EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPPYG00000002676 (Gene tree)
Gene ID: 100172112
Gene Symbol: TRUB1
Alias: -
Full Name: Pongo abelii TruB pseudouridine synthase family member 1 (TRUB1)%2C mRNA.
Gene Type: protein_coding
Species: Pongo_abelii
Status: putative
Strand: Plus strand
Length: 39949 bases
Position: chr10:114377210-114417158
Accession: NM_001131747
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPPYP00000003125	TruB_N	PF01509.18	2.3e-50	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPPYT00000003231	-	3408	XM_009245813	ENSPPYP00000003125	349 (aa)	XP_009244088	H2NBP6

Gene Model

Click here to download ENSPPYG00000002676's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPPYG00000002676's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPPYG00000002676	TRUB1	58	33.654	ENSPPYG00000019650	TRUB2	63	33.654

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPPYG00000002676	TRUB1	100	98.567	ENSG00000165832	TRUB1	100	98.567	Homo_sapiens
ENSPPYG00000002676	TRUB1	70	68.163	ENSAPOG00000020565	trub1	89	67.886	Acanthochromis_polyacanthus
ENSPPYG00000002676	TRUB1	96	92.899	ENSAMEG00000014931	TRUB1	96	92.899	Ailuropoda_melanoleuca
ENSPPYG00000002676	TRUB1	70	62.195	ENSACIG00000003060	trub1	82	62.195	Amphilophus_citrinellus
ENSPPYG00000002676	TRUB1	70	68.163	ENSAOCG00000017188	trub1	89	67.886	Amphiprion_ocellaris
ENSPPYG00000002676	TRUB1	70	67.480	ENSAPEG00000015209	trub1	89	67.480	Amphiprion_percula
ENSPPYG00000002676	TRUB1	69	68.465	ENSATEG00000023291	trub1	86	68.465	Anabas_testudineus
ENSPPYG00000002676	TRUB1	79	75.636	ENSAPLG00000006808	TRUB1	99	75.636	Anas_platyrhynchos
ENSPPYG00000002676	TRUB1	77	70.896	ENSACAG00000009282	TRUB1	97	70.896	Anolis_carolinensis
ENSPPYG00000002676	TRUB1	100	96.296	ENSANAG00000022870	TRUB1	100	96.296	Aotus_nancymaae
ENSPPYG00000002676	TRUB1	72	66.667	ENSACLG00000000823	trub1	91	66.667	Astatotilapia_calliptera
ENSPPYG00000002676	TRUB1	77	65.556	ENSAMXG00000015845	trub1	90	65.556	Astyanax_mexicanus
ENSPPYG00000002676	TRUB1	98	92.398	ENSBTAG00000012955	TRUB1	95	92.857	Bos_taurus
ENSPPYG00000002676	TRUB1	100	96.581	ENSCJAG00000047815	TRUB1	96	97.033	Callithrix_jacchus
ENSPPYG00000002676	TRUB1	99	92.837	ENSCAFG00000011688	TRUB1	96	93.155	Canis_familiaris
ENSPPYG00000002676	TRUB1	99	93.123	ENSCAFG00020013237	TRUB1	96	93.452	Canis_lupus_dingo
ENSPPYG00000002676	TRUB1	98	92.690	ENSCHIG00000020884	TRUB1	96	93.155	Capra_hircus
ENSPPYG00000002676	TRUB1	100	90.598	ENSTSYG00000000446	TRUB1	96	92.012	Carlito_syrichta
ENSPPYG00000002676	TRUB1	72	84.646	ENSCAPG00000017088	TRUB1	100	84.646	Cavia_aperea
