EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSPPYG00000004635 (Gene tree)
Gene ID: 100446003
Gene Symbol: PYM1
Alias: PYM|WIBG
Full Name: PYM homolog 1%2C exon junction complex associated factor
Gene Type: protein_coding
Species: Pongo_abelii
Status: putative
Strand: Minus strand
Length: 27230 bases
Position: chr12:55649973-55677202
Accession: 100446003
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPPYP00000024712	Mago-bind	PF09282.10	1.2e-13	1	1
ENSPPYP00000005280	Mago-bind	PF09282.10	1.2e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPPYT00000005488	PYM1-202	615	-	ENSPPYP00000005280	204 (aa)	XP_009246153	H2NHM5
ENSPPYT00000033976	PYM1-201	1259	-	ENSPPYP00000024712	195 (aa)	-	K7EVX4

Gene Model

Click here to download ENSPPYG00000004635's gene model file

Pathways

Pathway ID	Pathway Name	Source
pon03013	RNA transport	KEGG
pon03015	mRNA surveillance pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPPYG00000004635's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPPYG00000004635	PYM1	100	98.039	ENSG00000170473	PYM1	100	98.039	Homo_sapiens
ENSPPYG00000004635	PYM1	97	56.650	ENSAPOG00000023045	pym1	91	56.633	Acanthochromis_polyacanthus
ENSPPYG00000004635	PYM1	92	94.413	ENSAMEG00000003091	PYM1	89	93.889	Ailuropoda_melanoleuca
ENSPPYG00000004635	PYM1	97	56.522	ENSACIG00000012769	pym1	91	57.576	Amphilophus_citrinellus
ENSPPYG00000004635	PYM1	97	57.000	ENSAOCG00000021358	pym1	90	57.513	Amphiprion_ocellaris
ENSPPYG00000004635	PYM1	97	57.000	ENSAPEG00000022679	pym1	90	57.513	Amphiprion_percula
ENSPPYG00000004635	PYM1	98	54.455	ENSATEG00000024022	pym1	90	56.931	Anabas_testudineus
ENSPPYG00000004635	PYM1	93	67.179	ENSACAG00000005714	PYM1	91	67.857	Anolis_carolinensis
ENSPPYG00000004635	PYM1	100	97.059	ENSANAG00000036967	PYM1	100	97.059	Aotus_nancymaae
ENSPPYG00000004635	PYM1	98	56.039	ENSAMXG00000007650	pym1	90	58.883	Astyanax_mexicanus
ENSPPYG00000004635	PYM1	92	93.889	ENSBTAG00000031146	PYM1	89	93.889	Bos_taurus
ENSPPYG00000004635	PYM1	100	96.569	ENSCJAG00000041077	PYM1	100	96.569	Callithrix_jacchus
ENSPPYG00000004635	PYM1	92	95.556	ENSCAFG00000000076	PYM1	89	95.556	Canis_familiaris
ENSPPYG00000004635	PYM1	92	95.556	ENSCAFG00020026099	PYM1	89	95.556	Canis_lupus_dingo
ENSPPYG00000004635	PYM1	92	91.667	ENSCHIG00000026207	PYM1	93	91.667	Capra_hircus
ENSPPYG00000004635	PYM1	93	93.923	ENSTSYG00000000787	PYM1	94	92.188	Carlito_syrichta
ENSPPYG00000004635	PYM1	92	91.620	ENSCAPG00000010374	PYM1	94	91.620	Cavia_aperea
