EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Orthologs
Description
Ensembl ID
ENSPPYG00000003230 (Gene tree)
Gene ID
100173027
Gene Symbol
PATL1
Alias
FLJ36874|Pat1b
Full Name
PAT1 homolog 1%2C processing body mRNA decay factor
Gene Type
protein_coding
Species
Pongo_abelii
Status
putative
Strand
Plus strand
Length
32021 bases
Position
chr11:16867279-16899299
Accession
26721
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSPPYP00000003720PAT1PF09770.96.1e-1911
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSPPYT00000003853PATL1-2014217-ENSPPYP00000003720770 (aa)-H2NDC2
Gene Model
Click here to download ENSPPYG00000003230's gene model file
Pathways
Pathway IDPathway NameSource
pon03018RNA degradationKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSPPYG00000003230's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSPPYG00000003230PATL16334.623ENSG00000229474PATL29937.088Homo_sapiens
ENSPPYG00000003230PATL110099.221ENSG00000166889PATL110099.221Homo_sapiens
ENSPPYG00000003230PATL16834.991ENSAPOG00000022988patl27333.395Acanthochromis_polyacanthus
ENSPPYG00000003230PATL15453.237ENSAPOG00000021290patl19845.990Acanthochromis_polyacanthus
ENSPPYG00000003230PATL110096.628ENSAMEG00000014215PATL110096.628Ailuropoda_melanoleuca
ENSPPYG00000003230PATL16234.362ENSAMEG00000014997PATL27534.951Ailuropoda_melanoleuca
ENSPPYG00000003230PATL19645.758ENSACIG00000005182patl19946.144Amphilophus_citrinellus
ENSPPYG00000003230PATL18731.711ENSAOCG00000023738patl25335.227Amphiprion_ocellaris
ENSPPYG00000003230PATL16265.000ENSAPEG00000021391patl18159.722Amphiprion_percula
ENSPPYG00000003230PATL16634.302ENSAPEG00000011299patl26434.633Amphiprion_percula
ENSPPYG00000003230PATL19163.333ENSATEG00000002230patl18066.667Anabas_testudineus
ENSPPYG00000003230PATL16434.387ENSATEG00000019567patl27033.728Anabas_testudineus
ENSPPYG00000003230PATL17170.471ENSAPLG00000013394PATL19970.492Anas_platyrhynchos
ENSPPYG00000003230PATL15339.225ENSAPLG00000003980PATL26439.225Anas_platyrhynchos
ENSPPYG00000003230PATL19980.026ENSACAG00000006607PATL19979.248Anolis_carolinensis
ENSPPYG00000003230PATL110099.091ENSANAG00000023078PATL110099.091Aotus_nancymaae
ENSPPYG00000003230PATL18731.462ENSACLG00000010326patl25436.667Astatotilapia_calliptera
ENSPPYG00000003230PATL16266.667ENSACLG00000005144patl18450.000Astatotilapia_calliptera
ENSPPYG00000003230PATL19941.430ENSAMXG00000010731patl19946.287Astyanax_mexicanus
ENSPPYG00000003230PATL17535.144ENSAMXG00000020293patl26335.639Astyanax_mexicanus
ENSPPYG00000003230PATL110096.498ENSBTAG00000005913PATL110096.498Bos_taurus
ENSPPYG00000003230PATL110099.091ENSCJAG00000016192PATL110099.091Callithrix_jacchus
ENSPPYG00000003230PATL16335.102ENSCJAG00000002379PATL27236.957Callithrix_jacchus
ENSPPYG00000003230PATL110097.406ENSCAFG00000007581PATL110097.406Canis_familiaris
ENSPPYG00000003230PATL16434.524ENSCAFG00000013629PATL27236.232Canis_familiaris
