EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSPPYG00000004913 (Gene tree)
Gene ID: 100173737
Gene Symbol: PRDM4
Alias: -
Full Name: PR/SET domain 4
Gene Type: protein_coding
Species: Pongo_abelii
Status: putative
Strand: Minus strand
Length: 28960 bases
Position: chr12:109503731-109532690
Accession: 100173737
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPPYP00000005606	zf-C2H2	PF00096.26	3.3e-19	1	2
ENSPPYP00000005606	zf-C2H2	PF00096.26	3.3e-19	2	2
ENSPPYP00000005606	zf-met	PF12874.7	2.5e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPPYT00000005821	-	4757	-	ENSPPYP00000005606	801 (aa)	-	Q5R5M1

Gene Model

Click here to download ENSPPYG00000004913's gene model file

Pathways

Pathway ID	Pathway Name	Source
pon04722	Neurotrophin signaling pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPPYG00000004913's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPPYG00000004913	PRDM4	100	99.625	ENSG00000110851	PRDM4	100	100.000	Homo_sapiens
ENSPPYG00000004913	PRDM4	99	97.497	ENSAMEG00000016174	PRDM4	99	97.497	Ailuropoda_melanoleuca
ENSPPYG00000004913	PRDM4	99	87.343	ENSAPLG00000009846	PRDM4	99	86.717	Anas_platyrhynchos
ENSPPYG00000004913	PRDM4	100	99.001	ENSANAG00000024800	PRDM4	100	99.001	Aotus_nancymaae
ENSPPYG00000004913	PRDM4	100	97.129	ENSBTAG00000012999	PRDM4	100	97.129	Bos_taurus
ENSPPYG00000004913	PRDM4	100	98.502	ENSCJAG00000015261	PRDM4	100	98.502	Callithrix_jacchus
ENSPPYG00000004913	PRDM4	100	97.503	ENSCAFG00000001788	PRDM4	100	97.503	Canis_familiaris
ENSPPYG00000004913	PRDM4	100	97.503	ENSCAFG00020004916	PRDM4	100	97.503	Canis_lupus_dingo
ENSPPYG00000004913	PRDM4	100	96.754	ENSCHIG00000019409	PRDM4	100	96.754	Capra_hircus
ENSPPYG00000004913	PRDM4	100	97.753	ENSTSYG00000009248	PRDM4	100	97.753	Carlito_syrichta
ENSPPYG00000004913	PRDM4	99	91.114	ENSCAPG00000013937	PRDM4	99	90.989	Cavia_aperea
ENSPPYG00000004913	PRDM4	99	90.559	ENSCPOG00000022385	PRDM4	100	90.435	Cavia_porcellus
ENSPPYG00000004913	PRDM4	100	99.126	ENSCCAG00000036033	PRDM4	100	99.126	Cebus_capucinus
ENSPPYG00000004913	PRDM4	100	99.251	ENSCATG00000044797	PRDM4	100	99.251	Cercocebus_atys
ENSPPYG00000004913	PRDM4	99	92.786	ENSCLAG00000007545	PRDM4	100	93.159	Chinchilla_lanigera
ENSPPYG00000004913	PRDM4	100	99.501	ENSCSAG00000002896	PRDM4	100	99.501	Chlorocebus_sabaeus
ENSPPYG00000004913	PRDM4	76	98.182	ENSCHOG00000001744	PRDM4	86	98.182	Choloepus_hoffmanni
ENSPPYG00000004913	PRDM4	99	88.080	ENSCPBG00000023187	PRDM4	100	87.704	Chrysemys_picta_bellii
ENSPPYG00000004913	PRDM4	100	99.376	ENSCANG00000021804	PRDM4	100	99.376	Colobus_angolensis_palliatus
ENSPPYG00000004913	PRDM4	99	93.035	ENSCGRG00001015102	-	100	92.662	Cricetulus_griseus_chok1gshd
ENSPPYG00000004913	PRDM4	96	93.032	ENSCGRG00000004044	-	100	92.645	Cricetulus_griseus_crigri
ENSPPYG00000004913	PRDM4	100	96.380	ENSDNOG00000032478	PRDM4	100	96.380	Dasypus_novemcinctus