ENSPPYG00000004635	PYM1	92	91.667	ENSCPOG00000031546	PYM1	89	91.667	Cavia_porcellus
ENSPPYG00000004635	PYM1	100	97.549	ENSCCAG00000026187	PYM1	100	97.549	Cebus_capucinus
ENSPPYG00000004635	PYM1	100	97.549	ENSCATG00000018801	PYM1	100	97.549	Cercocebus_atys
ENSPPYG00000004635	PYM1	92	86.111	ENSCLAG00000007964	PYM1	89	86.111	Chinchilla_lanigera
ENSPPYG00000004635	PYM1	100	97.436	ENSCSAG00000005291	PYM1	100	97.436	Chlorocebus_sabaeus
ENSPPYG00000004635	PYM1	96	42.365	ENSCING00000006448	-	87	43.750	Ciona_intestinalis
ENSPPYG00000004635	PYM1	96	38.235	ENSCSAVG00000009805	-	84	40.722	Ciona_savignyi
ENSPPYG00000004635	PYM1	100	97.549	ENSCANG00000020338	-	100	97.549	Colobus_angolensis_palliatus
ENSPPYG00000004635	PYM1	96	88.770	ENSCANG00000019757	-	82	93.333	Colobus_angolensis_palliatus
ENSPPYG00000004635	PYM1	94	75.393	ENSCGRG00001004231	-	93	75.393	Cricetulus_griseus_chok1gshd
ENSPPYG00000004635	PYM1	94	88.021	ENSCGRG00001018051	-	94	88.021	Cricetulus_griseus_chok1gshd
ENSPPYG00000004635	PYM1	93	88.950	ENSCGRG00000012495	-	94	87.368	Cricetulus_griseus_crigri
ENSPPYG00000004635	PYM1	94	75.393	ENSCGRG00000018933	-	93	75.393	Cricetulus_griseus_crigri
ENSPPYG00000004635	PYM1	92	52.041	ENSCSEG00000021531	pym1	90	55.051	Cynoglossus_semilaevis
ENSPPYG00000004635	PYM1	98	60.396	ENSCVAG00000017360	pym1	82	60.000	Cyprinodon_variegatus
ENSPPYG00000004635	PYM1	97	56.085	ENSDARG00000046024	pym1	90	55.914	Danio_rerio
ENSPPYG00000004635	PYM1	92	91.111	ENSDNOG00000048414	PYM1	81	91.111	Dasypus_novemcinctus
ENSPPYG00000004635	PYM1	92	92.778	ENSDORG00000029448	Pym1	94	89.583	Dipodomys_ordii
ENSPPYG00000004635	PYM1	97	36.139	FBgn0034918	Pym	88	34.171	Drosophila_melanogaster
ENSPPYG00000004635	PYM1	92	87.222	ENSETEG00000004461	-	94	87.222	Echinops_telfairi
ENSPPYG00000004635	PYM1	91	95.506	ENSEASG00005002271	PYM1	81	95.506	Equus_asinus_asinus
ENSPPYG00000004635	PYM1	92	95.556	ENSECAG00000011870	PYM1	89	95.556	Equus_caballus
ENSPPYG00000004635	PYM1	94	56.383	ENSELUG00000024250	pym1	90	57.219	Esox_lucius
ENSPPYG00000004635	PYM1	93	94.475	ENSFCAG00000013967	PYM1	94	92.708	Felis_catus
ENSPPYG00000004635	PYM1	93	92.265	ENSFDAG00000006314	PYM1	94	90.576	Fukomys_damarensis
ENSPPYG00000004635	PYM1	92	56.545	ENSFHEG00000005884	pym1	91	56.477	Fundulus_heteroclitus
ENSPPYG00000004635	PYM1	92	58.919	ENSGMOG00000007239	pym1	89	58.511	Gadus_morhua
ENSPPYG00000004635	PYM1	93	68.649	ENSGALG00000046169	PYM1	90	69.355	Gallus_gallus
ENSPPYG00000004635	PYM1	97	58.911	ENSGAFG00000003280	pym1	89	58.854	Gambusia_affinis
