EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPPYG00000004043 (Gene tree)
Gene ID: 100439758
Gene Symbol: RPUSD4
Alias: FLJ14494
Full Name: RNA pseudouridine synthase D4
Gene Type: protein_coding
Species: Pongo_abelii
Status: putative
Strand: Minus strand
Length: 10546 bases
Position: chr11:123257275-123267820
Accession: 100439758
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPPYP00000004622	PseudoU_synth_2	PF00849.22	7.8e-35	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPPYT00000004803	RPUSD4-201	3266	-	ENSPPYP00000004622	377 (aa)	XP_002822725	H2NFT7

Gene Model

Click here to download ENSPPYG00000004043's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPPYG00000004043's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPPYG00000004043	RPUSD4	71	30.070	ENSPPYG00000013676	RPUSD3	78	30.070

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPPYG00000004043	RPUSD4	100	97.878	ENSG00000165526	RPUSD4	100	97.878	Homo_sapiens
ENSPPYG00000004043	RPUSD4	89	50.585	ENSAPOG00000011024	rpusd4	86	50.585	Acanthochromis_polyacanthus
ENSPPYG00000004043	RPUSD4	62	81.452	ENSAMEG00000005953	-	100	81.452	Ailuropoda_melanoleuca
ENSPPYG00000004043	RPUSD4	100	82.228	ENSAMEG00000000127	-	100	82.228	Ailuropoda_melanoleuca
ENSPPYG00000004043	RPUSD4	86	49.544	ENSACIG00000003533	rpusd4	95	49.544	Amphilophus_citrinellus
ENSPPYG00000004043	RPUSD4	88	50.585	ENSAOCG00000015409	rpusd4	84	50.585	Amphiprion_ocellaris
ENSPPYG00000004043	RPUSD4	88	50.585	ENSAPEG00000018935	rpusd4	84	50.585	Amphiprion_percula
ENSPPYG00000004043	RPUSD4	87	49.699	ENSATEG00000008059	rpusd4	82	49.699	Anabas_testudineus
ENSPPYG00000004043	RPUSD4	73	61.649	ENSAPLG00000013250	RPUSD4	99	60.068	Anas_platyrhynchos
ENSPPYG00000004043	RPUSD4	88	64.865	ENSACAG00000000189	RPUSD4	91	64.865	Anolis_carolinensis
ENSPPYG00000004043	RPUSD4	99	89.785	ENSANAG00000024050	RPUSD4	100	89.785	Aotus_nancymaae
ENSPPYG00000004043	RPUSD4	89	49.853	ENSACLG00000020996	rpusd4	86	49.853	Astatotilapia_calliptera
ENSPPYG00000004043	RPUSD4	85	50.769	ENSAMXG00000031479	rpusd4	91	50.769	Astyanax_mexicanus
ENSPPYG00000004043	RPUSD4	100	79.101	ENSBTAG00000020900	RPUSD4	100	79.101	Bos_taurus
ENSPPYG00000004043	RPUSD4	98	90.270	ENSCJAG00000042850	RPUSD4	93	90.270	Callithrix_jacchus
ENSPPYG00000004043	RPUSD4	100	80.423	ENSCAFG00000010488	RPUSD4	100	80.423	Canis_familiaris
ENSPPYG00000004043	RPUSD4	100	80.423	ENSCAFG00020010621	RPUSD4	100	80.423	Canis_lupus_dingo
ENSPPYG00000004043	RPUSD4	100	78.892	ENSCHIG00000009975	RPUSD4	100	78.628	Capra_hircus
ENSPPYG00000004043	RPUSD4	100	86.737	ENSTSYG00000008456	RPUSD4	100	86.737	Carlito_syrichta
ENSPPYG00000004043	RPUSD4	68	79.845	ENSCAPG00000006040	RPUSD4	100	79.845	Cavia_aperea