ENSPPYG00000002676	TRUB1	71	80.645	ENSCPOG00000030129	-	82	80.000	Cavia_porcellus
ENSPPYG00000002676	TRUB1	70	86.122	ENSCPOG00000040236	-	95	87.500	Cavia_porcellus
ENSPPYG00000002676	TRUB1	96	96.439	ENSCCAG00000028842	TRUB1	96	96.439	Cebus_capucinus
ENSPPYG00000002676	TRUB1	100	97.714	ENSCATG00000033431	TRUB1	100	97.714	Cercocebus_atys
ENSPPYG00000002676	TRUB1	70	88.571	ENSCLAG00000008664	TRUB1	95	90.086	Chinchilla_lanigera
ENSPPYG00000002676	TRUB1	100	98.000	ENSCSAG00000004891	TRUB1	100	98.000	Chlorocebus_sabaeus
ENSPPYG00000002676	TRUB1	99	78.261	ENSCHOG00000011931	TRUB1	95	78.916	Choloepus_hoffmanni
ENSPPYG00000002676	TRUB1	78	79.044	ENSCPBG00000003051	TRUB1	94	79.044	Chrysemys_picta_bellii
ENSPPYG00000002676	TRUB1	100	98.000	ENSCANG00000029445	TRUB1	100	98.000	Colobus_angolensis_palliatus
ENSPPYG00000002676	TRUB1	72	86.614	ENSCGRG00001016772	-	90	78.451	Cricetulus_griseus_chok1gshd
ENSPPYG00000002676	TRUB1	80	78.929	ENSCGRG00001010322	-	79	78.912	Cricetulus_griseus_chok1gshd
ENSPPYG00000002676	TRUB1	80	87.857	ENSCGRG00000010806	Trub1	91	87.205	Cricetulus_griseus_crigri
ENSPPYG00000002676	TRUB1	73	62.500	ENSCSEG00000011261	trub1	97	56.250	Cynoglossus_semilaevis
ENSPPYG00000002676	TRUB1	74	65.504	ENSCVAG00000008791	trub1	79	65.504	Cyprinodon_variegatus
ENSPPYG00000002676	TRUB1	75	67.300	ENSDARG00000053805	trub1	90	67.300	Danio_rerio
ENSPPYG00000002676	TRUB1	97	86.765	ENSDNOG00000001069	TRUB1	95	87.164	Dasypus_novemcinctus
ENSPPYG00000002676	TRUB1	99	89.685	ENSDORG00000010431	Trub1	96	89.583	Dipodomys_ordii
ENSPPYG00000002676	TRUB1	81	76.471	ENSETEG00000009183	TRUB1	77	77.895	Echinops_telfairi
ENSPPYG00000002676	TRUB1	96	92.857	ENSEASG00005014739	TRUB1	96	92.857	Equus_asinus_asinus
ENSPPYG00000002676	TRUB1	96	92.857	ENSECAG00000007177	TRUB1	96	92.857	Equus_caballus
ENSPPYG00000002676	TRUB1	99	76.257	ENSEEUG00000013993	TRUB1	96	77.907	Erinaceus_europaeus
ENSPPYG00000002676	TRUB1	70	69.388	ENSELUG00000000502	trub1	86	69.388	Esox_lucius
ENSPPYG00000002676	TRUB1	96	93.134	ENSFCAG00000031927	TRUB1	96	93.134	Felis_catus
ENSPPYG00000002676	TRUB1	66	78.355	ENSFALG00000002232	TRUB1	92	76.250	Ficedula_albicollis
ENSPPYG00000002676	TRUB1	70	86.831	ENSFDAG00000008140	TRUB1	95	89.224	Fukomys_damarensis
ENSPPYG00000002676	TRUB1	70	66.122	ENSFHEG00000004016	trub1	84	66.122	Fundulus_heteroclitus
ENSPPYG00000002676	TRUB1	78	75.000	ENSGALG00000009091	TRUB1	97	74.057	Gallus_gallus
ENSPPYG00000002676	TRUB1	70	63.934	ENSGAFG00000009193	trub1	86	63.934	Gambusia_affinis