ENSPPYG00000003230PATL19997.386ENSCAFG00020001648PATL110097.386Canis_lupus_dingo
ENSPPYG00000003230PATL16434.524ENSCAFG00020022169PATL27236.232Canis_lupus_dingo
ENSPPYG00000003230PATL110094.812ENSCHIG00000025913PATL110094.812Capra_hircus
ENSPPYG00000003230PATL16237.037ENSCHIG00000026665PATL27438.061Capra_hircus
ENSPPYG00000003230PATL19997.392ENSTSYG00000012748PATL19697.392Carlito_syrichta
ENSPPYG00000003230PATL110091.192ENSCAPG00000013668PATL19991.192Cavia_aperea
ENSPPYG00000003230PATL110089.494ENSCPOG00000006827PATL110089.620Cavia_porcellus
ENSPPYG00000003230PATL110099.351ENSCCAG00000023759PATL110099.351Cebus_capucinus
ENSPPYG00000003230PATL110099.351ENSCATG00000009629PATL110099.351Cercocebus_atys
ENSPPYG00000003230PATL15734.598ENSCLAG00000014407PATL27335.714Chinchilla_lanigera
ENSPPYG00000003230PATL19992.549ENSCLAG00000003427PATL110092.549Chinchilla_lanigera
ENSPPYG00000003230PATL19099.281ENSCSAG00000006095PATL110099.281Chlorocebus_sabaeus
ENSPPYG00000003230PATL16896.970ENSCHOG00000001611PATL18496.970Choloepus_hoffmanni
ENSPPYG00000003230PATL15340.049ENSCPBG00000006150PATL25939.467Chrysemys_picta_bellii
ENSPPYG00000003230PATL17930.469ENSCING00000021535-10030.079Ciona_intestinalis
ENSPPYG00000003230PATL16334.490ENSCANG00000013856PATL27436.534Colobus_angolensis_palliatus
ENSPPYG00000003230PATL19999.480ENSCANG00000039197PATL19999.480Colobus_angolensis_palliatus
ENSPPYG00000003230PATL110097.013ENSCGRG00001024927Patl110097.013Cricetulus_griseus_chok1gshd
ENSPPYG00000003230PATL110096.498ENSCGRG00000000461Patl110096.993Cricetulus_griseus_crigri
ENSPPYG00000003230PATL19265.000ENSCSEG00000008261patl18253.488Cynoglossus_semilaevis
ENSPPYG00000003230PATL16234.576ENSCSEG00000009438patl25934.554Cynoglossus_semilaevis
ENSPPYG00000003230PATL15431.713ENSCVAG00000016203patl26331.264Cyprinodon_variegatus
ENSPPYG00000003230PATL18952.038ENSCVAG00000006664patl110046.641Cyprinodon_variegatus
ENSPPYG00000003230PATL16735.849ENSDARG00000089567patl26435.516Danio_rerio
ENSPPYG00000003230PATL19946.966ENSDARG00000017423patl110046.368Danio_rerio
ENSPPYG00000003230PATL19990.078ENSDNOG00000038865PATL110095.833Dasypus_novemcinctus
ENSPPYG00000003230PATL15136.829ENSDORG00000026649Patl27235.806Dipodomys_ordii
ENSPPYG00000003230PATL110096.753ENSDORG00000000237Patl110096.753Dipodomys_ordii
ENSPPYG00000003230PATL110097.150ENSEASG00005007963PATL110097.150Equus_asinus_asinus
ENSPPYG00000003230PATL110097.021ENSECAG00000011411PATL110097.021Equus_caballus
ENSPPYG00000003230PATL16934.206ENSELUG00000023244patl25436.124Esox_lucius
ENSPPYG00000003230PATL18961.017ENSELUG00000024249patl19945.540Esox_lucius
ENSPPYG00000003230PATL110096.883ENSFCAG00000015573PATL110096.883Felis_catus
ENSPPYG00000003230PATL16234.623ENSFCAG00000027170PATL27335.266Felis_catus
ENSPPYG00000003230PATL19980.965ENSFALG00000012150PATL19979.896Ficedula_albicollis
ENSPPYG00000003230PATL19632.446ENSFALG00000009768PATL25538.983Ficedula_albicollis