ENSPPYG00000004043	RPUSD4	100	79.576	ENSCPOG00000014971	RPUSD4	100	79.576	Cavia_porcellus
ENSPPYG00000004043	RPUSD4	99	90.323	ENSCCAG00000027838	RPUSD4	100	90.323	Cebus_capucinus
ENSPPYG00000004043	RPUSD4	100	93.103	ENSCATG00000041570	RPUSD4	100	93.103	Cercocebus_atys
ENSPPYG00000004043	RPUSD4	100	83.554	ENSCLAG00000016553	RPUSD4	100	83.554	Chinchilla_lanigera
ENSPPYG00000004043	RPUSD4	100	92.308	ENSCSAG00000002274	RPUSD4	100	92.308	Chlorocebus_sabaeus
ENSPPYG00000004043	RPUSD4	75	83.039	ENSCHOG00000010249	RPUSD4	100	83.039	Choloepus_hoffmanni
ENSPPYG00000004043	RPUSD4	75	69.231	ENSCPBG00000011175	RPUSD4	99	69.231	Chrysemys_picta_bellii
ENSPPYG00000004043	RPUSD4	71	42.446	ENSCSAVG00000000872	-	54	42.446	Ciona_savignyi
ENSPPYG00000004043	RPUSD4	100	91.247	ENSCANG00000039684	RPUSD4	100	91.247	Colobus_angolensis_palliatus
ENSPPYG00000004043	RPUSD4	100	82.759	ENSCGRG00001024141	Rpusd4	100	82.759	Cricetulus_griseus_chok1gshd
ENSPPYG00000004043	RPUSD4	100	82.759	ENSCGRG00000014415	Rpusd4	100	82.759	Cricetulus_griseus_crigri
ENSPPYG00000004043	RPUSD4	89	48.857	ENSCVAG00000000392	rpusd4	99	48.857	Cyprinodon_variegatus
ENSPPYG00000004043	RPUSD4	87	49.699	ENSCVAG00000008761	rpusd4	88	48.563	Cyprinodon_variegatus
ENSPPYG00000004043	RPUSD4	90	47.674	ENSDARG00000012674	rpusd4	96	47.674	Danio_rerio
ENSPPYG00000004043	RPUSD4	100	77.454	ENSDNOG00000020026	RPUSD4	100	77.454	Dasypus_novemcinctus
ENSPPYG00000004043	RPUSD4	100	81.167	ENSDORG00000016717	Rpusd4	100	81.167	Dipodomys_ordii
ENSPPYG00000004043	RPUSD4	98	79.133	ENSETEG00000013953	RPUSD4	98	79.133	Echinops_telfairi
ENSPPYG00000004043	RPUSD4	100	83.820	ENSEASG00005022982	RPUSD4	100	83.820	Equus_asinus_asinus
ENSPPYG00000004043	RPUSD4	100	83.554	ENSECAG00000000557	RPUSD4	100	83.554	Equus_caballus
ENSPPYG00000004043	RPUSD4	80	80.978	ENSEEUG00000014036	RPUSD4	80	80.978	Erinaceus_europaeus
ENSPPYG00000004043	RPUSD4	93	50.273	ENSELUG00000008075	rpusd4	96	50.273	Esox_lucius
ENSPPYG00000004043	RPUSD4	100	81.963	ENSFCAG00000029789	RPUSD4	100	81.963	Felis_catus
ENSPPYG00000004043	RPUSD4	88	57.658	ENSFALG00000005171	RPUSD4	98	57.658	Ficedula_albicollis
ENSPPYG00000004043	RPUSD4	100	82.105	ENSFDAG00000014307	RPUSD4	100	82.105	Fukomys_damarensis
ENSPPYG00000004043	RPUSD4	89	50.294	ENSFHEG00000004329	rpusd4	87	50.294	Fundulus_heteroclitus
ENSPPYG00000004043	RPUSD4	85	49.846	ENSGMOG00000017726	rpusd4	96	49.846	Gadus_morhua
ENSPPYG00000004043	RPUSD4	87	57.313	ENSGALG00000024326	RPUSD4	95	57.817	Gallus_gallus
ENSPPYG00000004043	RPUSD4	90	46.857	ENSGAFG00000021559	rpusd4	88	46.110	Gambusia_affinis
ENSPPYG00000004043	RPUSD4	77	50.168	ENSGACG00000001657	rpusd4	97	48.929	Gasterosteus_aculeatus
ENSPPYG00000004043	RPUSD4	89	64.286	ENSGAGG00000000132	RPUSD4	93	64.286	Gopherus_agassizii