ENSPPYG00000002676	TRUB1	56	67.692	ENSGACG00000015387	trub1	96	67.692	Gasterosteus_aculeatus
ENSPPYG00000002676	TRUB1	83	77.241	ENSGAGG00000009758	TRUB1	81	77.817	Gopherus_agassizii
ENSPPYG00000002676	TRUB1	100	98.854	ENSGGOG00000004583	TRUB1	100	98.854	Gorilla_gorilla
ENSPPYG00000002676	TRUB1	72	66.667	ENSHBUG00000016787	trub1	91	66.667	Haplochromis_burtoni
ENSPPYG00000002676	TRUB1	99	86.246	ENSHGLG00000015314	TRUB1	96	87.500	Heterocephalus_glaber_female
ENSPPYG00000002676	TRUB1	70	86.122	ENSHGLG00100009183	TRUB1	95	87.500	Heterocephalus_glaber_male
ENSPPYG00000002676	TRUB1	70	68.163	ENSHCOG00000017877	trub1	89	68.163	Hippocampus_comes
ENSPPYG00000002676	TRUB1	80	64.516	ENSIPUG00000017559	trub1	98	64.516	Ictalurus_punctatus
ENSPPYG00000002676	TRUB1	86	94.352	ENSSTOG00000003641	TRUB1	95	88.589	Ictidomys_tridecemlineatus
ENSPPYG00000002676	TRUB1	99	84.527	ENSJJAG00000011800	Trub1	88	91.304	Jaculus_jaculus
ENSPPYG00000002676	TRUB1	75	64.045	ENSKMAG00000006232	trub1	94	64.045	Kryptolebias_marmoratus
ENSPPYG00000002676	TRUB1	76	64.528	ENSLBEG00000026722	trub1	92	64.528	Labrus_bergylta
ENSPPYG00000002676	TRUB1	79	73.188	ENSLACG00000014885	TRUB1	92	73.188	Latimeria_chalumnae
ENSPPYG00000002676	TRUB1	78	70.330	ENSLOCG00000012979	trub1	93	70.330	Lepisosteus_oculatus
ENSPPYG00000002676	TRUB1	100	79.050	ENSLAFG00000015452	TRUB1	96	79.942	Loxodonta_africana
ENSPPYG00000002676	TRUB1	100	97.714	ENSMFAG00000031767	TRUB1	100	97.714	Macaca_fascicularis
ENSPPYG00000002676	TRUB1	100	98.000	ENSMMUG00000001902	TRUB1	100	98.000	Macaca_mulatta
ENSPPYG00000002676	TRUB1	100	93.429	ENSMNEG00000044646	TRUB1	96	93.472	Macaca_nemestrina
ENSPPYG00000002676	TRUB1	100	97.714	ENSMLEG00000042655	TRUB1	100	97.714	Mandrillus_leucophaeus
ENSPPYG00000002676	TRUB1	72	66.667	ENSMZEG00005024095	trub1	91	66.667	Maylandia_zebra
ENSPPYG00000002676	TRUB1	75	75.954	ENSMGAG00000011135	TRUB1	90	75.954	Meleagris_gallopavo
ENSPPYG00000002676	TRUB1	85	84.564	ENSMAUG00000011101	Trub1	89	84.667	Mesocricetus_auratus
ENSPPYG00000002676	TRUB1	99	94.842	ENSMICG00000016324	TRUB1	96	95.536	Microcebus_murinus
ENSPPYG00000002676	TRUB1	86	86.379	ENSMOCG00000017759	Trub1	91	86.333	Microtus_ochrogaster
ENSPPYG00000002676	TRUB1	82	82.517	ENSMODG00000009676	TRUB1	81	80.743	Monodelphis_domestica
ENSPPYG00000002676	TRUB1	99	80.516	MGP_CAROLIEiJ_G0023100	Trub1	96	81.250	Mus_caroli
ENSPPYG00000002676	TRUB1	99	79.656	ENSMUSG00000025086	Trub1	96	80.357	Mus_musculus
ENSPPYG00000002676	TRUB1	99	80.516	MGP_PahariEiJ_G0014588	Trub1	96	81.250	Mus_pahari
ENSPPYG00000002676	TRUB1	99	79.943	MGP_SPRETEiJ_G0024021	Trub1	96	80.655	Mus_spretus
