EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSPPYG00000002531 (Gene tree)
Gene ID: 100433800
Gene Symbol: EXOSC1
Alias: CGI-108|CSL4|Csl4p|SKI4|Ski4p|hCsl4p|p13
Full Name: exosome component 1
Gene Type: protein_coding
Species: Pongo_abelii
Status: putative
Strand: Minus strand
Length: 9763 bases
Position: chr10:96418164-96427926
Accession: 100433800
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPPYP00000002937	EXOSC1	PF10447.9	4.6e-15	1	1
ENSPPYP00000002937	ECR1_N	PF14382.6	4.7e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPPYT00000003040	EXOSC1-201	714	-	ENSPPYP00000002937	195 (aa)	XP_009243946	A0A2J8XXW5

Gene Model

Click here to download ENSPPYG00000002531's gene model file

Pathways

Pathway ID	Pathway Name	Source
pon03018	RNA degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPPYG00000002531's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPPYG00000002531	EXOSC1	100	99.487	ENSG00000171311	EXOSC1	100	99.487	Homo_sapiens
ENSPPYG00000002531	EXOSC1	98	80.105	ENSAPOG00000007822	exosc1	98	80.105	Acanthochromis_polyacanthus
ENSPPYG00000002531	EXOSC1	100	96.923	ENSAMEG00000000129	EXOSC1	100	96.923	Ailuropoda_melanoleuca
ENSPPYG00000002531	EXOSC1	96	79.787	ENSACIG00000018956	exosc1	92	79.787	Amphilophus_citrinellus
ENSPPYG00000002531	EXOSC1	98	80.105	ENSAOCG00000010699	exosc1	98	80.105	Amphiprion_ocellaris
ENSPPYG00000002531	EXOSC1	92	70.950	ENSAPEG00000012690	exosc1	96	70.950	Amphiprion_percula
ENSPPYG00000002531	EXOSC1	98	79.581	ENSATEG00000018683	exosc1	98	79.581	Anabas_testudineus
ENSPPYG00000002531	EXOSC1	99	83.938	ENSACAG00000002101	EXOSC1	99	83.938	Anolis_carolinensis
ENSPPYG00000002531	EXOSC1	100	97.949	ENSANAG00000034669	EXOSC1	100	97.949	Aotus_nancymaae
ENSPPYG00000002531	EXOSC1	98	80.105	ENSACLG00000021243	exosc1	98	80.105	Astatotilapia_calliptera
ENSPPYG00000002531	EXOSC1	98	81.675	ENSAMXG00000011116	exosc1	98	81.675	Astyanax_mexicanus
ENSPPYG00000002531	EXOSC1	100	96.410	ENSBTAG00000012699	EXOSC1	100	96.410	Bos_taurus
ENSPPYG00000002531	EXOSC1	92	32.979	WBGene00012966	exos-1	90	32.979	Caenorhabditis_elegans
ENSPPYG00000002531	EXOSC1	100	97.436	ENSCJAG00000016586	EXOSC1	100	97.436	Callithrix_jacchus
ENSPPYG00000002531	EXOSC1	100	96.410	ENSCAFG00000009068	EXOSC1	94	96.410	Canis_familiaris
ENSPPYG00000002531	EXOSC1	100	96.410	ENSCAFG00020006002	EXOSC1	94	96.410	Canis_lupus_dingo
ENSPPYG00000002531	EXOSC1	100	96.410	ENSCHIG00000015253	EXOSC1	100	96.410	Capra_hircus
ENSPPYG00000002531	EXOSC1	100	95.897	ENSTSYG00000000760	EXOSC1	100	95.897	Carlito_syrichta
ENSPPYG00000002531	EXOSC1	100	96.410	ENSCPOG00000001173	EXOSC1	100	96.410	Cavia_porcellus
ENSPPYG00000002531	EXOSC1	100	56.345	ENSCCAG00000023986	EXOSC1	100	56.345	Cebus_capucinus
ENSPPYG00000002531	EXOSC1	100	99.487	ENSCATG00000034114	EXOSC1	100	99.487	Cercocebus_atys