ENSPPYG00000004043	RPUSD4	100	97.347	ENSGGOG00000016494	RPUSD4	100	97.347	Gorilla_gorilla
ENSPPYG00000004043	RPUSD4	89	49.853	ENSHBUG00000022838	rpusd4	86	49.853	Haplochromis_burtoni
ENSPPYG00000004043	RPUSD4	100	83.289	ENSHGLG00000002285	RPUSD4	100	83.289	Heterocephalus_glaber_female
ENSPPYG00000004043	RPUSD4	100	83.289	ENSHGLG00100006385	RPUSD4	100	83.289	Heterocephalus_glaber_male
ENSPPYG00000004043	RPUSD4	86	50.915	ENSHCOG00000006612	rpusd4	83	50.915	Hippocampus_comes
ENSPPYG00000004043	RPUSD4	91	49.014	ENSIPUG00000023879	rusd4	91	49.014	Ictalurus_punctatus
ENSPPYG00000004043	RPUSD4	97	84.066	ENSSTOG00000025280	RPUSD4	100	84.066	Ictidomys_tridecemlineatus
ENSPPYG00000004043	RPUSD4	99	82.796	ENSJJAG00000018673	Rpusd4	100	82.796	Jaculus_jaculus
ENSPPYG00000004043	RPUSD4	86	50.755	ENSKMAG00000021805	rpusd4	86	50.755	Kryptolebias_marmoratus
ENSPPYG00000004043	RPUSD4	89	47.606	ENSLBEG00000020394	rpusd4	99	47.606	Labrus_bergylta
ENSPPYG00000004043	RPUSD4	85	61.350	ENSLACG00000011028	RPUSD4	82	61.350	Latimeria_chalumnae
ENSPPYG00000004043	RPUSD4	86	46.037	ENSLOCG00000003124	rpusd4	87	45.732	Lepisosteus_oculatus
ENSPPYG00000004043	RPUSD4	100	82.540	ENSLAFG00000005211	RPUSD4	100	82.540	Loxodonta_africana
ENSPPYG00000004043	RPUSD4	100	93.369	ENSMFAG00000039513	RPUSD4	100	93.369	Macaca_fascicularis
ENSPPYG00000004043	RPUSD4	100	93.369	ENSMMUG00000007933	RPUSD4	100	93.369	Macaca_mulatta
ENSPPYG00000004043	RPUSD4	100	93.369	ENSMNEG00000027414	RPUSD4	100	93.369	Macaca_nemestrina
ENSPPYG00000004043	RPUSD4	100	92.573	ENSMLEG00000042461	RPUSD4	100	92.573	Mandrillus_leucophaeus
ENSPPYG00000004043	RPUSD4	85	50.154	ENSMAMG00000023839	rpusd4	83	50.154	Mastacembelus_armatus
ENSPPYG00000004043	RPUSD4	89	49.853	ENSMZEG00005011999	rpusd4	86	49.853	Maylandia_zebra
ENSPPYG00000004043	RPUSD4	84	58.438	ENSMGAG00000000840	RPUSD4	99	58.333	Meleagris_gallopavo
ENSPPYG00000004043	RPUSD4	100	80.637	ENSMAUG00000010280	Rpusd4	100	80.637	Mesocricetus_auratus
ENSPPYG00000004043	RPUSD4	100	83.820	ENSMICG00000015979	RPUSD4	100	83.820	Microcebus_murinus
ENSPPYG00000004043	RPUSD4	100	77.984	ENSMOCG00000000661	Rpusd4	100	77.984	Microtus_ochrogaster
ENSPPYG00000004043	RPUSD4	82	51.111	ENSMMOG00000021731	rpusd4	93	51.111	Mola_mola
ENSPPYG00000004043	RPUSD4	87	75.305	ENSMODG00000004521	RPUSD4	84	75.305	Monodelphis_domestica
ENSPPYG00000004043	RPUSD4	80	52.288	ENSMALG00000005839	rpusd4	98	50.617	Monopterus_albus
ENSPPYG00000004043	RPUSD4	100	79.576	MGP_CAROLIEiJ_G0031954	Rpusd4	100	79.576	Mus_caroli
ENSPPYG00000004043	RPUSD4	100	78.780	ENSMUSG00000032044	Rpusd4	100	78.780	Mus_musculus
ENSPPYG00000004043	RPUSD4	100	79.576	MGP_PahariEiJ_G0014819	Rpusd4	100	79.576	Mus_pahari
ENSPPYG00000004043	RPUSD4	100	79.045	MGP_SPRETEiJ_G0033078	Rpusd4	100	79.045	Mus_spretus
