EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPPYG00000002819 (Gene tree)
Gene ID: -
Gene Symbol: A1CF
Alias: ACF
Full Name: Pongo abelii APOBEC1 complementation factor (A1CF)%2C mRNA.
Gene Type: protein_coding
Species: Pongo_abelii
Status: putative
Strand: Minus strand
Length: 82836 bases
Position: chr10_random:31023570-31106405
Accession: NM_001133965
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPPYP00000003286	DND1_DSRM	PF14709.7	7.9e-25	1	1
ENSPPYP00000003286	RRM_1	PF00076.22	4.9e-40	1	3
ENSPPYP00000003286	RRM_1	PF00076.22	4.9e-40	2	3
ENSPPYP00000003286	RRM_1	PF00076.22	4.9e-40	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPPYT00000003396	-	5499	-	ENSPPYP00000003286	587 (aa)	-	A0A2J8WQR0

Gene Model

Click here to download ENSPPYG00000002819's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPPYG00000002819's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPPYG00000002819	A1CF	73	54.091	ENSPPYG00000014688	RBM47	72	54.545
ENSPPYG00000002819	A1CF	74	72.667	ENSPPYG00000015144	RBM46	78	70.701
ENSPPYG00000002819	A1CF	52	52.427	ENSPPYG00000016819	SYNCRIP	57	51.077
ENSPPYG00000002819	A1CF	53	52.215	ENSPPYG00000001744	HNRNPR	50	52.215

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPPYG00000002819	A1CF	100	98.807	ENSG00000148584	A1CF	100	99.005	Homo_sapiens
ENSPPYG00000002819	A1CF	100	74.622	ENSAPOG00000008259	a1cf	100	74.454	Acanthochromis_polyacanthus
ENSPPYG00000002819	A1CF	100	94.790	ENSAMEG00000000523	A1CF	100	94.790	Ailuropoda_melanoleuca
ENSPPYG00000002819	A1CF	100	76.694	ENSACIG00000008632	a1cf	100	78.017	Amphilophus_citrinellus
ENSPPYG00000002819	A1CF	100	75.290	ENSAOCG00000023744	a1cf	96	84.638	Amphiprion_ocellaris
ENSPPYG00000002819	A1CF	100	74.141	ENSAPEG00000009537	a1cf	100	74.795	Amphiprion_percula
ENSPPYG00000002819	A1CF	100	77.063	ENSATEG00000013720	a1cf	100	78.383	Anabas_testudineus
ENSPPYG00000002819	A1CF	100	87.919	ENSAPLG00000002964	A1CF	100	87.919	Anas_platyrhynchos
ENSPPYG00000002819	A1CF	100	84.354	ENSACAG00000015269	A1CF	100	84.184	Anolis_carolinensis
ENSPPYG00000002819	A1CF	100	98.978	ENSANAG00000019974	A1CF	100	98.978	Aotus_nancymaae
ENSPPYG00000002819	A1CF	100	74.338	ENSACLG00000017428	a1cf	100	76.159	Astatotilapia_calliptera
ENSPPYG00000002819	A1CF	100	73.884	ENSAMXG00000018180	a1cf	100	74.215	Astyanax_mexicanus
ENSPPYG00000002819	A1CF	100	96.252	ENSBTAG00000021195	A1CF	100	97.026	Bos_taurus
ENSPPYG00000002819	A1CF	100	97.983	ENSCJAG00000005045	A1CF	100	97.983	Callithrix_jacchus
ENSPPYG00000002819	A1CF	100	94.286	ENSCAFG00000015581	A1CF	100	94.622	Canis_familiaris
ENSPPYG00000002819	A1CF	100	94.286	ENSCAFG00020026421	A1CF	100	94.622	Canis_lupus_dingo
