EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPPYG00000003193 (Gene tree)
Gene ID: -
Gene Symbol: DDB1
Alias: -
Full Name: damage specific DNA binding protein 1
Gene Type: protein_coding
Species: Pongo_abelii
Status: putative
Strand: Plus strand
Length: 34616 bases
Position: chr11:15007211-15041826
Accession: 2717
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPPYP00000003683	CPSF_A	PF03178.15	2.4e-82	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPPYT00000003815	DDB1-201	4896	-	ENSPPYP00000003683	1135 (aa)	-	H2ND86

Gene Model

Click here to download ENSPPYG00000003193's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPPYG00000003193's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPPYG00000003193	DDB1	100	95.026	ENSG00000167986	DDB1	100	100.000	Homo_sapiens
ENSPPYG00000003193	DDB1	98	87.131	ENSAPOG00000005036	ddb1	99	87.373	Acanthochromis_polyacanthus
ENSPPYG00000003193	DDB1	100	94.939	ENSAMEG00000016518	DDB1	100	94.939	Ailuropoda_melanoleuca
ENSPPYG00000003193	DDB1	86	87.576	ENSACIG00000020624	ddb1	99	87.576	Amphilophus_citrinellus
ENSPPYG00000003193	DDB1	100	86.911	ENSAOCG00000003066	ddb1	100	86.911	Amphiprion_ocellaris
ENSPPYG00000003193	DDB1	100	86.998	ENSAPEG00000000092	ddb1	100	86.998	Amphiprion_percula
ENSPPYG00000003193	DDB1	94	86.969	ENSATEG00000020571	ddb1	98	86.969	Anabas_testudineus
ENSPPYG00000003193	DDB1	98	91.858	ENSAPLG00000007174	DDB1	99	91.858	Anas_platyrhynchos
ENSPPYG00000003193	DDB1	100	92.321	ENSACAG00000017758	DDB1	100	92.321	Anolis_carolinensis
ENSPPYG00000003193	DDB1	100	95.026	ENSANAG00000021878	DDB1	100	95.026	Aotus_nancymaae
ENSPPYG00000003193	DDB1	100	87.086	ENSACLG00000012401	ddb1	100	87.086	Astatotilapia_calliptera
ENSPPYG00000003193	DDB1	100	94.852	ENSBTAG00000021569	DDB1	93	94.852	Bos_taurus
ENSPPYG00000003193	DDB1	100	36.488	WBGene00010890	ddb-1	100	36.488	Caenorhabditis_elegans
ENSPPYG00000003193	DDB1	100	95.026	ENSCJAG00000019319	DDB1	100	95.026	Callithrix_jacchus
ENSPPYG00000003193	DDB1	100	94.939	ENSCAFG00000016264	DDB1	100	94.939	Canis_familiaris
ENSPPYG00000003193	DDB1	94	94.708	ENSCAFG00020012722	DDB1	99	94.708	Canis_lupus_dingo
ENSPPYG00000003193	DDB1	100	94.852	ENSCHIG00000014969	DDB1	100	94.852	Capra_hircus
ENSPPYG00000003193	DDB1	100	94.241	ENSTSYG00000008027	DDB1	100	94.241	Carlito_syrichta
ENSPPYG00000003193	DDB1	98	94.133	ENSCAPG00000010786	DDB1	100	94.133	Cavia_aperea
ENSPPYG00000003193	DDB1	100	94.241	ENSCPOG00000009956	DDB1	100	94.241	Cavia_porcellus
ENSPPYG00000003193	DDB1	100	95.026	ENSCCAG00000035883	DDB1	100	95.026	Cebus_capucinus
ENSPPYG00000003193	DDB1	100	92.660	ENSCATG00000044495	DDB1	100	92.660	Cercocebus_atys
