EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPPYG00000005084 (Gene tree)
Gene ID: -
Gene Symbol: SBNO1
Alias: FLJ10701|FLJ10833|MOP3|Sno
Full Name: strawberry notch homolog 1
Gene Type: protein_coding
Species: Pongo_abelii
Status: putative
Strand: Minus strand
Length: 56734 bases
Position: chr12:125667744-125724477
Accession: 22973
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPPYP00000005791	ResIII	PF04851.15	4.1e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPPYT00000006012	SBNO1-201	4815	-	ENSPPYP00000005791	1390 (aa)	-	H2NJ14

Gene Model

Click here to download ENSPPYG00000005084's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPPYG00000005084's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPPYG00000005084	SBNO1	100	99.425	ENSG00000139697	SBNO1	100	99.425	Homo_sapiens
ENSPPYG00000005084	SBNO1	83	81.341	ENSAPOG00000003196	sbno1	98	80.911	Acanthochromis_polyacanthus
ENSPPYG00000005084	SBNO1	100	97.421	ENSAMEG00000015151	SBNO1	100	97.421	Ailuropoda_melanoleuca
ENSPPYG00000005084	SBNO1	99	74.664	ENSACIG00000008088	sbno1	99	74.560	Amphilophus_citrinellus
ENSPPYG00000005084	SBNO1	99	75.316	ENSAOCG00000014859	sbno1	99	75.035	Amphiprion_ocellaris
ENSPPYG00000005084	SBNO1	99	75.316	ENSAPEG00000006069	sbno1	99	75.035	Amphiprion_percula
ENSPPYG00000005084	SBNO1	99	76.104	ENSATEG00000006667	sbno1	99	75.893	Anabas_testudineus
ENSPPYG00000005084	SBNO1	100	91.882	ENSAPLG00000015674	SBNO1	100	91.888	Anas_platyrhynchos
ENSPPYG00000005084	SBNO1	100	87.136	ENSACAG00000015441	SBNO1	88	87.136	Anolis_carolinensis
ENSPPYG00000005084	SBNO1	100	98.349	ENSANAG00000029958	-	100	98.349	Aotus_nancymaae
ENSPPYG00000005084	SBNO1	99	74.194	ENSACLG00000024913	sbno1	99	74.624	Astatotilapia_calliptera
ENSPPYG00000005084	SBNO1	99	79.004	ENSAMXG00000019473	sbno1	99	79.858	Astyanax_mexicanus
ENSPPYG00000005084	SBNO1	99	97.701	ENSBTAG00000020505	SBNO1	99	97.701	Bos_taurus
ENSPPYG00000005084	SBNO1	100	98.492	ENSCJAG00000016599	SBNO1	100	98.492	Callithrix_jacchus
ENSPPYG00000005084	SBNO1	100	97.634	ENSCAFG00000007503	SBNO1	100	97.634	Canis_familiaris
ENSPPYG00000005084	SBNO1	100	96.913	ENSCAFG00020015363	SBNO1	100	96.913	Canis_lupus_dingo
ENSPPYG00000005084	SBNO1	99	97.628	ENSCHIG00000008382	SBNO1	99	98.732	Capra_hircus
ENSPPYG00000005084	SBNO1	100	97.918	ENSTSYG00000012749	SBNO1	100	97.918	Carlito_syrichta
ENSPPYG00000005084	SBNO1	96	97.220	ENSCAPG00000000384	SBNO1	99	99.277	Cavia_aperea
ENSPPYG00000005084	SBNO1	100	96.552	ENSCPOG00000008109	SBNO1	99	99.277	Cavia_porcellus
ENSPPYG00000005084	SBNO1	100	94.118	ENSCCAG00000035316	SBNO1	100	94.118	Cebus_capucinus
ENSPPYG00000005084	SBNO1	99	97.264	ENSCATG00000008239	SBNO1	98	100.000	Cercocebus_atys
ENSPPYG00000005084	SBNO1	100	96.626	ENSCLAG00000008995	SBNO1	99	99.277	Chinchilla_lanigera
ENSPPYG00000005084	SBNO1	83	99.482	ENSCSAG00000002064	SBNO1	100	99.482	Chlorocebus_sabaeus