ENSPPYG00000004635	PYM1	98	53.846	ENSGACG00000010703	pym1	90	54.054	Gasterosteus_aculeatus
ENSPPYG00000004635	PYM1	92	64.948	ENSGAGG00000001973	PYM1	86	64.322	Gopherus_agassizii
ENSPPYG00000004635	PYM1	100	98.039	ENSGGOG00000043246	PYM1	100	98.039	Gorilla_gorilla
ENSPPYG00000004635	PYM1	92	56.995	ENSHBUG00000012719	pym1	91	57.949	Haplochromis_burtoni
ENSPPYG00000004635	PYM1	92	93.333	ENSHGLG00000017155	PYM1	94	90.625	Heterocephalus_glaber_female
ENSPPYG00000004635	PYM1	92	93.333	ENSHGLG00100015341	PYM1	94	93.296	Heterocephalus_glaber_male
ENSPPYG00000004635	PYM1	97	55.392	ENSHCOG00000007987	pym1	76	55.729	Hippocampus_comes
ENSPPYG00000004635	PYM1	98	58.000	ENSIPUG00000005975	wibga	90	57.143	Ictalurus_punctatus
ENSPPYG00000004635	PYM1	92	94.444	ENSSTOG00000014206	PYM1	93	93.478	Ictidomys_tridecemlineatus
ENSPPYG00000004635	PYM1	92	88.333	ENSJJAG00000013338	Pym1	93	87.027	Jaculus_jaculus
ENSPPYG00000004635	PYM1	97	54.502	ENSKMAG00000006351	pym1	91	53.431	Kryptolebias_marmoratus
ENSPPYG00000004635	PYM1	97	58.376	ENSLBEG00000015707	pym1	90	57.368	Labrus_bergylta
ENSPPYG00000004635	PYM1	92	59.794	ENSLACG00000014398	PYM1	92	58.500	Latimeria_chalumnae
ENSPPYG00000004635	PYM1	92	91.667	ENSLAFG00000002369	PYM1	94	88.021	Loxodonta_africana
ENSPPYG00000004635	PYM1	100	97.549	ENSMFAG00000003048	PYM1	100	97.549	Macaca_fascicularis
ENSPPYG00000004635	PYM1	99	96.907	ENSMMUG00000011002	PYM1	95	97.396	Macaca_mulatta
ENSPPYG00000004635	PYM1	100	97.549	ENSMNEG00000034677	PYM1	100	97.549	Macaca_nemestrina
ENSPPYG00000004635	PYM1	100	97.059	ENSMLEG00000007971	PYM1	100	97.059	Mandrillus_leucophaeus
ENSPPYG00000004635	PYM1	97	54.808	ENSMAMG00000001588	pym1	91	55.825	Mastacembelus_armatus
ENSPPYG00000004635	PYM1	92	56.477	ENSMZEG00005026458	pym1	91	57.436	Maylandia_zebra
ENSPPYG00000004635	PYM1	94	88.021	ENSMAUG00000007318	Pym1	94	89.071	Mesocricetus_auratus
ENSPPYG00000004635	PYM1	93	93.923	ENSMICG00000032962	PYM1	94	92.708	Microcebus_murinus
ENSPPYG00000004635	PYM1	93	86.740	ENSMOCG00000010208	Pym1	94	85.417	Microtus_ochrogaster
ENSPPYG00000004635	PYM1	97	54.872	ENSMMOG00000009301	pym1	88	57.838	Mola_mola
ENSPPYG00000004635	PYM1	97	56.219	ENSMALG00000013496	pym1	91	55.670	Monopterus_albus
ENSPPYG00000004635	PYM1	93	88.950	MGP_CAROLIEiJ_G0015953	Pym1	94	87.500	Mus_caroli
ENSPPYG00000004635	PYM1	93	90.055	ENSMUSG00000064030	Pym1	94	88.542	Mus_musculus
ENSPPYG00000004635	PYM1	92	88.333	MGP_PahariEiJ_G0031131	Pym1	93	86.316	Mus_pahari