ENSPPYG00000003193	DDB1	100	94.328	ENSCLAG00000004126	DDB1	100	94.328	Chinchilla_lanigera
ENSPPYG00000003193	DDB1	100	95.026	ENSCSAG00000006392	DDB1	100	95.026	Chlorocebus_sabaeus
ENSPPYG00000003193	DDB1	88	87.054	ENSCHOG00000011377	DDB1	89	87.054	Choloepus_hoffmanni
ENSPPYG00000003193	DDB1	100	92.845	ENSCPBG00000017728	DDB1	100	92.845	Chrysemys_picta_bellii
ENSPPYG00000003193	DDB1	100	59.585	ENSCING00000007437	-	100	59.585	Ciona_intestinalis
ENSPPYG00000003193	DDB1	94	57.890	ENSCSAVG00000004783	-	100	57.890	Ciona_savignyi
ENSPPYG00000003193	DDB1	100	95.026	ENSCANG00000019948	DDB1	100	95.026	Colobus_angolensis_palliatus
ENSPPYG00000003193	DDB1	100	94.852	ENSCGRG00001016599	Ddb1	100	94.852	Cricetulus_griseus_chok1gshd
ENSPPYG00000003193	DDB1	100	94.852	ENSCGRG00000013427	Ddb1	100	94.852	Cricetulus_griseus_crigri
ENSPPYG00000003193	DDB1	93	87.582	ENSCSEG00000012499	ddb1	99	85.758	Cynoglossus_semilaevis
ENSPPYG00000003193	DDB1	93	87.640	ENSCVAG00000019531	ddb1	99	87.640	Cyprinodon_variegatus
ENSPPYG00000003193	DDB1	100	84.635	ENSDARG00000074431	ddb1	100	84.535	Danio_rerio
ENSPPYG00000003193	DDB1	94	94.177	ENSDNOG00000014884	DDB1	98	94.177	Dasypus_novemcinctus
ENSPPYG00000003193	DDB1	84	100.000	ENSDORG00000000127	Ddb1	100	100.000	Dipodomys_ordii
ENSPPYG00000003193	DDB1	100	58.818	FBgn0260962	pic	100	58.818	Drosophila_melanogaster
ENSPPYG00000003193	DDB1	71	100.000	ENSETEG00000001053	-	71	100.000	Echinops_telfairi
ENSPPYG00000003193	DDB1	78	80.584	ENSEBUG00000014593	ddb1	97	80.584	Eptatretus_burgeri
ENSPPYG00000003193	DDB1	100	94.764	ENSEASG00005008184	DDB1	100	94.764	Equus_asinus_asinus
ENSPPYG00000003193	DDB1	100	94.677	ENSECAG00000012136	DDB1	100	94.677	Equus_caballus
ENSPPYG00000003193	DDB1	85	91.765	ENSEEUG00000003194	DDB1	85	91.765	Erinaceus_europaeus
ENSPPYG00000003193	DDB1	100	86.900	ENSELUG00000023868	ddb1	100	86.900	Esox_lucius
ENSPPYG00000003193	DDB1	100	94.939	ENSFCAG00000029716	DDB1	100	94.939	Felis_catus
ENSPPYG00000003193	DDB1	100	92.408	ENSFALG00000011981	DDB1	100	92.408	Ficedula_albicollis
ENSPPYG00000003193	DDB1	100	94.241	ENSFDAG00000005128	DDB1	100	94.241	Fukomys_damarensis
ENSPPYG00000003193	DDB1	90	88.031	ENSFHEG00000022133	ddb1	99	88.031	Fundulus_heteroclitus
ENSPPYG00000003193	DDB1	78	94.649	ENSGMOG00000019386	ddb1	93	94.649	Gadus_morhua
ENSPPYG00000003193	DDB1	100	92.227	ENSGALG00000042333	DDB1	100	92.227	Gallus_gallus
ENSPPYG00000003193	DDB1	93	87.453	ENSGAFG00000013142	ddb1	99	87.453	Gambusia_affinis
ENSPPYG00000003193	DDB1	96	86.144	ENSGACG00000017182	ddb1	100	86.144	Gasterosteus_aculeatus
ENSPPYG00000003193	DDB1	95	92.569	ENSGAGG00000014124	DDB1	100	92.569	Gopherus_agassizii