ENSPPYG00000002819	A1CF	100	94.454	ENSCHIG00000020411	A1CF	100	94.454	Capra_hircus
ENSPPYG00000002819	A1CF	94	97.834	ENSTSYG00000001755	A1CF	100	97.834	Carlito_syrichta
ENSPPYG00000002819	A1CF	100	83.129	ENSCAPG00000017386	A1CF	100	83.129	Cavia_aperea
ENSPPYG00000002819	A1CF	100	95.462	ENSCPOG00000009807	A1CF	100	95.462	Cavia_porcellus
ENSPPYG00000002819	A1CF	100	97.479	ENSCCAG00000018168	A1CF	100	97.479	Cebus_capucinus
ENSPPYG00000002819	A1CF	100	98.637	ENSCATG00000043715	A1CF	100	98.637	Cercocebus_atys
ENSPPYG00000002819	A1CF	100	95.302	ENSCLAG00000010424	A1CF	100	95.302	Chinchilla_lanigera
ENSPPYG00000002819	A1CF	100	97.311	ENSCSAG00000007032	A1CF	100	97.311	Chlorocebus_sabaeus
ENSPPYG00000002819	A1CF	98	91.581	ENSCHOG00000009089	A1CF	98	91.753	Choloepus_hoffmanni
ENSPPYG00000002819	A1CF	100	87.584	ENSCPBG00000026464	A1CF	100	87.416	Chrysemys_picta_bellii
ENSPPYG00000002819	A1CF	100	97.311	ENSCANG00000038032	A1CF	100	97.311	Colobus_angolensis_palliatus
ENSPPYG00000002819	A1CF	100	93.445	ENSCGRG00001017413	A1cf	100	93.445	Cricetulus_griseus_chok1gshd
ENSPPYG00000002819	A1CF	100	92.773	ENSCGRG00000017332	A1cf	100	92.773	Cricetulus_griseus_crigri
ENSPPYG00000002819	A1CF	100	74.129	ENSCSEG00000002361	a1cf	100	75.456	Cynoglossus_semilaevis
ENSPPYG00000002819	A1CF	100	76.073	ENSCVAG00000010520	a1cf	100	77.558	Cyprinodon_variegatus
ENSPPYG00000002819	A1CF	100	79.258	ENSDARG00000002968	a1cf	100	80.776	Danio_rerio
ENSPPYG00000002819	A1CF	100	94.286	ENSDNOG00000002829	A1CF	100	94.286	Dasypus_novemcinctus
ENSPPYG00000002819	A1CF	82	93.478	ENSETEG00000012527	A1CF	81	93.478	Echinops_telfairi
ENSPPYG00000002819	A1CF	100	96.147	ENSEASG00005012924	A1CF	100	96.147	Equus_asinus_asinus
ENSPPYG00000002819	A1CF	100	95.645	ENSECAG00000010424	A1CF	100	95.645	Equus_caballus
ENSPPYG00000002819	A1CF	78	82.353	ENSEEUG00000000013	A1CF	97	83.333	Erinaceus_europaeus
ENSPPYG00000002819	A1CF	100	77.704	ENSELUG00000003159	a1cf	100	78.536	Esox_lucius
ENSPPYG00000002819	A1CF	100	94.037	ENSFCAG00000011179	A1CF	100	94.719	Felis_catus
ENSPPYG00000002819	A1CF	100	87.755	ENSFALG00000013183	A1CF	100	87.585	Ficedula_albicollis
ENSPPYG00000002819	A1CF	100	96.082	ENSFDAG00000019371	A1CF	100	96.082	Fukomys_damarensis
ENSPPYG00000002819	A1CF	100	71.287	ENSFHEG00000019652	a1cf	96	82.031	Fundulus_heteroclitus
ENSPPYG00000002819	A1CF	100	71.287	ENSGMOG00000018943	a1cf	100	71.287	Gadus_morhua
ENSPPYG00000002819	A1CF	95	87.080	ENSGALG00000003765	A1CF	97	86.903	Gallus_gallus
ENSPPYG00000002819	A1CF	100	71.167	ENSGAFG00000014868	a1cf	100	72.167	Gambusia_affinis
ENSPPYG00000002819	A1CF	100	73.191	ENSGACG00000010241	a1cf	100	73.684	Gasterosteus_aculeatus