ENSPPYG00000002676	TRUB1	96	94.345	ENSMPUG00000003556	TRUB1	96	94.345	Mustela_putorius_furo
ENSPPYG00000002676	TRUB1	96	87.761	ENSMLUG00000017686	TRUB1	96	87.834	Myotis_lucifugus
ENSPPYG00000002676	TRUB1	99	85.960	ENSNGAG00000018682	Trub1	97	87.500	Nannospalax_galili
ENSPPYG00000002676	TRUB1	70	67.886	ENSNBRG00000023393	trub1	88	67.886	Neolamprologus_brichardi
ENSPPYG00000002676	TRUB1	100	98.567	ENSNLEG00000016345	TRUB1	100	98.567	Nomascus_leucogenys
ENSPPYG00000002676	TRUB1	58	90.050	ENSMEUG00000006603	TRUB1	78	87.204	Notamacropus_eugenii
ENSPPYG00000002676	TRUB1	86	85.382	ENSOPRG00000009371	TRUB1	94	82.515	Ochotona_princeps
ENSPPYG00000002676	TRUB1	99	84.241	ENSODEG00000010854	TRUB1	96	85.119	Octodon_degus
ENSPPYG00000002676	TRUB1	70	67.073	ENSONIG00000007249	trub1	89	67.073	Oreochromis_niloticus
ENSPPYG00000002676	TRUB1	78	79.927	ENSOANG00000001556	TRUB1	93	77.739	Ornithorhynchus_anatinus
ENSPPYG00000002676	TRUB1	86	88.704	ENSOCUG00000009456	TRUB1	96	85.586	Oryctolagus_cuniculus
ENSPPYG00000002676	TRUB1	76	64.773	ENSORLG00000029719	trub1	92	64.773	Oryzias_latipes
ENSPPYG00000002676	TRUB1	76	64.394	ENSORLG00020016767	trub1	91	64.394	Oryzias_latipes_hni
ENSPPYG00000002676	TRUB1	76	64.394	ENSORLG00015014728	trub1	92	64.394	Oryzias_latipes_hsok
ENSPPYG00000002676	TRUB1	74	66.023	ENSOMEG00000014556	trub1	89	66.406	Oryzias_melastigma
ENSPPYG00000002676	TRUB1	99	93.696	ENSOGAG00000015895	TRUB1	96	95.238	Otolemur_garnettii
ENSPPYG00000002676	TRUB1	84	93.709	ENSOARG00000015591	TRUB1	96	88.047	Ovis_aries
ENSPPYG00000002676	TRUB1	100	99.140	ENSPPAG00000043645	TRUB1	100	99.140	Pan_paniscus
ENSPPYG00000002676	TRUB1	96	92.537	ENSPPRG00000007096	TRUB1	96	92.537	Panthera_pardus
ENSPPYG00000002676	TRUB1	96	92.836	ENSPTIG00000006378	TRUB1	96	92.836	Panthera_tigris_altaica
ENSPPYG00000002676	TRUB1	100	99.140	ENSPTRG00000002964	TRUB1	100	99.140	Pan_troglodytes
ENSPPYG00000002676	TRUB1	100	97.714	ENSPANG00000020712	TRUB1	100	97.714	Papio_anubis
ENSPPYG00000002676	TRUB1	78	77.206	ENSPSIG00000012877	TRUB1	93	77.206	Pelodiscus_sinensis
ENSPPYG00000002676	TRUB1	70	66.122	ENSPMGG00000000075	trub1	88	66.122	Periophthalmus_magnuspinnatus
ENSPPYG00000002676	TRUB1	86	85.000	ENSPEMG00000011156	Trub1	88	85.000	Peromyscus_maniculatus_bairdii
ENSPPYG00000002676	TRUB1	82	81.818	ENSPCIG00000009729	TRUB1	79	80.822	Phascolarctos_cinereus
ENSPPYG00000002676	TRUB1	70	65.714	ENSPFOG00000009950	trub1	90	65.714	Poecilia_formosa
ENSPPYG00000002676	TRUB1	70	65.714	ENSPLAG00000013855	trub1	86	65.714	Poecilia_latipinna