ENSPPYG00000003193	DDB1	100	95.026	ENSGGOG00000004052	DDB1	100	95.026	Gorilla_gorilla
ENSPPYG00000003193	DDB1	100	87.086	ENSHBUG00000008873	ddb1	100	87.086	Haplochromis_burtoni
ENSPPYG00000003193	DDB1	100	94.154	ENSHGLG00000018430	DDB1	100	94.154	Heterocephalus_glaber_female
ENSPPYG00000003193	DDB1	100	93.106	ENSHGLG00100014475	DDB1	100	93.106	Heterocephalus_glaber_male
ENSPPYG00000003193	DDB1	93	87.266	ENSHCOG00000018670	ddb1	98	87.266	Hippocampus_comes
ENSPPYG00000003193	DDB1	100	86.038	ENSIPUG00000005612	DDB1	100	86.038	Ictalurus_punctatus
ENSPPYG00000003193	DDB1	100	94.852	ENSSTOG00000007552	DDB1	100	94.852	Ictidomys_tridecemlineatus
ENSPPYG00000003193	DDB1	100	94.764	ENSJJAG00000017769	Ddb1	100	94.764	Jaculus_jaculus
ENSPPYG00000003193	DDB1	93	87.547	ENSKMAG00000002315	ddb1	99	87.547	Kryptolebias_marmoratus
ENSPPYG00000003193	DDB1	84	87.073	ENSLBEG00000017065	ddb1	99	87.073	Labrus_bergylta
ENSPPYG00000003193	DDB1	100	89.276	ENSLACG00000017611	DDB1	100	89.276	Latimeria_chalumnae
ENSPPYG00000003193	DDB1	92	83.333	ENSLOCG00000000012	ddb1	100	83.333	Lepisosteus_oculatus
ENSPPYG00000003193	DDB1	100	94.677	ENSLAFG00000011513	DDB1	100	94.677	Loxodonta_africana
ENSPPYG00000003193	DDB1	100	95.026	ENSMFAG00000042035	DDB1	100	95.026	Macaca_fascicularis
ENSPPYG00000003193	DDB1	99	94.987	ENSMMUG00000002691	DDB1	99	94.987	Macaca_mulatta
ENSPPYG00000003193	DDB1	100	95.026	ENSMNEG00000031559	DDB1	100	95.026	Macaca_nemestrina
ENSPPYG00000003193	DDB1	100	95.026	ENSMLEG00000044136	DDB1	100	95.026	Mandrillus_leucophaeus
ENSPPYG00000003193	DDB1	100	87.086	ENSMAMG00000014372	ddb1	100	87.086	Mastacembelus_armatus
ENSPPYG00000003193	DDB1	100	86.998	ENSMZEG00005013835	ddb1	100	86.998	Maylandia_zebra
ENSPPYG00000003193	DDB1	94	91.659	ENSMGAG00000004990	DDB1	100	91.659	Meleagris_gallopavo
ENSPPYG00000003193	DDB1	100	94.852	ENSMAUG00000012926	Ddb1	100	94.852	Mesocricetus_auratus
ENSPPYG00000003193	DDB1	100	94.852	ENSMICG00000013703	DDB1	100	94.852	Microcebus_murinus
ENSPPYG00000003193	DDB1	100	94.590	ENSMOCG00000020499	Ddb1	100	94.590	Microtus_ochrogaster
ENSPPYG00000003193	DDB1	86	87.475	ENSMMOG00000001758	ddb1	99	87.475	Mola_mola
ENSPPYG00000003193	DDB1	100	85.147	ENSMODG00000020353	DDB1	100	85.147	Monodelphis_domestica
ENSPPYG00000003193	DDB1	100	87.162	ENSMALG00000014071	ddb1	100	87.162	Monopterus_albus
ENSPPYG00000003193	DDB1	100	94.764	MGP_CAROLIEiJ_G0022695	Ddb1	100	94.764	Mus_caroli
ENSPPYG00000003193	DDB1	100	94.677	ENSMUSG00000024740	Ddb1	100	94.677	Mus_musculus
ENSPPYG00000003193	DDB1	100	94.764	MGP_PahariEiJ_G0014189	Ddb1	100	94.764	Mus_pahari
ENSPPYG00000003193	DDB1	100	94.764	MGP_SPRETEiJ_G0023609	Ddb1	100	94.764	Mus_spretus