ENSPPYG00000004913	PRDM4	99	82.058	ENSDORG00000015081	-	100	81.807	Dipodomys_ordii
ENSPPYG00000004913	PRDM4	93	45.798	ENSEBUG00000003775	prdm4	99	46.122	Eptatretus_burgeri
ENSPPYG00000004913	PRDM4	100	97.253	ENSECAG00000015423	PRDM4	100	97.253	Equus_caballus
ENSPPYG00000004913	PRDM4	94	93.342	ENSEEUG00000006569	PRDM4	99	92.943	Erinaceus_europaeus
ENSPPYG00000004913	PRDM4	99	60.267	ENSELUG00000015265	prdm4	99	60.510	Esox_lucius
ENSPPYG00000004913	PRDM4	100	98.002	ENSFCAG00000022478	PRDM4	100	98.002	Felis_catus
ENSPPYG00000004913	PRDM4	99	87.453	ENSFALG00000013342	PRDM4	100	86.951	Ficedula_albicollis
ENSPPYG00000004913	PRDM4	100	86.675	ENSGALG00000012619	PRDM4	100	86.052	Gallus_gallus
ENSPPYG00000004913	PRDM4	99	87.970	ENSGAGG00000002763	PRDM4	95	87.594	Gopherus_agassizii
ENSPPYG00000004913	PRDM4	99	99.500	ENSGGOG00000001244	PRDM4	99	99.500	Gorilla_gorilla
ENSPPYG00000004913	PRDM4	99	93.726	ENSHGLG00000004590	PRDM4	98	93.476	Heterocephalus_glaber_female
ENSPPYG00000004913	PRDM4	99	92.671	ENSHGLG00100007464	PRDM4	100	92.422	Heterocephalus_glaber_male
ENSPPYG00000004913	PRDM4	95	61.140	ENSIPUG00000024162	prdm4	93	61.488	Ictalurus_punctatus
ENSPPYG00000004913	PRDM4	100	96.629	ENSSTOG00000016168	PRDM4	100	96.629	Ictidomys_tridecemlineatus
ENSPPYG00000004913	PRDM4	99	95.849	ENSJJAG00000022448	-	95	93.280	Jaculus_jaculus
ENSPPYG00000004913	PRDM4	99	72.649	ENSLACG00000007452	PRDM4	99	72.896	Latimeria_chalumnae
ENSPPYG00000004913	PRDM4	78	41.689	ENSLOCG00000017092	prdm4	100	52.814	Lepisosteus_oculatus
ENSPPYG00000004913	PRDM4	98	96.574	ENSLAFG00000001483	PRDM4	100	96.574	Loxodonta_africana
ENSPPYG00000004913	PRDM4	100	99.625	ENSMFAG00000041862	PRDM4	100	99.625	Macaca_fascicularis
ENSPPYG00000004913	PRDM4	100	99.625	ENSMMUG00000015550	PRDM4	100	99.625	Macaca_mulatta
ENSPPYG00000004913	PRDM4	100	99.376	ENSMNEG00000032319	PRDM4	100	99.376	Macaca_nemestrina
ENSPPYG00000004913	PRDM4	100	99.501	ENSMLEG00000039607	PRDM4	100	99.501	Mandrillus_leucophaeus
ENSPPYG00000004913	PRDM4	99	79.250	ENSMGAG00000012815	PRDM4	100	78.625	Meleagris_gallopavo
ENSPPYG00000004913	PRDM4	100	96.504	ENSMICG00000007807	PRDM4	100	96.504	Microcebus_murinus
ENSPPYG00000004913	PRDM4	99	93.860	ENSMOCG00000000753	Prdm4	99	93.609	Microtus_ochrogaster
ENSPPYG00000004913	PRDM4	99	94.479	ENSMUSG00000035529	Prdm4	100	94.228	Mus_musculus
ENSPPYG00000004913	PRDM4	99	93.977	MGP_PahariEiJ_G0031398	Prdm4	100	94.028	Mus_pahari
ENSPPYG00000004913	PRDM4	99	95.107	MGP_SPRETEiJ_G0016505	Prdm4	100	95.172	Mus_spretus
ENSPPYG00000004913	PRDM4	99	91.397	ENSMPUG00000012238	PRDM4	99	91.397	Mustela_putorius_furo
ENSPPYG00000004913	PRDM4	99	96.992	ENSMLUG00000000767	PRDM4	99	96.992	Myotis_lucifugus
ENSPPYG00000004913	PRDM4	99	95.609	ENSNGAG00000018627	Prdm4	100	95.609	Nannospalax_galili
ENSPPYG00000004913	PRDM4	100	99.501	ENSNLEG00000006748	PRDM4	100	99.501	Nomascus_leucogenys
