EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSPPYG00000002113 (Gene tree)
Gene ID: 100438762
Gene Symbol: RPP38
Alias: -
Full Name: ribonuclease P/MRP subunit p38
Gene Type: protein_coding
Species: Pongo_abelii
Status: putative
Strand: Plus strand
Length: 852 bases
Position: chr10:15783522-15784373
Accession: 100438762
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPPYP00000002450	Ribosomal_L7Ae	PF01248.26	1.5e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPPYT00000002525	RPP38-201	852	-	ENSPPYP00000002450	283 (aa)	XP_002820596	A0A2J8VKN3

Gene Model

Click here to download ENSPPYG00000002113's gene model file

Pathways

Pathway ID	Pathway Name	Source
pon03008	Ribosome biogenesis in eukaryotes	KEGG
pon03013	RNA transport	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPPYG00000002113's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPPYG00000002113	RPP38	100	98.233	ENSG00000152464	RPP38	100	98.810	Homo_sapiens
ENSPPYG00000002113	RPP38	94	43.636	ENSAPOG00000001240	rpp38	96	44.086	Acanthochromis_polyacanthus
ENSPPYG00000002113	RPP38	100	80.212	ENSAMEG00000018832	RPP38	100	80.212	Ailuropoda_melanoleuca
ENSPPYG00000002113	RPP38	88	42.751	ENSACIG00000011592	rpp38	92	43.071	Amphilophus_citrinellus
ENSPPYG00000002113	RPP38	94	43.206	ENSAOCG00000017293	rpp38	97	43.643	Amphiprion_ocellaris
ENSPPYG00000002113	RPP38	94	45.255	ENSAPEG00000002315	rpp38	96	45.683	Amphiprion_percula
ENSPPYG00000002113	RPP38	96	43.165	ENSATEG00000000731	rpp38	98	43.165	Anabas_testudineus
ENSPPYG00000002113	RPP38	92	50.943	ENSAPLG00000002054	RPP38	96	51.625	Anas_platyrhynchos
ENSPPYG00000002113	RPP38	94	42.336	ENSACLG00000016962	rpp38	97	41.935	Astatotilapia_calliptera
ENSPPYG00000002113	RPP38	94	42.701	ENSACLG00000016958	rpp38	97	42.294	Astatotilapia_calliptera
ENSPPYG00000002113	RPP38	89	46.032	ENSAMXG00000025023	rpp38	98	45.848	Astyanax_mexicanus
ENSPPYG00000002113	RPP38	100	74.205	ENSBTAG00000007702	RPP38	100	74.205	Bos_taurus
ENSPPYG00000002113	RPP38	100	76.325	ENSCAFG00000024373	RPP38	100	76.325	Canis_familiaris
ENSPPYG00000002113	RPP38	100	76.325	ENSCAFG00020008008	RPP38	100	76.325	Canis_lupus_dingo
ENSPPYG00000002113	RPP38	100	74.912	ENSCHIG00000012484	RPP38	100	74.912	Capra_hircus
ENSPPYG00000002113	RPP38	99	77.143	ENSCPOG00000003981	RPP38	99	76.868	Cavia_porcellus
ENSPPYG00000002113	RPP38	100	77.465	ENSCLAG00000010194	RPP38	100	77.465	Chinchilla_lanigera
ENSPPYG00000002113	RPP38	100	94.346	ENSCSAG00000019055	RPP38	100	94.346	Chlorocebus_sabaeus
ENSPPYG00000002113	RPP38	100	84.155	ENSCHOG00000004335	RPP38	100	84.155	Choloepus_hoffmanni