ENSPPYG00000003193	DDB1	100	92.234	ENSMPUG00000014200	DDB1	100	92.234	Mustela_putorius_furo
ENSPPYG00000003193	DDB1	100	94.328	ENSMLUG00000013232	DDB1	100	94.328	Myotis_lucifugus
ENSPPYG00000003193	DDB1	100	94.415	ENSNGAG00000009384	Ddb1	100	94.415	Nannospalax_galili
ENSPPYG00000003193	DDB1	100	87.173	ENSNBRG00000019581	ddb1	100	87.173	Neolamprologus_brichardi
ENSPPYG00000003193	DDB1	100	92.055	ENSNLEG00000002022	DDB1	100	92.055	Nomascus_leucogenys
ENSPPYG00000003193	DDB1	90	96.875	ENSMEUG00000001099	DDB1	93	96.875	Notamacropus_eugenii
ENSPPYG00000003193	DDB1	90	85.632	ENSOPRG00000008254	DDB1	90	85.632	Ochotona_princeps
ENSPPYG00000003193	DDB1	100	94.241	ENSODEG00000002419	DDB1	100	94.241	Octodon_degus
ENSPPYG00000003193	DDB1	100	87.086	ENSONIG00000005804	ddb1	100	87.086	Oreochromis_niloticus
ENSPPYG00000003193	DDB1	90	92.775	ENSOANG00000004897	DDB1	100	92.775	Ornithorhynchus_anatinus
ENSPPYG00000003193	DDB1	100	95.026	ENSOCUG00000001667	DDB1	100	95.026	Oryctolagus_cuniculus
ENSPPYG00000003193	DDB1	95	85.740	ENSORLG00000001399	ddb1	98	87.057	Oryzias_latipes
ENSPPYG00000003193	DDB1	95	85.649	ENSORLG00020001277	ddb1	97	85.649	Oryzias_latipes_hni
ENSPPYG00000003193	DDB1	94	86.642	ENSORLG00015002080	ddb1	99	86.642	Oryzias_latipes_hsok
ENSPPYG00000003193	DDB1	93	87.640	ENSOMEG00000006181	ddb1	96	87.640	Oryzias_melastigma
ENSPPYG00000003193	DDB1	100	94.764	ENSOGAG00000016103	DDB1	100	94.764	Otolemur_garnettii
ENSPPYG00000003193	DDB1	99	94.774	ENSOARG00000011716	DDB1	98	94.774	Ovis_aries
ENSPPYG00000003193	DDB1	100	95.026	ENSPPAG00000035343	DDB1	100	95.026	Pan_paniscus
ENSPPYG00000003193	DDB1	100	94.939	ENSPPRG00000013300	DDB1	100	94.939	Panthera_pardus
ENSPPYG00000003193	DDB1	98	94.844	ENSPTIG00000006909	DDB1	98	94.844	Panthera_tigris_altaica
ENSPPYG00000003193	DDB1	100	95.026	ENSPTRG00000003737	DDB1	100	95.026	Pan_troglodytes
ENSPPYG00000003193	DDB1	100	95.026	ENSPANG00000000242	DDB1	100	95.026	Papio_anubis
ENSPPYG00000003193	DDB1	93	87.652	ENSPKIG00000019213	ddb1	93	87.652	Paramormyrops_kingsleyae
ENSPPYG00000003193	DDB1	98	92.124	ENSPSIG00000013275	DDB1	100	92.124	Pelodiscus_sinensis
ENSPPYG00000003193	DDB1	86	87.169	ENSPMGG00000021179	ddb1	99	87.169	Periophthalmus_magnuspinnatus
ENSPPYG00000003193	DDB1	100	94.852	ENSPEMG00000012241	Ddb1	100	94.852	Peromyscus_maniculatus_bairdii
ENSPPYG00000003193	DDB1	89	82.745	ENSPMAG00000008479	ddb1	100	82.745	Petromyzon_marinus
ENSPPYG00000003193	DDB1	100	94.154	ENSPCIG00000002643	DDB1	100	94.154	Phascolarctos_cinereus
ENSPPYG00000003193	DDB1	100	86.736	ENSPFOG00000002768	ddb1	100	86.736	Poecilia_formosa
ENSPPYG00000003193	DDB1	100	86.649	ENSPLAG00000017227	ddb1	100	86.649	Poecilia_latipinna