ENSPPYG00000003230PATL15134.422ENSFDAG00000012242PATL27335.930Fukomys_damarensis
ENSPPYG00000003230PATL19992.157ENSFDAG00000016128PATL110091.895Fukomys_damarensis
ENSPPYG00000003230PATL16266.667ENSFHEG00000017790patl18358.333Fundulus_heteroclitus
ENSPPYG00000003230PATL16132.720ENSGMOG00000005666patl29934.524Gadus_morhua
ENSPPYG00000003230PATL19978.431ENSGALG00000042641PATL110078.301Gallus_gallus
ENSPPYG00000003230PATL16458.904ENSGAFG00000006508patl18458.904Gambusia_affinis
ENSPPYG00000003230PATL18632.090ENSGAFG00000019344patl25536.715Gambusia_affinis
ENSPPYG00000003230PATL19948.072ENSGACG00000016448patl19949.170Gasterosteus_aculeatus
ENSPPYG00000003230PATL110083.829ENSGAGG00000004461PATL110084.384Gopherus_agassizii
ENSPPYG00000003230PATL110099.221ENSGGOG00000004335PATL110099.221Gorilla_gorilla
ENSPPYG00000003230PATL16334.827ENSGGOG00000025923PATL27436.534Gorilla_gorilla
ENSPPYG00000003230PATL16266.667ENSHBUG00000005365patl18450.000Haplochromis_burtoni
ENSPPYG00000003230PATL16234.917ENSHBUG00000005929patl26136.516Haplochromis_burtoni
ENSPPYG00000003230PATL110093.377ENSHGLG00000018173PATL110093.377Heterocephalus_glaber_female
ENSPPYG00000003230PATL19991.895ENSHGLG00100003453PATL110091.895Heterocephalus_glaber_male
ENSPPYG00000003230PATL19930.473ENSHCOG00000016754patl25634.411Hippocampus_comes
ENSPPYG00000003230PATL19265.000ENSHCOG00000001898patl18254.430Hippocampus_comes
ENSPPYG00000003230PATL16733.962ENSIPUG00000020692patl25635.971Ictalurus_punctatus
ENSPPYG00000003230PATL19897.757ENSSTOG00000013764PATL19997.757Ictidomys_tridecemlineatus
ENSPPYG00000003230PATL15437.831ENSSTOG00000033848PATL27237.108Ictidomys_tridecemlineatus
ENSPPYG00000003230PATL19996.597ENSJJAG00000010135Patl110096.597Jaculus_jaculus
ENSPPYG00000003230PATL16260.000ENSKMAG00000020848patl18255.556Kryptolebias_marmoratus
ENSPPYG00000003230PATL16135.639ENSLBEG00000022344patl25535.945Labrus_bergylta
ENSPPYG00000003230PATL19268.333ENSLBEG00000023617patl18158.025Labrus_bergylta
ENSPPYG00000003230PATL19830.572ENSLACG00000005291-9730.377Latimeria_chalumnae
ENSPPYG00000003230PATL19857.217ENSLACG00000004640PATL19956.939Latimeria_chalumnae
ENSPPYG00000003230PATL19947.273ENSLOCG00000000717patl19947.763Lepisosteus_oculatus
ENSPPYG00000003230PATL15138.107ENSLAFG00000031124PATL27137.340Loxodonta_africana
ENSPPYG00000003230PATL110096.887ENSLAFG00000015161PATL110096.887Loxodonta_africana
ENSPPYG00000003230PATL110099.351ENSMFAG00000040851PATL110099.351Macaca_fascicularis
ENSPPYG00000003230PATL110099.351ENSMMUG00000017287PATL110099.351Macaca_mulatta
ENSPPYG00000003230PATL110099.351ENSMNEG00000038692PATL110099.351Macaca_nemestrina
ENSPPYG00000003230PATL110099.221ENSMLEG00000030044PATL110099.221Mandrillus_leucophaeus
ENSPPYG00000003230PATL16134.746ENSMAMG00000013327patl26135.308Mastacembelus_armatus
ENSPPYG00000003230PATL19261.290ENSMAMG00000003950patl19846.891Mastacembelus_armatus
ENSPPYG00000003230PATL18731.462ENSMZEG00005014292patl25436.667Maylandia_zebra