ENSPPYG00000002531	EXOSC1	100	96.923	ENSCLAG00000002463	EXOSC1	100	96.923	Chinchilla_lanigera
ENSPPYG00000002531	EXOSC1	100	98.974	ENSCSAG00000005870	EXOSC1	100	98.974	Chlorocebus_sabaeus
ENSPPYG00000002531	EXOSC1	96	82.353	ENSCHOG00000006477	EXOSC1	100	82.353	Choloepus_hoffmanni
ENSPPYG00000002531	EXOSC1	54	82.075	ENSCPBG00000011949	EXOSC1	88	82.075	Chrysemys_picta_bellii
ENSPPYG00000002531	EXOSC1	95	55.615	ENSCING00000022734	-	89	55.615	Ciona_intestinalis
ENSPPYG00000002531	EXOSC1	95	57.219	ENSCSAVG00000010865	-	95	57.219	Ciona_savignyi
ENSPPYG00000002531	EXOSC1	100	99.487	ENSCANG00000034159	EXOSC1	100	99.487	Colobus_angolensis_palliatus
ENSPPYG00000002531	EXOSC1	100	95.385	ENSCGRG00001000335	Exosc1	100	95.385	Cricetulus_griseus_chok1gshd
ENSPPYG00000002531	EXOSC1	100	95.385	ENSCGRG00000011602	Exosc1	100	95.385	Cricetulus_griseus_crigri
ENSPPYG00000002531	EXOSC1	98	67.016	ENSCSEG00000007895	exosc1	95	67.016	Cynoglossus_semilaevis
ENSPPYG00000002531	EXOSC1	98	76.042	ENSCVAG00000016748	exosc1	99	76.042	Cyprinodon_variegatus
ENSPPYG00000002531	EXOSC1	98	80.628	ENSDARG00000059841	exosc1	98	80.628	Danio_rerio
ENSPPYG00000002531	EXOSC1	75	96.622	ENSDNOG00000007983	EXOSC1	100	96.622	Dasypus_novemcinctus
ENSPPYG00000002531	EXOSC1	100	95.897	ENSDORG00000016528	Exosc1	100	95.897	Dipodomys_ordii
ENSPPYG00000002531	EXOSC1	94	48.148	FBgn0032346	Csl4	92	48.148	Drosophila_melanogaster
ENSPPYG00000002531	EXOSC1	100	94.359	ENSETEG00000002469	-	100	94.359	Echinops_telfairi
ENSPPYG00000002531	EXOSC1	99	62.245	ENSEBUG00000008164	exosc1	98	62.245	Eptatretus_burgeri
ENSPPYG00000002531	EXOSC1	100	87.179	ENSEASG00005008684	EXOSC1	100	87.179	Equus_asinus_asinus
ENSPPYG00000002531	EXOSC1	61	78.151	ENSECAG00000010621	EXOSC1	71	78.151	Equus_caballus
ENSPPYG00000002531	EXOSC1	100	96.410	ENSEEUG00000005647	EXOSC1	100	96.410	Erinaceus_europaeus
ENSPPYG00000002531	EXOSC1	94	80.978	ENSELUG00000017369	exosc1	81	80.978	Esox_lucius
ENSPPYG00000002531	EXOSC1	100	96.923	ENSFCAG00000040563	EXOSC1	94	96.923	Felis_catus
ENSPPYG00000002531	EXOSC1	100	82.564	ENSFALG00000008450	EXOSC1	100	82.564	Ficedula_albicollis
ENSPPYG00000002531	EXOSC1	100	96.923	ENSFDAG00000000846	EXOSC1	100	96.923	Fukomys_damarensis
ENSPPYG00000002531	EXOSC1	98	76.440	ENSFHEG00000009154	exosc1	98	76.440	Fundulus_heteroclitus
ENSPPYG00000002531	EXOSC1	98	80.105	ENSGMOG00000008993	exosc1	98	80.105	Gadus_morhua
ENSPPYG00000002531	EXOSC1	100	71.282	ENSGALG00000039917	EXOSC1	100	85.616	Gallus_gallus
ENSPPYG00000002531	EXOSC1	98	76.562	ENSGAFG00000010265	exosc1	94	76.562	Gambusia_affinis
ENSPPYG00000002531	EXOSC1	98	80.105	ENSGACG00000018936	exosc1	98	80.105	Gasterosteus_aculeatus
ENSPPYG00000002531	EXOSC1	100	85.128	ENSGAGG00000019192	EXOSC1	100	85.128	Gopherus_agassizii
ENSPPYG00000002531	EXOSC1	100	85.641	ENSGGOG00000003099	EXOSC1	100	85.641	Gorilla_gorilla