ENSPPYG00000004043	RPUSD4	98	79.784	ENSMPUG00000006608	RPUSD4	99	79.784	Mustela_putorius_furo
ENSPPYG00000004043	RPUSD4	99	79.255	ENSMLUG00000017328	-	99	78.989	Myotis_lucifugus
ENSPPYG00000004043	RPUSD4	67	84.646	ENSMLUG00000029348	-	100	84.646	Myotis_lucifugus
ENSPPYG00000004043	RPUSD4	98	79.245	ENSNGAG00000020847	Rpusd4	98	79.245	Nannospalax_galili
ENSPPYG00000004043	RPUSD4	86	51.064	ENSNBRG00000005207	rpusd4	95	51.064	Neolamprologus_brichardi
ENSPPYG00000004043	RPUSD4	100	96.286	ENSNLEG00000007465	RPUSD4	100	96.286	Nomascus_leucogenys
ENSPPYG00000004043	RPUSD4	98	69.189	ENSMEUG00000004370	RPUSD4	98	69.189	Notamacropus_eugenii
ENSPPYG00000004043	RPUSD4	70	62.264	ENSOPRG00000013141	-	100	62.264	Ochotona_princeps
ENSPPYG00000004043	RPUSD4	100	81.698	ENSODEG00000004577	RPUSD4	100	81.698	Octodon_degus
ENSPPYG00000004043	RPUSD4	94	49.025	ENSONIG00000018879	rpusd4	92	50.291	Oreochromis_niloticus
ENSPPYG00000004043	RPUSD4	77	69.831	ENSOANG00000007247	RPUSD4	95	69.697	Ornithorhynchus_anatinus
ENSPPYG00000004043	RPUSD4	99	81.432	ENSOCUG00000017039	RPUSD4	99	81.432	Oryctolagus_cuniculus
ENSPPYG00000004043	RPUSD4	91	47.278	ENSORLG00000002750	rpusd4	96	47.278	Oryzias_latipes
ENSPPYG00000004043	RPUSD4	88	48.071	ENSORLG00020002044	rpusd4	83	48.071	Oryzias_latipes_hni
ENSPPYG00000004043	RPUSD4	88	48.368	ENSORLG00015020034	rpusd4	83	48.368	Oryzias_latipes_hsok
ENSPPYG00000004043	RPUSD4	89	49.415	ENSOMEG00000004861	rpusd4	84	49.415	Oryzias_melastigma
ENSPPYG00000004043	RPUSD4	100	82.011	ENSOGAG00000008922	RPUSD4	100	82.011	Otolemur_garnettii
ENSPPYG00000004043	RPUSD4	98	79.459	ENSOARG00000012238	RPUSD4	99	78.307	Ovis_aries
ENSPPYG00000004043	RPUSD4	100	98.143	ENSPPAG00000042883	RPUSD4	93	98.143	Pan_paniscus
ENSPPYG00000004043	RPUSD4	100	81.963	ENSPPRG00000003081	RPUSD4	100	81.963	Panthera_pardus
ENSPPYG00000004043	RPUSD4	100	81.963	ENSPTIG00000012059	RPUSD4	100	81.963	Panthera_tigris_altaica
ENSPPYG00000004043	RPUSD4	100	97.878	ENSPTRG00000004454	RPUSD4	100	97.878	Pan_troglodytes
ENSPPYG00000004043	RPUSD4	100	93.103	ENSPANG00000015040	RPUSD4	100	93.103	Papio_anubis
ENSPPYG00000004043	RPUSD4	89	56.213	ENSPKIG00000023986	rpusd4	86	56.213	Paramormyrops_kingsleyae
ENSPPYG00000004043	RPUSD4	79	67.450	ENSPSIG00000014268	RPUSD4	95	67.450	Pelodiscus_sinensis
ENSPPYG00000004043	RPUSD4	86	49.085	ENSPMGG00000002806	rpusd4	91	49.085	Periophthalmus_magnuspinnatus
ENSPPYG00000004043	RPUSD4	100	74.005	ENSPEMG00000000278	Rpusd4	100	74.005	Peromyscus_maniculatus_bairdii
ENSPPYG00000004043	RPUSD4	81	44.248	ENSPMAG00000008183	rpusd4	98	42.773	Petromyzon_marinus
ENSPPYG00000004043	RPUSD4	93	74.499	ENSPCIG00000010212	RPUSD4	100	72.527	Phascolarctos_cinereus