ENSPPYG00000003230PATL16266.667ENSMZEG00005013404patl18450.000Maylandia_zebra
ENSPPYG00000003230PATL19277.793ENSMGAG00000003406PATL19976.783Meleagris_gallopavo
ENSPPYG00000003230PATL18596.933ENSMAUG00000012059Patl19696.933Mesocricetus_auratus
ENSPPYG00000003230PATL19994.394ENSMICG00000004172PATL19899.209Microcebus_murinus
ENSPPYG00000003230PATL15236.567ENSMOCG00000015367Patl27235.910Microtus_ochrogaster
ENSPPYG00000003230PATL110096.883ENSMOCG00000010087Patl110096.883Microtus_ochrogaster
ENSPPYG00000003230PATL19946.005ENSMMOG00000013711patl110045.573Mola_mola
ENSPPYG00000003230PATL16231.027ENSMMOG00000001299patl26031.579Mola_mola
ENSPPYG00000003230PATL16236.179ENSMODG00000017690PATL27135.981Monodelphis_domestica
ENSPPYG00000003230PATL110088.601ENSMODG00000020201PATL110087.953Monodelphis_domestica
ENSPPYG00000003230PATL19439.386ENSMALG00000018706patl19755.764Monopterus_albus
ENSPPYG00000003230PATL16233.194ENSMALG00000008131patl25234.368Monopterus_albus
ENSPPYG00000003230PATL110096.883MGP_CAROLIEiJ_G0022739Patl110096.883Mus_caroli
ENSPPYG00000003230PATL110097.013ENSMUSG00000046139Patl110097.013Mus_musculus
ENSPPYG00000003230PATL110096.753MGP_PahariEiJ_G0014233Patl110096.753Mus_pahari
ENSPPYG00000003230PATL110097.143MGP_SPRETEiJ_G0023652Patl110097.143Mus_spretus
ENSPPYG00000003230PATL110097.276ENSMPUG00000014607PATL110097.276Mustela_putorius_furo
ENSPPYG00000003230PATL110094.423ENSMLUG00000011169PATL110094.423Myotis_lucifugus
ENSPPYG00000003230PATL110096.899ENSNGAG00000003682Patl110096.899Nannospalax_galili
ENSPPYG00000003230PATL16234.711ENSNBRG00000011745patl25836.277Neolamprologus_brichardi
ENSPPYG00000003230PATL19995.942ENSNLEG00000013081PATL110095.942Nomascus_leucogenys
ENSPPYG00000003230PATL16334.969ENSNLEG00000005673PATL27535.797Nomascus_leucogenys
ENSPPYG00000003230PATL16490.968ENSMEUG00000009391PATL17590.968Notamacropus_eugenii
ENSPPYG00000003230PATL16896.032ENSOPRG00000007963PATL17996.032Ochotona_princeps
ENSPPYG00000003230PATL17390.837ENSODEG00000001792PATL19491.608Octodon_degus
ENSPPYG00000003230PATL18731.509ENSONIG00000011519patl25436.429Oreochromis_niloticus
ENSPPYG00000003230PATL16266.667ENSONIG00000004170patl110047.865Oreochromis_niloticus
ENSPPYG00000003230PATL15137.129ENSOANG00000001538-8437.897Ornithorhynchus_anatinus
ENSPPYG00000003230PATL15287.154ENSOANG00000011117-9687.500Ornithorhynchus_anatinus
ENSPPYG00000003230PATL16134.526ENSOCUG00000006339PATL27435.250Oryctolagus_cuniculus
ENSPPYG00000003230PATL110097.922ENSOCUG00000002156PATL110097.922Oryctolagus_cuniculus
ENSPPYG00000003230PATL16433.794ENSORLG00000005780patl26333.004Oryzias_latipes
ENSPPYG00000003230PATL16434.190ENSORLG00020016506patl26133.399Oryzias_latipes_hni
ENSPPYG00000003230PATL16433.992ENSORLG00015014500patl26333.202Oryzias_latipes_hsok
ENSPPYG00000003230PATL18731.525ENSOMEG00000021628patl25735.714Oryzias_melastigma
ENSPPYG00000003230PATL15833.843ENSOGAG00000004709PATL27235.000Otolemur_garnettii