ENSPPYG00000002531	EXOSC1	98	80.105	ENSHBUG00000017857	exosc1	98	80.105	Haplochromis_burtoni
ENSPPYG00000002531	EXOSC1	100	96.410	ENSHGLG00000016927	EXOSC1	100	96.410	Heterocephalus_glaber_female
ENSPPYG00000002531	EXOSC1	100	96.410	ENSHGLG00100012208	EXOSC1	100	96.410	Heterocephalus_glaber_male
ENSPPYG00000002531	EXOSC1	98	79.058	ENSHCOG00000019882	exosc1	98	79.058	Hippocampus_comes
ENSPPYG00000002531	EXOSC1	98	80.105	ENSIPUG00000007685	exosc1	98	80.105	Ictalurus_punctatus
ENSPPYG00000002531	EXOSC1	100	96.923	ENSSTOG00000006615	EXOSC1	100	96.923	Ictidomys_tridecemlineatus
ENSPPYG00000002531	EXOSC1	63	81.967	ENSSTOG00000029860	-	93	81.967	Ictidomys_tridecemlineatus
ENSPPYG00000002531	EXOSC1	100	95.897	ENSJJAG00000013311	Exosc1	100	95.897	Jaculus_jaculus
ENSPPYG00000002531	EXOSC1	98	78.125	ENSKMAG00000001202	exosc1	81	78.125	Kryptolebias_marmoratus
ENSPPYG00000002531	EXOSC1	98	79.581	ENSLBEG00000011448	exosc1	98	79.581	Labrus_bergylta
ENSPPYG00000002531	EXOSC1	98	59.596	ENSLOCG00000003776	exosc1	99	59.596	Lepisosteus_oculatus
ENSPPYG00000002531	EXOSC1	100	96.410	ENSLAFG00000015983	EXOSC1	100	96.410	Loxodonta_africana
ENSPPYG00000002531	EXOSC1	100	99.487	ENSMFAG00000001493	EXOSC1	100	99.487	Macaca_fascicularis
ENSPPYG00000002531	EXOSC1	100	99.487	ENSMMUG00000020028	EXOSC1	100	92.462	Macaca_mulatta
ENSPPYG00000002531	EXOSC1	100	99.487	ENSMNEG00000029816	EXOSC1	100	99.487	Macaca_nemestrina
ENSPPYG00000002531	EXOSC1	100	93.846	ENSMLEG00000027643	EXOSC1	100	93.846	Mandrillus_leucophaeus
ENSPPYG00000002531	EXOSC1	98	80.208	ENSMAMG00000012200	exosc1	99	80.208	Mastacembelus_armatus
ENSPPYG00000002531	EXOSC1	98	80.105	ENSMZEG00005007042	exosc1	98	80.105	Maylandia_zebra
ENSPPYG00000002531	EXOSC1	100	83.590	ENSMAUG00000020462	-	100	83.590	Mesocricetus_auratus
ENSPPYG00000002531	EXOSC1	100	96.410	ENSMICG00000007664	EXOSC1	92	96.410	Microcebus_murinus
ENSPPYG00000002531	EXOSC1	97	88.947	ENSMOCG00000017124	-	97	88.947	Microtus_ochrogaster
ENSPPYG00000002531	EXOSC1	100	95.385	ENSMOCG00000006004	-	100	95.385	Microtus_ochrogaster
ENSPPYG00000002531	EXOSC1	99	60.825	ENSMMOG00000021403	exosc1	99	60.825	Mola_mola
ENSPPYG00000002531	EXOSC1	100	91.327	ENSMODG00000004213	EXOSC1	100	91.327	Monodelphis_domestica
ENSPPYG00000002531	EXOSC1	94	80.978	ENSMALG00000007061	exosc1	92	80.978	Monopterus_albus
ENSPPYG00000002531	EXOSC1	100	94.872	MGP_CAROLIEiJ_G0022959	Exosc1	100	94.872	Mus_caroli
ENSPPYG00000002531	EXOSC1	100	95.385	ENSMUSG00000034321	Exosc1	100	95.385	Mus_musculus
ENSPPYG00000002531	EXOSC1	100	95.385	MGP_PahariEiJ_G0014449	Exosc1	100	95.385	Mus_pahari
ENSPPYG00000002531	EXOSC1	100	94.872	MGP_SPRETEiJ_G0023880	Exosc1	100	94.872	Mus_spretus
ENSPPYG00000002531	EXOSC1	100	96.923	ENSMPUG00000017044	EXOSC1	100	96.923	Mustela_putorius_furo
ENSPPYG00000002531	EXOSC1	100	96.410	ENSMLUG00000009228	EXOSC1	100	96.410	Myotis_lucifugus
