG00000007519	UPF2	65	84.379	Takifugu_rubripes
ENSPPYG00000002089	-	100	84.061	ENSTNIG00000004453	UPF2	68	83.943	Tetraodon_nigroviridis
ENSPPYG00000002089	-	89	87.668	ENSTBEG00000012679	UPF2	59	88.204	Tupaia_belangeri
ENSPPYG00000002089	-	100	99.043	ENSTTRG00000016388	UPF2	66	99.043	Tursiops_truncatus
ENSPPYG00000002089	-	92	100.000	ENSUAMG00000023560	UPF2	64	100.000	Ursus_americanus
ENSPPYG00000002089	-	100	99.282	ENSUMAG00000012953	UPF2	63	99.282	Ursus_maritimus
ENSPPYG00000002089	-	77	96.774	ENSVPAG00000006763	UPF2	51	96.774	Vicugna_pacos
ENSPPYG00000002089	-	100	98.923	ENSVVUG00000006166	UPF2	66	98.923	Vulpes_vulpes
ENSPPYG00000002089	-	100	88.109	ENSXETG00000033103	UPF2	66	87.500	Xenopus_tropicalis
ENSPPYG00000002089	-	99	84.542	ENSXCOG00000011604	UPF2	66	84.423	Xiphophorus_couchianus
ENSPPYG00000002089	-	100	84.935	ENSXMAG00000017209	UPF2	66	84.342	Xiphophorus_maculatus