ENSPPYG00000002676	TRUB1	70	65.714	ENSPMEG00000009064	trub1	88	65.714	Poecilia_mexicana
ENSPPYG00000002676	TRUB1	70	66.531	ENSPREG00000003343	trub1	88	66.531	Poecilia_reticulata
ENSPPYG00000002676	TRUB1	100	75.568	ENSPCAG00000008427	TRUB1	96	76.331	Procavia_capensis
ENSPPYG00000002676	TRUB1	99	90.544	ENSPCOG00000024360	TRUB1	96	91.045	Propithecus_coquereli
ENSPPYG00000002676	TRUB1	76	91.667	ENSPVAG00000007575	TRUB1	95	92.430	Pteropus_vampyrus
ENSPPYG00000002676	TRUB1	72	66.667	ENSPNYG00000018614	trub1	91	66.667	Pundamilia_nyererei
ENSPPYG00000002676	TRUB1	78	58.088	ENSPNAG00000006881	trub1	88	58.088	Pygocentrus_nattereri
ENSPPYG00000002676	TRUB1	99	81.089	ENSRNOG00000017321	Trub1	96	81.845	Rattus_norvegicus
ENSPPYG00000002676	TRUB1	100	87.714	ENSRBIG00000033423	TRUB1	96	87.834	Rhinopithecus_bieti
ENSPPYG00000002676	TRUB1	100	97.429	ENSRROG00000033902	TRUB1	100	97.429	Rhinopithecus_roxellana
ENSPPYG00000002676	TRUB1	96	96.736	ENSSBOG00000024237	TRUB1	96	96.736	Saimiri_boliviensis_boliviensis
ENSPPYG00000002676	TRUB1	72	80.469	ENSSHAG00000009346	TRUB1	86	80.469	Sarcophilus_harrisii
ENSPPYG00000002676	TRUB1	70	69.959	ENSSFOG00015022124	trub1	83	69.959	Scleropages_formosus
ENSPPYG00000002676	TRUB1	70	68.293	ENSSMAG00000001020	trub1	88	68.293	Scophthalmus_maximus
ENSPPYG00000002676	TRUB1	69	68.750	ENSSDUG00000016414	trub1	88	68.699	Seriola_dumerili
ENSPPYG00000002676	TRUB1	69	69.167	ENSSLDG00000015486	trub1	88	69.106	Seriola_lalandi_dorsalis
ENSPPYG00000002676	TRUB1	85	74.747	ENSSPUG00000001642	TRUB1	96	77.143	Sphenodon_punctatus
ENSPPYG00000002676	TRUB1	76	65.909	ENSSPAG00000001217	trub1	94	65.909	Stegastes_partitus
ENSPPYG00000002676	TRUB1	99	87.679	ENSSSCG00000010653	TRUB1	96	88.393	Sus_scrofa
ENSPPYG00000002676	TRUB1	77	75.926	ENSTGUG00000010971	TRUB1	97	75.735	Taeniopygia_guttata
ENSPPYG00000002676	TRUB1	72	77.075	ENSTBEG00000002880	TRUB1	99	77.075	Tupaia_belangeri
ENSPPYG00000002676	TRUB1	72	90.040	ENSTTRG00000005767	TRUB1	95	89.243	Tursiops_truncatus
ENSPPYG00000002676	TRUB1	96	94.345	ENSUAMG00000024876	TRUB1	96	94.345	Ursus_americanus
ENSPPYG00000002676	TRUB1	84	96.949	ENSUMAG00000002411	TRUB1	96	90.179	Ursus_maritimus
ENSPPYG00000002676	TRUB1	99	92.550	ENSVPAG00000005507	TRUB1	96	92.857	Vicugna_pacos
ENSPPYG00000002676	TRUB1	99	91.404	ENSVVUG00000010085	TRUB1	80	91.667	Vulpes_vulpes
ENSPPYG00000002676	TRUB1	77	66.045	ENSXETG00000023828	trub1	97	66.045	Xenopus_tropicalis
ENSPPYG00000002676	TRUB1	70	64.609	ENSXCOG00000017847	trub1	86	64.609	Xiphophorus_couchianus
ENSPPYG00000002676	TRUB1	70	64.898	ENSXMAG00000014701	trub1	88	64.898	Xiphophorus_maculatus