ENSPPYG00000004043	RPUSD4	90	48.580	ENSPFOG00000019030	rpusd4	91	48.580	Poecilia_formosa
ENSPPYG00000004043	RPUSD4	90	49.143	ENSPLAG00000016848	rpusd4	88	49.143	Poecilia_latipinna
ENSPPYG00000004043	RPUSD4	90	48.000	ENSPMEG00000017534	rpusd4	88	48.000	Poecilia_mexicana
ENSPPYG00000004043	RPUSD4	84	50.000	ENSPREG00000005689	rpusd4	84	50.000	Poecilia_reticulata
ENSPPYG00000004043	RPUSD4	80	80.435	ENSPCAG00000000753	RPUSD4	81	80.435	Procavia_capensis
ENSPPYG00000004043	RPUSD4	98	76.819	ENSPCOG00000020694	RPUSD4	100	76.819	Propithecus_coquereli
ENSPPYG00000004043	RPUSD4	97	83.106	ENSPVAG00000000988	RPUSD4	98	83.106	Pteropus_vampyrus
ENSPPYG00000004043	RPUSD4	89	49.706	ENSPNYG00000009652	rpusd4	86	49.706	Pundamilia_nyererei
ENSPPYG00000004043	RPUSD4	88	51.045	ENSPNAG00000012264	rpusd4	88	51.045	Pygocentrus_nattereri
ENSPPYG00000004043	RPUSD4	100	79.310	ENSRNOG00000011567	Rpusd4	100	79.310	Rattus_norvegicus
ENSPPYG00000004043	RPUSD4	100	92.308	ENSRBIG00000034842	RPUSD4	100	92.308	Rhinopithecus_bieti
ENSPPYG00000004043	RPUSD4	100	92.308	ENSRROG00000039753	RPUSD4	100	92.308	Rhinopithecus_roxellana
ENSPPYG00000004043	RPUSD4	99	88.710	ENSSBOG00000030413	RPUSD4	100	88.710	Saimiri_boliviensis_boliviensis
ENSPPYG00000004043	RPUSD4	80	76.744	ENSSHAG00000008304	RPUSD4	99	76.744	Sarcophilus_harrisii
ENSPPYG00000004043	RPUSD4	88	54.706	ENSSFOG00015006203	rpusd4	92	55.294	Scleropages_formosus
ENSPPYG00000004043	RPUSD4	89	48.094	ENSSMAG00000020978	rpusd4	88	48.094	Scophthalmus_maximus
ENSPPYG00000004043	RPUSD4	84	49.226	ENSSDUG00000013399	rpusd4	84	49.226	Seriola_dumerili
ENSPPYG00000004043	RPUSD4	84	49.226	ENSSLDG00000023507	rpusd4	84	49.226	Seriola_lalandi_dorsalis
ENSPPYG00000004043	RPUSD4	89	61.176	ENSSPUG00000001401	RPUSD4	93	61.834	Sphenodon_punctatus
ENSPPYG00000004043	RPUSD4	94	46.875	ENSSPAG00000012163	rpusd4	98	46.875	Stegastes_partitus
ENSPPYG00000004043	RPUSD4	100	81.432	ENSSSCG00000015233	RPUSD4	100	81.432	Sus_scrofa
ENSPPYG00000004043	RPUSD4	78	60.606	ENSTGUG00000000773	RPUSD4	99	60.606	Taeniopygia_guttata
ENSPPYG00000004043	RPUSD4	86	49.091	ENSTRUG00000012283	rpusd4	84	49.091	Takifugu_rubripes
ENSPPYG00000004043	RPUSD4	87	48.193	ENSTNIG00000014676	rpusd4	84	48.193	Tetraodon_nigroviridis
ENSPPYG00000004043	RPUSD4	100	81.167	ENSTTRG00000001555	RPUSD4	100	81.167	Tursiops_truncatus
ENSPPYG00000004043	RPUSD4	100	81.698	ENSUMAG00000002219	RPUSD4	100	81.698	Ursus_maritimus
ENSPPYG00000004043	RPUSD4	70	81.887	ENSVPAG00000001066	RPUSD4	100	81.887	Vicugna_pacos
ENSPPYG00000004043	RPUSD4	100	80.423	ENSVVUG00000020101	RPUSD4	100	80.423	Vulpes_vulpes
ENSPPYG00000004043	RPUSD4	87	48.512	ENSXCOG00000004676	rpusd4	88	48.214	Xiphophorus_couchianus
ENSPPYG00000004043	RPUSD4	87	48.512	ENSXMAG00000023351	rpusd4	85	48.512	Xiphophorus_maculatus