ENSPPYG00000004913	PRDM4	89	88.967	ENSMEUG00000004495	PRDM4	89	88.967	Notamacropus_eugenii
ENSPPYG00000004913	PRDM4	88	94.940	ENSOPRG00000010192	PRDM4	89	94.940	Ochotona_princeps
ENSPPYG00000004913	PRDM4	99	90.625	ENSODEG00000014750	PRDM4	99	90.500	Octodon_degus
ENSPPYG00000004913	PRDM4	100	90.762	ENSOANG00000005526	PRDM4	100	90.762	Ornithorhynchus_anatinus
ENSPPYG00000004913	PRDM4	93	96.567	ENSOCUG00000012859	PRDM4	96	96.567	Oryctolagus_cuniculus
ENSPPYG00000004913	PRDM4	99	97.742	ENSOGAG00000011945	PRDM4	100	97.742	Otolemur_garnettii
ENSPPYG00000004913	PRDM4	100	96.629	ENSOARG00000017955	PRDM4	100	96.629	Ovis_aries
ENSPPYG00000004913	PRDM4	100	99.625	ENSPPAG00000038438	PRDM4	100	99.625	Pan_paniscus
ENSPPYG00000004913	PRDM4	100	98.002	ENSPPRG00000004144	PRDM4	100	98.002	Panthera_pardus
ENSPPYG00000004913	PRDM4	100	98.002	ENSPTIG00000005847	PRDM4	100	98.002	Panthera_tigris_altaica
ENSPPYG00000004913	PRDM4	100	99.625	ENSPTRG00000005400	PRDM4	100	99.625	Pan_troglodytes
ENSPPYG00000004913	PRDM4	100	99.625	ENSPANG00000022084	PRDM4	100	99.625	Papio_anubis
ENSPPYG00000004913	PRDM4	99	59.572	ENSPKIG00000000875	prdm4	99	60.285	Paramormyrops_kingsleyae
ENSPPYG00000004913	PRDM4	91	81.749	ENSPSIG00000012066	PRDM4	100	81.749	Pelodiscus_sinensis
ENSPPYG00000004913	PRDM4	99	95.483	ENSPEMG00000014598	Prdm4	100	95.483	Peromyscus_maniculatus_bairdii
ENSPPYG00000004913	PRDM4	100	89.055	ENSPCIG00000009471	PRDM4	100	89.055	Phascolarctos_cinereus
ENSPPYG00000004913	PRDM4	83	95.833	ENSPCAG00000009987	PRDM4	83	95.833	Procavia_capensis
ENSPPYG00000004913	PRDM4	100	96.754	ENSPCOG00000021060	PRDM4	100	96.754	Propithecus_coquereli
ENSPPYG00000004913	PRDM4	100	96.758	ENSPVAG00000001596	PRDM4	100	96.758	Pteropus_vampyrus
ENSPPYG00000004913	PRDM4	99	93.860	ENSRNOG00000004962	Prdm4	100	93.609	Rattus_norvegicus
ENSPPYG00000004913	PRDM4	100	99.376	ENSRBIG00000035488	PRDM4	100	99.376	Rhinopithecus_bieti
ENSPPYG00000004913	PRDM4	100	99.501	ENSRROG00000012779	PRDM4	100	99.501	Rhinopithecus_roxellana
ENSPPYG00000004913	PRDM4	100	99.001	ENSSBOG00000000403	PRDM4	100	99.001	Saimiri_boliviensis_boliviensis
ENSPPYG00000004913	PRDM4	99	63.547	ENSSFOG00015023358	prdm4	99	63.547	Scleropages_formosus
ENSPPYG00000004913	PRDM4	100	97.004	ENSSSCG00000000160	PRDM4	100	97.004	Sus_scrofa
ENSPPYG00000004913	PRDM4	99	87.343	ENSTGUG00000010962	-	99	86.842	Taeniopygia_guttata
ENSPPYG00000004913	PRDM4	73	89.590	ENSTBEG00000001732	PRDM4	84	89.590	Tupaia_belangeri
ENSPPYG00000004913	PRDM4	100	96.629	ENSTTRG00000011056	PRDM4	100	96.629	Tursiops_truncatus
ENSPPYG00000004913	PRDM4	100	97.878	ENSUAMG00000022796	PRDM4	100	97.878	Ursus_americanus
ENSPPYG00000004913	PRDM4	100	97.878	ENSUMAG00000017231	PRDM4	100	97.878	Ursus_maritimus
ENSPPYG00000004913	PRDM4	99	97.491	ENSVPAG00000002215	PRDM4	100	97.491	Vicugna_pacos
ENSPPYG00000004913	PRDM4	100	97.503	ENSVVUG00000023397	PRDM4	100	97.503	Vulpes_vulpes