ENSPPYG00000002819	A1CF	94	87.211	ENSGAGG00000016508	A1CF	97	87.034	Gopherus_agassizii
ENSPPYG00000002819	A1CF	100	97.647	ENSGGOG00000009670	A1CF	100	97.647	Gorilla_gorilla
ENSPPYG00000002819	A1CF	100	75.702	ENSHBUG00000021959	a1cf	100	77.686	Haplochromis_burtoni
ENSPPYG00000002819	A1CF	100	95.462	ENSHGLG00000008955	A1CF	100	95.462	Heterocephalus_glaber_female
ENSPPYG00000002819	A1CF	100	94.790	ENSHGLG00100000518	A1CF	100	94.790	Heterocephalus_glaber_male
ENSPPYG00000002819	A1CF	100	69.055	ENSHCOG00000017669	a1cf	100	71.707	Hippocampus_comes
ENSPPYG00000002819	A1CF	89	82.276	ENSIPUG00000010367	a1cf	96	82.276	Ictalurus_punctatus
ENSPPYG00000002819	A1CF	100	75.935	ENSKMAG00000006568	a1cf	100	76.748	Kryptolebias_marmoratus
ENSPPYG00000002819	A1CF	99	74.388	ENSLBEG00000020994	a1cf	98	75.862	Labrus_bergylta
ENSPPYG00000002819	A1CF	100	82.910	ENSLACG00000008061	A1CF	100	82.741	Latimeria_chalumnae
ENSPPYG00000002819	A1CF	100	81.167	ENSLOCG00000006302	a1cf	100	81.167	Lepisosteus_oculatus
ENSPPYG00000002819	A1CF	100	93.950	ENSLAFG00000015462	A1CF	100	93.950	Loxodonta_africana
ENSPPYG00000002819	A1CF	100	98.978	ENSMFAG00000035948	A1CF	100	98.978	Macaca_fascicularis
ENSPPYG00000002819	A1CF	100	98.978	ENSMMUG00000007077	A1CF	100	98.978	Macaca_mulatta
ENSPPYG00000002819	A1CF	100	98.637	ENSMNEG00000031454	A1CF	100	98.637	Macaca_nemestrina
ENSPPYG00000002819	A1CF	100	97.311	ENSMLEG00000037223	A1CF	100	97.311	Mandrillus_leucophaeus
ENSPPYG00000002819	A1CF	100	75.124	ENSMAMG00000010402	a1cf	100	77.318	Mastacembelus_armatus
ENSPPYG00000002819	A1CF	100	74.667	ENSMZEG00005013245	a1cf	100	75.667	Maylandia_zebra
ENSPPYG00000002819	A1CF	100	87.437	ENSMGAG00000001507	A1CF	100	87.270	Meleagris_gallopavo
ENSPPYG00000002819	A1CF	100	92.941	ENSMAUG00000007422	A1cf	100	92.941	Mesocricetus_auratus
ENSPPYG00000002819	A1CF	100	96.949	ENSMICG00000003377	A1CF	100	96.949	Microcebus_murinus
ENSPPYG00000002819	A1CF	100	93.109	ENSMOCG00000021536	A1cf	100	93.109	Microtus_ochrogaster
ENSPPYG00000002819	A1CF	100	68.159	ENSMMOG00000009422	a1cf	100	70.149	Mola_mola
ENSPPYG00000002819	A1CF	92	91.837	ENSMODG00000016478	A1CF	97	92.898	Monodelphis_domestica
ENSPPYG00000002819	A1CF	100	72.804	ENSMALG00000012992	a1cf	100	72.804	Monopterus_albus
ENSPPYG00000002819	A1CF	100	93.867	MGP_CAROLIEiJ_G0022873	A1cf	100	93.867	Mus_caroli
ENSPPYG00000002819	A1CF	100	93.867	ENSMUSG00000052595	A1cf	99	96.063	Mus_musculus
ENSPPYG00000002819	A1CF	100	93.015	MGP_PahariEiJ_G0014366	A1cf	100	93.015	Mus_pahari
ENSPPYG00000002819	A1CF	100	93.356	MGP_SPRETEiJ_G0023792	A1cf	100	93.356	Mus_spretus
ENSPPYG00000002819	A1CF	100	89.076	ENSMPUG00000016971	A1CF	100	89.076	Mustela_putorius_furo