ENSPPYG00000003193	DDB1	100	86.649	ENSPMEG00000011398	ddb1	100	86.649	Poecilia_mexicana
ENSPPYG00000003193	DDB1	94	87.094	ENSPREG00000004440	ddb1	98	87.094	Poecilia_reticulata
ENSPPYG00000003193	DDB1	85	92.308	ENSPCAG00000011040	DDB1	85	92.308	Procavia_capensis
ENSPPYG00000003193	DDB1	100	93.380	ENSPCOG00000015176	DDB1	100	93.380	Propithecus_coquereli
ENSPPYG00000003193	DDB1	100	94.764	ENSPVAG00000003847	DDB1	100	94.764	Pteropus_vampyrus
ENSPPYG00000003193	DDB1	93	87.453	ENSPNAG00000006635	ddb1	96	87.453	Pygocentrus_nattereri
ENSPPYG00000003193	DDB1	100	94.764	ENSRNOG00000020715	Ddb1	100	94.764	Rattus_norvegicus
ENSPPYG00000003193	DDB1	100	95.026	ENSRBIG00000033611	DDB1	100	95.026	Rhinopithecus_bieti
ENSPPYG00000003193	DDB1	100	95.026	ENSRROG00000041407	DDB1	100	95.026	Rhinopithecus_roxellana
ENSPPYG00000003193	DDB1	100	94.939	ENSSBOG00000019775	DDB1	100	94.939	Saimiri_boliviensis_boliviensis
ENSPPYG00000003193	DDB1	94	91.914	ENSSHAG00000011600	DDB1	100	91.914	Sarcophilus_harrisii
ENSPPYG00000003193	DDB1	94	87.268	ENSSFOG00015011151	ddb1	97	87.268	Scleropages_formosus
ENSPPYG00000003193	DDB1	100	86.736	ENSSMAG00000009495	ddb1	100	86.736	Scophthalmus_maximus
ENSPPYG00000003193	DDB1	100	87.086	ENSSDUG00000004642	ddb1	100	87.086	Seriola_dumerili
ENSPPYG00000003193	DDB1	100	87.086	ENSSLDG00000015804	ddb1	100	87.086	Seriola_lalandi_dorsalis
ENSPPYG00000003193	DDB1	70	100.000	ENSSARG00000003290	-	72	100.000	Sorex_araneus
ENSPPYG00000003193	DDB1	100	93.019	ENSSPUG00000019338	DDB1	100	93.019	Sphenodon_punctatus
ENSPPYG00000003193	DDB1	94	87.465	ENSSPAG00000009888	ddb1	99	87.465	Stegastes_partitus
ENSPPYG00000003193	DDB1	100	93.979	ENSSSCG00000013094	DDB1	100	93.979	Sus_scrofa
ENSPPYG00000003193	DDB1	100	92.757	ENSTGUG00000006414	DDB1	100	92.757	Taeniopygia_guttata
ENSPPYG00000003193	DDB1	93	86.610	ENSTRUG00000016682	ddb1	98	86.610	Takifugu_rubripes
ENSPPYG00000003193	DDB1	88	80.456	ENSTNIG00000009565	ddb1	99	80.456	Tetraodon_nigroviridis
ENSPPYG00000003193	DDB1	92	88.601	ENSTTRG00000011055	DDB1	94	88.601	Tursiops_truncatus
ENSPPYG00000003193	DDB1	94	94.708	ENSUAMG00000017793	DDB1	93	94.708	Ursus_americanus
ENSPPYG00000003193	DDB1	94	94.708	ENSUMAG00000011788	DDB1	98	94.708	Ursus_maritimus
ENSPPYG00000003193	DDB1	90	92.453	ENSVPAG00000007963	DDB1	92	92.453	Vicugna_pacos
ENSPPYG00000003193	DDB1	100	94.852	ENSVVUG00000004987	DDB1	100	94.852	Vulpes_vulpes
ENSPPYG00000003193	DDB1	100	88.870	ENSXETG00000008820	ddb1	100	88.870	Xenopus_tropicalis
ENSPPYG00000003193	DDB1	86	87.067	ENSXCOG00000013956	ddb1	99	87.067	Xiphophorus_couchianus
ENSPPYG00000003193	DDB1	93	87.453	ENSXMAG00000000022	ddb1	99	87.453	Xiphophorus_maculatus