ENSPPYG00000003230PATL110098.701ENSOGAG00000004351PATL110098.701Otolemur_garnettii
ENSPPYG00000003230PATL19995.039ENSOARG00000012005PATL19695.039Ovis_aries
ENSPPYG00000003230PATL16135.789ENSOARG00000003762PATL27237.010Ovis_aries
ENSPPYG00000003230PATL16334.959ENSPPAG00000007221PATL27335.797Pan_paniscus
ENSPPYG00000003230PATL110099.351ENSPPAG00000034275PATL110099.351Pan_paniscus
ENSPPYG00000003230PATL16234.694ENSPPRG00000004279PATL27335.024Panthera_pardus
ENSPPYG00000003230PATL19996.732ENSPPRG00000020639PATL110096.732Panthera_pardus
ENSPPYG00000003230PATL110096.753ENSPTIG00000019298PATL110096.753Panthera_tigris_altaica
ENSPPYG00000003230PATL16234.086ENSPTIG00000018964PATL27334.783Panthera_tigris_altaica
ENSPPYG00000003230PATL19990.445ENSPTRG00000003697PATL110090.445Pan_troglodytes
ENSPPYG00000003230PATL16334.623ENSPTRG00000041536PATL27336.300Pan_troglodytes
ENSPPYG00000003230PATL110099.351ENSPANG00000035620PATL110099.351Papio_anubis
ENSPPYG00000003230PATL19946.201ENSPKIG00000016224patl19947.426Paramormyrops_kingsleyae
ENSPPYG00000003230PATL110083.182ENSPSIG00000016206PATL19682.665Pelodiscus_sinensis
ENSPPYG00000003230PATL15437.116ENSPSIG00000017690PATL29537.101Pelodiscus_sinensis
ENSPPYG00000003230PATL18954.436ENSPMGG00000002644patl19945.388Periophthalmus_magnuspinnatus
ENSPPYG00000003230PATL15935.294ENSPMGG00000014550patl26335.849Periophthalmus_magnuspinnatus
ENSPPYG00000003230PATL16234.631ENSPEMG00000016509Patl27036.317Peromyscus_maniculatus_bairdii
ENSPPYG00000003230PATL110096.883ENSPEMG00000014215Patl110096.883Peromyscus_maniculatus_bairdii
ENSPPYG00000003230PATL16533.730ENSPCIG00000018256PATL27636.386Phascolarctos_cinereus
ENSPPYG00000003230PATL110088.860ENSPCIG00000010852PATL110088.212Phascolarctos_cinereus
ENSPPYG00000003230PATL110046.228ENSPFOG00000007768patl110046.826Poecilia_formosa
ENSPPYG00000003230PATL18632.496ENSPFOG00000007305patl25436.232Poecilia_formosa
ENSPPYG00000003230PATL19731.201ENSPLAG00000020713patl25436.232Poecilia_latipinna
ENSPPYG00000003230PATL15553.919ENSPLAG00000018465patl17650.379Poecilia_latipinna
ENSPPYG00000003230PATL18549.772ENSPMEG00000006555patl17650.228Poecilia_mexicana
ENSPPYG00000003230PATL19731.688ENSPMEG00000018942patl25436.232Poecilia_mexicana
ENSPPYG00000003230PATL18730.454ENSPREG00000023066patl25136.228Poecilia_reticulata
ENSPPYG00000003230PATL17447.644ENSPREG00000003874patl17049.913Poecilia_reticulata
ENSPPYG00000003230PATL15337.198ENSPCOG00000000295PATL29938.462Propithecus_coquereli
ENSPPYG00000003230PATL110098.182ENSPCOG00000020770PATL110098.182Propithecus_coquereli
ENSPPYG00000003230PATL18591.463ENSPVAG00000015239PATL110091.006Pteropus_vampyrus
ENSPPYG00000003230PATL16234.504ENSPNYG00000017381patl26135.952Pundamilia_nyererei
ENSPPYG00000003230PATL17853.172ENSPNYG00000018936patl19653.153Pundamilia_nyererei
ENSPPYG00000003230PATL18449.923ENSPNAG00000017907patl18462.295Pygocentrus_nattereri