ENSPPYG00000002819	A1CF	100	93.782	ENSMLUG00000016071	A1CF	100	93.782	Myotis_lucifugus
ENSPPYG00000002819	A1CF	100	94.454	ENSNGAG00000015136	A1cf	100	94.454	Nannospalax_galili
ENSPPYG00000002819	A1CF	100	76.033	ENSNBRG00000001712	a1cf	100	78.017	Neolamprologus_brichardi
ENSPPYG00000002819	A1CF	100	98.487	ENSNLEG00000012028	A1CF	100	98.487	Nomascus_leucogenys
ENSPPYG00000002819	A1CF	94	91.171	ENSMEUG00000015909	A1CF	100	90.991	Notamacropus_eugenii
ENSPPYG00000002819	A1CF	88	84.000	ENSOPRG00000010667	A1CF	97	84.151	Ochotona_princeps
ENSPPYG00000002819	A1CF	100	76.364	ENSONIG00000019105	a1cf	100	77.521	Oreochromis_niloticus
ENSPPYG00000002819	A1CF	78	90.850	ENSOANG00000007360	A1CF	99	90.850	Ornithorhynchus_anatinus
ENSPPYG00000002819	A1CF	100	96.599	ENSOCUG00000011587	A1CF	100	96.599	Oryctolagus_cuniculus
ENSPPYG00000002819	A1CF	100	72.977	ENSORLG00000013342	a1cf	100	72.977	Oryzias_latipes
ENSPPYG00000002819	A1CF	100	74.388	ENSORLG00020000586	a1cf	100	74.756	Oryzias_latipes_hni
ENSPPYG00000002819	A1CF	100	74.225	ENSORLG00015018569	a1cf	100	74.593	Oryzias_latipes_hsok
ENSPPYG00000002819	A1CF	100	76.285	ENSOMEG00000013531	a1cf	100	76.119	Oryzias_melastigma
ENSPPYG00000002819	A1CF	100	94.118	ENSOGAG00000012884	A1CF	100	94.454	Otolemur_garnettii
ENSPPYG00000002819	A1CF	100	94.454	ENSOARG00000013695	A1CF	100	94.454	Ovis_aries
ENSPPYG00000002819	A1CF	97	96.014	ENSPPAG00000028115	A1CF	100	97.571	Pan_paniscus
ENSPPYG00000002819	A1CF	100	93.109	ENSPPRG00000012180	A1CF	100	93.782	Panthera_pardus
ENSPPYG00000002819	A1CF	100	93.109	ENSPTIG00000021223	A1CF	100	93.782	Panthera_tigris_altaica
ENSPPYG00000002819	A1CF	100	98.807	ENSPTRG00000002508	A1CF	100	98.807	Pan_troglodytes
ENSPPYG00000002819	A1CF	100	98.978	ENSPANG00000021988	A1CF	100	98.978	Papio_anubis
ENSPPYG00000002819	A1CF	100	79.534	ENSPKIG00000025176	a1cf	100	79.534	Paramormyrops_kingsleyae
ENSPPYG00000002819	A1CF	100	88.605	ENSPSIG00000010318	A1CF	100	88.435	Pelodiscus_sinensis
ENSPPYG00000002819	A1CF	88	72.147	ENSPMGG00000013359	a1cf	99	68.339	Periophthalmus_magnuspinnatus
ENSPPYG00000002819	A1CF	100	93.613	ENSPEMG00000015021	A1cf	100	93.613	Peromyscus_maniculatus_bairdii
ENSPPYG00000002819	A1CF	100	91.156	ENSPCIG00000002175	A1CF	100	90.986	Phascolarctos_cinereus
ENSPPYG00000002819	A1CF	100	75.244	ENSPFOG00000007437	-	100	76.710	Poecilia_formosa
ENSPPYG00000002819	A1CF	100	75.407	ENSPFOG00000006683	a1cf	100	76.873	Poecilia_formosa
ENSPPYG00000002819	A1CF	100	76.238	ENSPLAG00000000026	a1cf	100	77.723	Poecilia_latipinna
ENSPPYG00000002819	A1CF	100	76.238	ENSPLAG00000001210	-	100	77.723	Poecilia_latipinna