ENSPPYG00000002531	EXOSC1	100	94.359	ENSNGAG00000022033	Exosc1	100	94.359	Nannospalax_galili
ENSPPYG00000002531	EXOSC1	98	60.938	ENSNBRG00000024007	exosc1	98	60.938	Neolamprologus_brichardi
ENSPPYG00000002531	EXOSC1	100	98.974	ENSNLEG00000013872	EXOSC1	100	98.974	Nomascus_leucogenys
ENSPPYG00000002531	EXOSC1	59	90.435	ENSMEUG00000002246	EXOSC1	100	90.435	Notamacropus_eugenii
ENSPPYG00000002531	EXOSC1	100	94.872	ENSOPRG00000005065	EXOSC1	100	94.872	Ochotona_princeps
ENSPPYG00000002531	EXOSC1	100	96.410	ENSODEG00000016709	EXOSC1	100	96.410	Octodon_degus
ENSPPYG00000002531	EXOSC1	98	80.105	ENSONIG00000017683	exosc1	98	80.105	Oreochromis_niloticus
ENSPPYG00000002531	EXOSC1	59	92.174	ENSOANG00000006563	EXOSC1	98	90.323	Ornithorhynchus_anatinus
ENSPPYG00000002531	EXOSC1	100	95.408	ENSOCUG00000011898	-	100	95.408	Oryctolagus_cuniculus
ENSPPYG00000002531	EXOSC1	100	91.282	ENSOCUG00000026461	-	100	91.282	Oryctolagus_cuniculus
ENSPPYG00000002531	EXOSC1	98	78.646	ENSORLG00000011595	exosc1	98	78.646	Oryzias_latipes
ENSPPYG00000002531	EXOSC1	98	78.646	ENSORLG00020005831	exosc1	98	78.646	Oryzias_latipes_hni
ENSPPYG00000002531	EXOSC1	98	78.646	ENSORLG00015004317	exosc1	98	78.646	Oryzias_latipes_hsok
ENSPPYG00000002531	EXOSC1	98	63.874	ENSOMEG00000013907	exosc1	98	63.874	Oryzias_melastigma
ENSPPYG00000002531	EXOSC1	100	95.897	ENSOGAG00000016259	EXOSC1	100	95.897	Otolemur_garnettii
ENSPPYG00000002531	EXOSC1	100	95.897	ENSOARG00000010136	EXOSC1	100	95.897	Ovis_aries
ENSPPYG00000002531	EXOSC1	100	93.401	ENSPPAG00000039842	EXOSC1	100	93.401	Pan_paniscus
ENSPPYG00000002531	EXOSC1	100	96.923	ENSPPRG00000023366	EXOSC1	100	96.923	Panthera_pardus
ENSPPYG00000002531	EXOSC1	100	96.923	ENSPTIG00000017701	EXOSC1	100	96.923	Panthera_tigris_altaica
ENSPPYG00000002531	EXOSC1	100	99.487	ENSPTRG00000002808	EXOSC1	100	99.487	Pan_troglodytes
ENSPPYG00000002531	EXOSC1	100	99.487	ENSPANG00000021324	EXOSC1	100	99.487	Papio_anubis
ENSPPYG00000002531	EXOSC1	98	80.628	ENSPKIG00000016037	exosc1	98	80.628	Paramormyrops_kingsleyae
ENSPPYG00000002531	EXOSC1	75	82.192	ENSPSIG00000013571	EXOSC1	98	80.328	Pelodiscus_sinensis
ENSPPYG00000002531	EXOSC1	98	67.016	ENSPMGG00000014002	exosc1	98	67.016	Periophthalmus_magnuspinnatus
ENSPPYG00000002531	EXOSC1	100	95.385	ENSPEMG00000010710	-	100	95.385	Peromyscus_maniculatus_bairdii
ENSPPYG00000002531	EXOSC1	95	71.123	ENSPMAG00000000195	exosc1	95	71.123	Petromyzon_marinus
ENSPPYG00000002531	EXOSC1	100	92.308	ENSPCIG00000002210	EXOSC1	99	92.308	Phascolarctos_cinereus
ENSPPYG00000002531	EXOSC1	98	76.042	ENSPFOG00000006755	exosc1	94	76.042	Poecilia_formosa
ENSPPYG00000002531	EXOSC1	98	76.042	ENSPLAG00000005880	exosc1	99	76.042	Poecilia_latipinna
ENSPPYG00000002531	EXOSC1	98	76.042	ENSPMEG00000015598	exosc1	94	76.042	Poecilia_mexicana
ENSPPYG00000002531	EXOSC1	98	64.583	ENSPREG00000000405	exosc1	93	64.583	Poecilia_reticulata