ENSPPYG00000002113	RPP38	100	74.737	ENSCGRG00001001395	Rpp38	100	76.491	Cricetulus_griseus_chok1gshd
ENSPPYG00000002113	RPP38	100	74.737	ENSCGRG00000017441	Rpp38	100	76.491	Cricetulus_griseus_crigri
ENSPPYG00000002113	RPP38	94	41.935	ENSCSEG00000001721	rpp38	99	42.308	Cynoglossus_semilaevis
ENSPPYG00000002113	RPP38	95	42.361	ENSCVAG00000001676	rpp38	97	42.808	Cyprinodon_variegatus
ENSPPYG00000002113	RPP38	90	46.484	ENSDARG00000040350	rpp38	96	45.756	Danio_rerio
ENSPPYG00000002113	RPP38	100	80.565	ENSDNOG00000040314	RPP38	100	80.565	Dasypus_novemcinctus
ENSPPYG00000002113	RPP38	100	69.014	ENSDORG00000009783	Rpp38	100	69.014	Dipodomys_ordii
ENSPPYG00000002113	RPP38	100	75.704	ENSETEG00000002839	RPP38	100	75.704	Echinops_telfairi
ENSPPYG00000002113	RPP38	99	79.928	ENSEASG00005019783	RPP38	98	79.928	Equus_asinus_asinus
ENSPPYG00000002113	RPP38	100	72.792	ENSEEUG00000014677	RPP38	100	72.792	Erinaceus_europaeus
ENSPPYG00000002113	RPP38	88	43.478	ENSELUG00000010160	rpp38	94	44.056	Esox_lucius
ENSPPYG00000002113	RPP38	100	76.325	ENSFCAG00000022449	RPP38	100	76.325	Felis_catus
ENSPPYG00000002113	RPP38	92	51.111	ENSFALG00000014804	RPP38	94	51.773	Ficedula_albicollis
ENSPPYG00000002113	RPP38	99	79.004	ENSFDAG00000018669	RPP38	99	79.004	Fukomys_damarensis
ENSPPYG00000002113	RPP38	95	40.636	ENSFHEG00000013741	rpp38	100	42.857	Fundulus_heteroclitus
ENSPPYG00000002113	RPP38	92	50.758	ENSGALG00000008794	RPP38	92	51.079	Gallus_gallus
ENSPPYG00000002113	RPP38	58	48.503	ENSGACG00000009258	rpp38	97	48.503	Gasterosteus_aculeatus
ENSPPYG00000002113	RPP38	94	42.701	ENSHBUG00000010937	rpp38	97	42.652	Haplochromis_burtoni
ENSPPYG00000002113	RPP38	99	77.143	ENSHGLG00000012144	RPP38	99	77.143	Heterocephalus_glaber_female
ENSPPYG00000002113	RPP38	88	42.400	ENSIPUG00000022879	rpp38	99	42.806	Ictalurus_punctatus
ENSPPYG00000002113	RPP38	100	78.092	ENSSTOG00000025699	RPP38	98	78.092	Ictidomys_tridecemlineatus
ENSPPYG00000002113	RPP38	100	76.842	ENSJJAG00000007523	Rpp38	100	76.491	Jaculus_jaculus
ENSPPYG00000002113	RPP38	88	42.748	ENSKMAG00000003986	rpp38	93	42.446	Kryptolebias_marmoratus
ENSPPYG00000002113	RPP38	92	43.956	ENSLBEG00000006853	rpp38	94	44.689	Labrus_bergylta
ENSPPYG00000002113	RPP38	95	51.930	ENSLACG00000006502	RPP38	100	51.667	Latimeria_chalumnae
ENSPPYG00000002113	RPP38	94	49.638	ENSLOCG00000018347	rpp38	94	49.281	Lepisosteus_oculatus
ENSPPYG00000002113	RPP38	100	81.690	ENSLAFG00000000509	RPP38	100	81.338	Loxodonta_africana
ENSPPYG00000002113	RPP38	100	93.993	ENSMMUG00000007679	RPP38	100	93.993	Macaca_mulatta
ENSPPYG00000002113	RPP38	96	44.840	ENSMAMG00000012774	rpp38	96	44.643	Mastacembelus_armatus