ENSPPYG00000002819	A1CF	100	68.709	ENSPMEG00000000921	a1cf	100	70.199	Poecilia_mexicana
ENSPPYG00000002819	A1CF	100	67.810	ENSPMEG00000015529	-	100	69.281	Poecilia_mexicana
ENSPPYG00000002819	A1CF	100	74.919	ENSPREG00000016298	a1cf	100	76.384	Poecilia_reticulata
ENSPPYG00000002819	A1CF	79	75.269	ENSPCAG00000006463	A1CF	70	91.837	Procavia_capensis
ENSPPYG00000002819	A1CF	100	95.973	ENSPCOG00000024172	A1CF	100	95.973	Propithecus_coquereli
ENSPPYG00000002819	A1CF	100	74.878	ENSPNYG00000017944	a1cf	100	76.835	Pundamilia_nyererei
ENSPPYG00000002819	A1CF	100	81.544	ENSPNAG00000007704	a1cf	100	81.544	Pygocentrus_nattereri
ENSPPYG00000002819	A1CF	100	94.208	ENSRNOG00000033195	A1cf	100	94.208	Rattus_norvegicus
ENSPPYG00000002819	A1CF	100	90.452	ENSRBIG00000042892	A1CF	100	97.813	Rhinopithecus_bieti
ENSPPYG00000002819	A1CF	100	97.647	ENSRROG00000041398	A1CF	99	99.097	Rhinopithecus_roxellana
ENSPPYG00000002819	A1CF	100	97.815	ENSSBOG00000021930	A1CF	100	99.205	Saimiri_boliviensis_boliviensis
ENSPPYG00000002819	A1CF	100	90.136	ENSSHAG00000005096	A1CF	100	89.966	Sarcophilus_harrisii
ENSPPYG00000002819	A1CF	100	80.336	ENSSFOG00015011774	a1cf	100	80.336	Scleropages_formosus
ENSPPYG00000002819	A1CF	100	74.593	ENSSMAG00000013271	a1cf	100	74.919	Scophthalmus_maximus
ENSPPYG00000002819	A1CF	100	75.290	ENSSDUG00000013930	a1cf	100	76.285	Seriola_dumerili
ENSPPYG00000002819	A1CF	100	70.903	ENSSLDG00000004290	a1cf	100	71.906	Seriola_lalandi_dorsalis
ENSPPYG00000002819	A1CF	95	86.022	ENSSARG00000005940	A1CF	96	86.022	Sorex_araneus
ENSPPYG00000002819	A1CF	95	86.819	ENSSPUG00000006797	A1CF	95	85.940	Sphenodon_punctatus
ENSPPYG00000002819	A1CF	100	94.958	ENSSSCG00000010431	A1CF	100	94.958	Sus_scrofa
ENSPPYG00000002819	A1CF	100	86.622	ENSTGUG00000005090	A1CF	100	86.455	Taeniopygia_guttata
ENSPPYG00000002819	A1CF	100	73.899	ENSTRUG00000001982	a1cf	100	73.899	Takifugu_rubripes
ENSPPYG00000002819	A1CF	100	74.146	ENSTNIG00000003580	a1cf	100	74.146	Tetraodon_nigroviridis
ENSPPYG00000002819	A1CF	97	89.631	ENSTTRG00000013190	A1CF	95	89.631	Tursiops_truncatus
ENSPPYG00000002819	A1CF	100	96.082	ENSUAMG00000020065	A1CF	100	96.082	Ursus_americanus
ENSPPYG00000002819	A1CF	100	93.950	ENSUMAG00000011162	A1CF	100	94.118	Ursus_maritimus
ENSPPYG00000002819	A1CF	87	91.423	ENSVPAG00000006130	A1CF	86	91.423	Vicugna_pacos
ENSPPYG00000002819	A1CF	100	95.911	ENSVVUG00000002504	A1CF	100	95.911	Vulpes_vulpes
ENSPPYG00000002819	A1CF	100	77.833	ENSXETG00000006611	a1cf	100	77.667	Xenopus_tropicalis
ENSPPYG00000002819	A1CF	100	77.575	ENSXCOG00000003302	a1cf	100	78.571	Xiphophorus_couchianus
ENSPPYG00000002819	A1CF	100	76.557	ENSXMAG00000016703	a1cf	100	77.541	Xiphophorus_maculatus