ENSPPYG00000003230PATL16236.192ENSPNAG00000002315patl26335.146Pygocentrus_nattereri
ENSPPYG00000003230PATL110096.494ENSRNOG00000021052Patl110096.494Rattus_norvegicus
ENSPPYG00000003230PATL110088.696ENSRBIG00000032263PATL110088.696Rhinopithecus_bieti
ENSPPYG00000003230PATL110099.481ENSRROG00000032861PATL110099.481Rhinopithecus_roxellana
ENSPPYG00000003230PATL110099.221ENSSBOG00000025195PATL110099.221Saimiri_boliviensis_boliviensis
ENSPPYG00000003230PATL110089.406ENSSHAG00000004309PATL110088.760Sarcophilus_harrisii
ENSPPYG00000003230PATL19944.228ENSSFOG00015009614patl19945.988Scleropages_formosus
ENSPPYG00000003230PATL18633.873ENSSFOG00015000720patl25538.118Scleropages_formosus
ENSPPYG00000003230PATL16535.259ENSSMAG00000017262patl26335.835Scophthalmus_maximus
ENSPPYG00000003230PATL19454.321ENSSMAG00000009482patl18154.321Scophthalmus_maximus
ENSPPYG00000003230PATL16235.331ENSSDUG00000022927patl26034.369Seriola_dumerili
ENSPPYG00000003230PATL19268.333ENSSDUG00000005362patl17959.722Seriola_dumerili
ENSPPYG00000003230PATL16834.457ENSSLDG00000017922patl25937.260Seriola_lalandi_dorsalis
ENSPPYG00000003230PATL19266.667ENSSLDG00000019146patl17958.333Seriola_lalandi_dorsalis
ENSPPYG00000003230PATL15136.802ENSSARG00000009047PATL27636.041Sorex_araneus
ENSPPYG00000003230PATL18098.810ENSSARG00000009600PATL18098.810Sorex_araneus
ENSPPYG00000003230PATL110081.582ENSSPUG00000009453PATL110080.804Sphenodon_punctatus
ENSPPYG00000003230PATL16134.316ENSSPAG00000004784patl26235.446Stegastes_partitus
ENSPPYG00000003230PATL15453.237ENSSPAG00000003187patl19846.535Stegastes_partitus
ENSPPYG00000003230PATL110097.536ENSSSCG00000013124PATL110097.536Sus_scrofa
ENSPPYG00000003230PATL15238.025ENSTGUG00000004619-9838.916Taeniopygia_guttata
ENSPPYG00000003230PATL19980.649ENSTGUG00000006222PATL110079.584Taeniopygia_guttata
ENSPPYG00000003230PATL16234.656ENSTRUG00000005647patl25835.566Takifugu_rubripes
ENSPPYG00000003230PATL19453.165ENSTRUG00000000709patl19944.608Takifugu_rubripes
ENSPPYG00000003230PATL19096.270ENSTBEG00000000796PATL19096.270Tupaia_belangeri
ENSPPYG00000003230PATL17297.436ENSTTRG00000009389PATL18497.436Tursiops_truncatus
ENSPPYG00000003230PATL16234.356ENSUAMG00000018533PATL27135.024Ursus_americanus
ENSPPYG00000003230PATL16234.969ENSUMAG00000007738PATL27135.266Ursus_maritimus
ENSPPYG00000003230PATL19997.105ENSUMAG00000018634PATL110097.126Ursus_maritimus
ENSPPYG00000003230PATL16597.222ENSVPAG00000009224PATL17697.222Vicugna_pacos
ENSPPYG00000003230PATL16435.130ENSVVUG00000011576PATL27236.232Vulpes_vulpes
ENSPPYG00000003230PATL110096.887ENSVVUG00000016668PATL110097.126Vulpes_vulpes
ENSPPYG00000003230PATL15337.681ENSXETG00000014167patl27535.425Xenopus_tropicalis
ENSPPYG00000003230PATL17961.404ENSXCOG00000010808patl19861.404Xiphophorus_couchianus
ENSPPYG00000003230PATL16265.000ENSXMAG00000013834patl18456.164Xiphophorus_maculatus

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