ENSPPYG00000004635	PYM1	93	90.055	MGP_SPRETEiJ_G0016778	Pym1	94	88.542	Mus_spretus
ENSPPYG00000004635	PYM1	92	95.556	ENSMPUG00000000931	PYM1	89	95.556	Mustela_putorius_furo
ENSPPYG00000004635	PYM1	94	91.803	ENSMLUG00000003586	PYM1	91	91.803	Myotis_lucifugus
ENSPPYG00000004635	PYM1	92	91.111	ENSNGAG00000019207	Pym1	88	90.608	Nannospalax_galili
ENSPPYG00000004635	PYM1	97	57.921	ENSNBRG00000006951	pym1	91	57.949	Neolamprologus_brichardi
ENSPPYG00000004635	PYM1	100	98.529	ENSNLEG00000017588	PYM1	100	98.529	Nomascus_leucogenys
ENSPPYG00000004635	PYM1	92	78.771	ENSMEUG00000001017	PYM1	93	79.096	Notamacropus_eugenii
ENSPPYG00000004635	PYM1	93	89.503	ENSOPRG00000007797	PYM1	94	87.500	Ochotona_princeps
ENSPPYG00000004635	PYM1	92	92.222	ENSODEG00000004289	PYM1	89	92.222	Octodon_degus
ENSPPYG00000004635	PYM1	92	56.122	ENSONIG00000016740	pym1	91	57.071	Oreochromis_niloticus
ENSPPYG00000004635	PYM1	92	91.111	ENSOCUG00000025969	PYM1	83	89.247	Oryctolagus_cuniculus
ENSPPYG00000004635	PYM1	97	59.596	ENSORLG00000030592	pym1	90	58.947	Oryzias_latipes
ENSPPYG00000004635	PYM1	97	59.000	ENSORLG00020011264	pym1	90	58.854	Oryzias_latipes_hni
ENSPPYG00000004635	PYM1	97	60.406	ENSORLG00015005287	pym1	90	59.788	Oryzias_latipes_hsok
ENSPPYG00000004635	PYM1	97	60.000	ENSOMEG00000022250	pym1	90	59.043	Oryzias_melastigma
ENSPPYG00000004635	PYM1	93	95.028	ENSOGAG00000007038	PYM1	89	95.028	Otolemur_garnettii
ENSPPYG00000004635	PYM1	92	91.667	ENSOARG00000010856	PYM1	89	91.667	Ovis_aries
ENSPPYG00000004635	PYM1	100	98.039	ENSPPAG00000043630	PYM1	100	98.039	Pan_paniscus
ENSPPYG00000004635	PYM1	93	92.818	ENSPPRG00000013243	PYM1	94	91.146	Panthera_pardus
ENSPPYG00000004635	PYM1	93	92.265	ENSPTIG00000017380	PYM1	94	90.625	Panthera_tigris_altaica
ENSPPYG00000004635	PYM1	100	98.039	ENSPTRG00000005067	PYM1	100	98.039	Pan_troglodytes
ENSPPYG00000004635	PYM1	100	97.059	ENSPANG00000009562	PYM1	100	97.059	Papio_anubis
ENSPPYG00000004635	PYM1	98	61.194	ENSPKIG00000006301	pym1	90	60.209	Paramormyrops_kingsleyae
ENSPPYG00000004635	PYM1	94	63.768	ENSPSIG00000003043	PYM1	94	63.902	Pelodiscus_sinensis
ENSPPYG00000004635	PYM1	98	60.606	ENSPMGG00000023161	pym1	90	60.638	Periophthalmus_magnuspinnatus
ENSPPYG00000004635	PYM1	94	86.458	ENSPEMG00000009372	Pym1	94	86.458	Peromyscus_maniculatus_bairdii
ENSPPYG00000004635	PYM1	91	80.899	ENSPCIG00000024658	PYM1	87	80.556	Phascolarctos_cinereus
ENSPPYG00000004635	PYM1	97	60.000	ENSPFOG00000008193	pym1	88	60.106	Poecilia_formosa
ENSPPYG00000004635	PYM1	97	59.000	ENSPLAG00000009228	pym1	89	58.947	Poecilia_latipinna