ENSPPYG00000002113	RPP38	94	42.701	ENSMZEG00005003189	rpp38	97	42.652	Maylandia_zebra
ENSPPYG00000002113	RPP38	94	42.701	ENSMZEG00005003200	rpp38	97	42.294	Maylandia_zebra
ENSPPYG00000002113	RPP38	92	51.128	ENSMGAG00000008217	RPP38	92	51.812	Meleagris_gallopavo
ENSPPYG00000002113	RPP38	100	74.386	ENSMAUG00000003644	Rpp38	100	76.140	Mesocricetus_auratus
ENSPPYG00000002113	RPP38	100	76.491	ENSMOCG00000007020	Rpp38	100	76.140	Microtus_ochrogaster
ENSPPYG00000002113	RPP38	93	41.786	ENSMMOG00000003446	rpp38	94	42.182	Mola_mola
ENSPPYG00000002113	RPP38	95	67.159	ENSMODG00000024091	RPP38	100	66.667	Monodelphis_domestica
ENSPPYG00000002113	RPP38	91	41.509	ENSMALG00000002356	rpp38	93	41.509	Monopterus_albus
ENSPPYG00000002113	RPP38	100	76.842	MGP_CAROLIEiJ_G0023133	Rpp38	100	76.842	Mus_caroli
ENSPPYG00000002113	RPP38	100	76.491	ENSMUSG00000049950	Rpp38	100	76.491	Mus_musculus
ENSPPYG00000002113	RPP38	100	77.544	MGP_PahariEiJ_G0019193	Rpp38	100	77.544	Mus_pahari
ENSPPYG00000002113	RPP38	100	75.789	MGP_SPRETEiJ_G0024051	Rpp38	100	75.789	Mus_spretus
ENSPPYG00000002113	RPP38	99	77.224	ENSMPUG00000018523	RPP38	99	77.224	Mustela_putorius_furo
ENSPPYG00000002113	RPP38	94	82.642	ENSMLUG00000002153	RPP38	100	82.332	Myotis_lucifugus
ENSPPYG00000002113	RPP38	100	75.789	ENSNGAG00000011066	Rpp38	100	75.789	Nannospalax_galili
ENSPPYG00000002113	RPP38	94	43.214	ENSNBRG00000006994	rpp38	98	42.446	Neolamprologus_brichardi
ENSPPYG00000002113	RPP38	94	42.857	ENSONIG00000020467	rpp38	96	42.652	Oreochromis_niloticus
ENSPPYG00000002113	RPP38	94	77.444	ENSOCUG00000022768	-	100	77.113	Oryctolagus_cuniculus
ENSPPYG00000002113	RPP38	94	76.316	ENSOCUG00000024367	-	100	76.056	Oryctolagus_cuniculus
ENSPPYG00000002113	RPP38	88	41.667	ENSORLG00000009219	rpp38	96	40.357	Oryzias_latipes
ENSPPYG00000002113	RPP38	88	42.803	ENSORLG00020011503	rpp38	90	41.264	Oryzias_latipes_hni
ENSPPYG00000002113	RPP38	88	41.699	ENSORLG00015017702	rpp38	90	40.741	Oryzias_latipes_hsok
ENSPPYG00000002113	RPP38	88	42.023	ENSOMEG00000005414	rpp38	99	40.136	Oryzias_melastigma
ENSPPYG00000002113	RPP38	100	83.392	ENSOGAG00000008059	RPP38	100	83.392	Otolemur_garnettii
ENSPPYG00000002113	RPP38	100	75.618	ENSOARG00000004534	RPP38	100	75.618	Ovis_aries
ENSPPYG00000002113	RPP38	100	98.587	ENSPPAG00000041577	RPP38	91	98.587	Pan_paniscus
ENSPPYG00000002113	RPP38	100	76.325	ENSPPRG00000015329	RPP38	100	76.325	Panthera_pardus
ENSPPYG00000002113	RPP38	100	75.972	ENSPTIG00000007188	RPP38	100	75.972	Panthera_tigris_altaica
ENSPPYG00000002113	RPP38	100	98.233	ENSPTRG00000002318	RPP38	91	98.233	Pan_troglodytes