ENSPPYG00000002531	EXOSC1	100	95.897	ENSPCAG00000009135	EXOSC1	100	95.897	Procavia_capensis
ENSPPYG00000002531	EXOSC1	100	90.256	ENSPCOG00000027539	EXOSC1	100	90.256	Propithecus_coquereli
ENSPPYG00000002531	EXOSC1	100	96.923	ENSPVAG00000003372	EXOSC1	100	96.923	Pteropus_vampyrus
ENSPPYG00000002531	EXOSC1	98	80.105	ENSPNYG00000021745	exosc1	98	80.105	Pundamilia_nyererei
ENSPPYG00000002531	EXOSC1	98	80.628	ENSPNAG00000001944	exosc1	98	80.628	Pygocentrus_nattereri
ENSPPYG00000002531	EXOSC1	100	95.385	ENSRNOG00000048708	Exosc1	100	95.385	Rattus_norvegicus
ENSPPYG00000002531	EXOSC1	100	99.487	ENSRBIG00000035618	EXOSC1	100	99.487	Rhinopithecus_bieti
ENSPPYG00000002531	EXOSC1	100	99.487	ENSRROG00000032589	EXOSC1	92	99.487	Rhinopithecus_roxellana
ENSPPYG00000002531	EXOSC1	64	36.250	YNL232W	CSL4	54	36.250	Saccharomyces_cerevisiae
ENSPPYG00000002531	EXOSC1	100	97.949	ENSSBOG00000000359	EXOSC1	100	97.949	Saimiri_boliviensis_boliviensis
ENSPPYG00000002531	EXOSC1	75	94.558	ENSSHAG00000018219	EXOSC1	100	94.558	Sarcophilus_harrisii
ENSPPYG00000002531	EXOSC1	98	81.250	ENSSFOG00015009069	exosc1	99	81.250	Scleropages_formosus
ENSPPYG00000002531	EXOSC1	97	78.421	ENSSFOG00015016289	-	98	78.421	Scleropages_formosus
ENSPPYG00000002531	EXOSC1	98	80.628	ENSSMAG00000003721	exosc1	98	80.628	Scophthalmus_maximus
ENSPPYG00000002531	EXOSC1	98	80.628	ENSSDUG00000002993	exosc1	98	80.628	Seriola_dumerili
ENSPPYG00000002531	EXOSC1	98	80.628	ENSSLDG00000025181	exosc1	98	80.628	Seriola_lalandi_dorsalis
ENSPPYG00000002531	EXOSC1	100	83.077	ENSSARG00000000162	EXOSC1	100	83.077	Sorex_araneus
ENSPPYG00000002531	EXOSC1	99	84.021	ENSSPUG00000012263	EXOSC1	99	84.021	Sphenodon_punctatus
ENSPPYG00000002531	EXOSC1	98	71.728	ENSSPAG00000016792	exosc1	82	71.728	Stegastes_partitus
ENSPPYG00000002531	EXOSC1	100	95.897	ENSSSCG00000010518	EXOSC1	91	95.897	Sus_scrofa
ENSPPYG00000002531	EXOSC1	98	80.729	ENSTGUG00000009692	EXOSC1	99	80.729	Taeniopygia_guttata
ENSPPYG00000002531	EXOSC1	97	74.074	ENSTRUG00000007706	exosc1	98	74.074	Takifugu_rubripes
ENSPPYG00000002531	EXOSC1	97	73.575	ENSTNIG00000014079	exosc1	97	73.575	Tetraodon_nigroviridis
ENSPPYG00000002531	EXOSC1	100	88.205	ENSTBEG00000006011	EXOSC1	100	88.205	Tupaia_belangeri
ENSPPYG00000002531	EXOSC1	94	96.739	ENSTTRG00000009887	EXOSC1	100	96.739	Tursiops_truncatus
ENSPPYG00000002531	EXOSC1	100	79.487	ENSUAMG00000010266	EXOSC1	100	79.487	Ursus_americanus
ENSPPYG00000002531	EXOSC1	100	80.513	ENSUMAG00000022002	EXOSC1	100	80.513	Ursus_maritimus
ENSPPYG00000002531	EXOSC1	100	96.410	ENSVVUG00000023192	EXOSC1	63	96.410	Vulpes_vulpes
ENSPPYG00000002531	EXOSC1	98	78.646	ENSXETG00000003434	exosc1	99	78.646	Xenopus_tropicalis
ENSPPYG00000002531	EXOSC1	62	84.167	ENSXCOG00000014499	exosc1	92	84.167	Xiphophorus_couchianus
ENSPPYG00000002531	EXOSC1	98	65.104	ENSXMAG00000023382	exosc1	93	65.104	Xiphophorus_maculatus