ENSPPYG00000004635	PYM1	97	59.000	ENSPMEG00000001505	pym1	89	58.947	Poecilia_mexicana
ENSPPYG00000004635	PYM1	93	95.028	ENSPCOG00000019706	PYM1	94	93.750	Propithecus_coquereli
ENSPPYG00000004635	PYM1	99	96.373	ENSPVAG00000011437	PYM1	100	94.898	Pteropus_vampyrus
ENSPPYG00000004635	PYM1	92	57.292	ENSPNYG00000012871	pym1	90	57.812	Pundamilia_nyererei
ENSPPYG00000004635	PYM1	97	57.971	ENSPNAG00000018833	pym1	90	58.500	Pygocentrus_nattereri
ENSPPYG00000004635	PYM1	90	67.045	ENSRNOG00000049415	AABR07055413.1	85	67.045	Rattus_norvegicus
ENSPPYG00000004635	PYM1	93	86.740	ENSRNOG00000058130	Pym1	94	84.375	Rattus_norvegicus
ENSPPYG00000004635	PYM1	99	92.228	ENSRBIG00000033362	PYM1	94	92.708	Rhinopithecus_bieti
ENSPPYG00000004635	PYM1	100	97.059	ENSRROG00000043620	PYM1	100	97.059	Rhinopithecus_roxellana
ENSPPYG00000004635	PYM1	100	97.549	ENSSBOG00000029393	PYM1	100	97.549	Saimiri_boliviensis_boliviensis
ENSPPYG00000004635	PYM1	91	79.213	ENSSHAG00000008280	PYM1	88	79.213	Sarcophilus_harrisii
ENSPPYG00000004635	PYM1	91	62.431	ENSSFOG00015021475	pym1	90	61.828	Scleropages_formosus
ENSPPYG00000004635	PYM1	97	58.000	ENSSMAG00000020912	pym1	90	58.549	Scophthalmus_maximus
ENSPPYG00000004635	PYM1	97	53.922	ENSSDUG00000001807	pym1	91	56.566	Seriola_dumerili
ENSPPYG00000004635	PYM1	97	58.247	ENSSLDG00000013730	pym1	90	61.170	Seriola_lalandi_dorsalis
ENSPPYG00000004635	PYM1	92	90.000	ENSSARG00000009569	PYM1	94	90.000	Sorex_araneus
ENSPPYG00000004635	PYM1	93	64.362	ENSSPUG00000015059	PYM1	94	63.959	Sphenodon_punctatus
ENSPPYG00000004635	PYM1	97	56.158	ENSSPAG00000020100	pym1	91	56.158	Stegastes_partitus
ENSPPYG00000004635	PYM1	92	92.778	ENSSSCG00000040825	PYM1	89	92.778	Sus_scrofa
ENSPPYG00000004635	PYM1	97	57.360	ENSTRUG00000021367	pym1	89	58.289	Takifugu_rubripes
ENSPPYG00000004635	PYM1	98	52.632	ENSTNIG00000012534	pym1	88	53.299	Tetraodon_nigroviridis
ENSPPYG00000004635	PYM1	92	87.778	ENSTBEG00000004208	PYM1	94	87.778	Tupaia_belangeri
ENSPPYG00000004635	PYM1	93	93.923	ENSTTRG00000014971	PYM1	94	92.935	Tursiops_truncatus
ENSPPYG00000004635	PYM1	92	95.000	ENSUAMG00000014521	PYM1	89	95.000	Ursus_americanus
ENSPPYG00000004635	PYM1	92	94.972	ENSUMAG00000016241	PYM1	81	94.413	Ursus_maritimus
ENSPPYG00000004635	PYM1	92	95.000	ENSVVUG00000022749	PYM1	89	95.000	Vulpes_vulpes
ENSPPYG00000004635	PYM1	92	62.032	ENSXETG00000021850	pym1	90	62.827	Xenopus_tropicalis
ENSPPYG00000004635	PYM1	97	59.000	ENSXMAG00000011649	pym1	89	58.947	Xiphophorus_maculatus