ENSPPYG00000002113	RPP38	93	44.604	ENSPKIG00000025652	rpp38	93	44.803	Paramormyrops_kingsleyae
ENSPPYG00000002113	RPP38	97	57.706	ENSPSIG00000001527	RPP38	98	57.544	Pelodiscus_sinensis
ENSPPYG00000002113	RPP38	100	76.842	ENSPEMG00000008375	Rpp38	100	78.246	Peromyscus_maniculatus_bairdii
ENSPPYG00000002113	RPP38	100	69.474	ENSPCIG00000009096	RPP38	94	69.123	Phascolarctos_cinereus
ENSPPYG00000002113	RPP38	61	45.652	ENSPFOG00000016823	rpp38	82	45.652	Poecilia_formosa
ENSPPYG00000002113	RPP38	89	40.840	ENSPLAG00000007626	rpp38	91	42.264	Poecilia_latipinna
ENSPPYG00000002113	RPP38	88	38.372	ENSPMEG00000020392	rpp38	93	38.519	Poecilia_mexicana
ENSPPYG00000002113	RPP38	96	41.053	ENSPREG00000017744	rpp38	97	40.702	Poecilia_reticulata
ENSPPYG00000002113	RPP38	94	80.000	ENSPVAG00000007155	RPP38	100	79.859	Pteropus_vampyrus
ENSPPYG00000002113	RPP38	94	42.701	ENSPNYG00000004293	rpp38	97	42.652	Pundamilia_nyererei
ENSPPYG00000002113	RPP38	88	44.314	ENSPNAG00000010633	rpp38	99	44.964	Pygocentrus_nattereri
ENSPPYG00000002113	RPP38	98	73.477	ENSRNOG00000038025	Rpp38	99	73.477	Rattus_norvegicus
ENSPPYG00000002113	RPP38	100	69.123	ENSSHAG00000015529	RPP38	100	69.474	Sarcophilus_harrisii
ENSPPYG00000002113	RPP38	94	43.116	ENSSMAG00000018276	rpp38	95	43.116	Scophthalmus_maximus
ENSPPYG00000002113	RPP38	94	42.182	ENSSDUG00000001651	rpp38	98	43.110	Seriola_dumerili
ENSPPYG00000002113	RPP38	94	42.182	ENSSLDG00000014355	rpp38	98	42.500	Seriola_lalandi_dorsalis
ENSPPYG00000002113	RPP38	100	56.890	ENSSARG00000012099	RPP38	100	56.537	Sorex_araneus
ENSPPYG00000002113	RPP38	99	56.993	ENSSPUG00000018363	-	99	56.643	Sphenodon_punctatus
ENSPPYG00000002113	RPP38	96	53.986	ENSSPUG00000008560	-	97	53.623	Sphenodon_punctatus
ENSPPYG00000002113	RPP38	100	58.333	ENSSPUG00000005237	-	100	57.292	Sphenodon_punctatus
ENSPPYG00000002113	RPP38	94	44.161	ENSSPAG00000020387	rpp38	96	44.604	Stegastes_partitus
ENSPPYG00000002113	RPP38	100	72.727	ENSSSCG00000027110	RPP38	100	72.727	Sus_scrofa
ENSPPYG00000002113	RPP38	92	49.259	ENSTGUG00000001366	RPP38	97	50.000	Taeniopygia_guttata
ENSPPYG00000002113	RPP38	95	42.958	ENSTNIG00000001334	rpp38	97	42.606	Tetraodon_nigroviridis
ENSPPYG00000002113	RPP38	100	74.558	ENSTTRG00000004420	RPP38	100	74.558	Tursiops_truncatus
ENSPPYG00000002113	RPP38	100	79.859	ENSUAMG00000002618	RPP38	100	79.859	Ursus_americanus
ENSPPYG00000002113	RPP38	100	78.521	ENSUMAG00000012382	RPP38	100	79.577	Ursus_maritimus
ENSPPYG00000002113	RPP38	100	75.265	ENSVVUG00000005272	RPP38	100	75.265	Vulpes_vulpes
ENSPPYG00000002113	RPP38	92	47.601	ENSXETG00000003419	rpp38	97	48.043	Xenopus_tropicalis