ENSPPYG00000005084	SBNO1	96	94.033	ENSCHOG00000008814	SBNO1	96	94.033	Choloepus_hoffmanni
ENSPPYG00000005084	SBNO1	100	92.032	ENSCPBG00000025968	SBNO1	99	91.960	Chrysemys_picta_bellii
ENSPPYG00000005084	SBNO1	100	93.974	ENSCANG00000042688	-	100	93.974	Colobus_angolensis_palliatus
ENSPPYG00000005084	SBNO1	100	96.770	ENSCGRG00001017470	Sbno1	99	98.373	Cricetulus_griseus_chok1gshd
ENSPPYG00000005084	SBNO1	100	96.770	ENSCGRG00000004756	Sbno1	99	98.373	Cricetulus_griseus_crigri
ENSPPYG00000005084	SBNO1	99	74.631	ENSCSEG00000011919	sbno1	99	75.070	Cynoglossus_semilaevis
ENSPPYG00000005084	SBNO1	99	75.458	ENSCVAG00000007038	sbno1	99	75.439	Cyprinodon_variegatus
ENSPPYG00000005084	SBNO1	99	78.914	ENSDARG00000099080	sbno1	99	79.271	Danio_rerio
ENSPPYG00000005084	SBNO1	100	96.184	ENSDNOG00000017147	SBNO1	98	97.122	Dasypus_novemcinctus
ENSPPYG00000005084	SBNO1	95	96.847	ENSDORG00000015261	Sbno1	99	96.847	Dipodomys_ordii
ENSPPYG00000005084	SBNO1	93	90.596	ENSETEG00000005620	SBNO1	93	90.596	Echinops_telfairi
ENSPPYG00000005084	SBNO1	75	62.628	ENSEBUG00000013823	sbno1	93	62.500	Eptatretus_burgeri
ENSPPYG00000005084	SBNO1	51	93.362	ENSEASG00005012595	-	92	93.362	Equus_asinus_asinus
ENSPPYG00000005084	SBNO1	100	98.062	ENSECAG00000006127	SBNO1	100	98.062	Equus_caballus
ENSPPYG00000005084	SBNO1	83	98.352	ENSEEUG00000003793	SBNO1	83	98.352	Erinaceus_europaeus
ENSPPYG00000005084	SBNO1	99	77.465	ENSELUG00000002886	sbno1	99	77.535	Esox_lucius
ENSPPYG00000005084	SBNO1	99	97.989	ENSFCAG00000015331	SBNO1	99	97.989	Felis_catus
ENSPPYG00000005084	SBNO1	100	91.307	ENSFALG00000009273	SBNO1	100	91.888	Ficedula_albicollis
ENSPPYG00000005084	SBNO1	99	95.255	ENSFDAG00000014232	SBNO1	99	95.290	Fukomys_damarensis
ENSPPYG00000005084	SBNO1	99	76.099	ENSFHEG00000007360	sbno1	99	75.546	Fundulus_heteroclitus
ENSPPYG00000005084	SBNO1	94	77.769	ENSGMOG00000018229	sbno1	99	78.354	Gadus_morhua
ENSPPYG00000005084	SBNO1	88	92.039	ENSGALG00000003392	SBNO1	99	92.039	Gallus_gallus
ENSPPYG00000005084	SBNO1	99	75.901	ENSGAFG00000003960	sbno1	99	75.702	Gambusia_affinis
ENSPPYG00000005084	SBNO1	94	78.855	ENSGACG00000015633	sbno1	99	78.550	Gasterosteus_aculeatus
ENSPPYG00000005084	SBNO1	97	94.840	ENSGAGG00000001065	SBNO1	100	91.098	Gopherus_agassizii
ENSPPYG00000005084	SBNO1	100	99.353	ENSGGOG00000015000	SBNO1	100	99.353	Gorilla_gorilla
ENSPPYG00000005084	SBNO1	99	68.522	ENSHBUG00000011910	sbno1	99	68.951	Haplochromis_burtoni
ENSPPYG00000005084	SBNO1	100	96.841	ENSHGLG00000014165	-	100	96.841	Heterocephalus_glaber_female
ENSPPYG00000005084	SBNO1	91	84.980	ENSHCOG00000003246	sbno1	95	84.980	Hippocampus_comes
ENSPPYG00000005084	SBNO1	99	78.378	ENSIPUG00000015830	Sbno1	98	78.348	Ictalurus_punctatus
ENSPPYG00000005084	SBNO1	100	97.845	ENSSTOG00000023221	SBNO1	99	99.458	Ictidomys_tridecemlineatus
ENSPPYG00000005084	SBNO1	100	96.985	ENSJJAG00000001741	Sbno1	100	96.985	Jaculus_jaculus
ENSPPYG00000005084	SBNO1	99	75.796	ENSKMAG00000009696	sbno1	99	75.563	Kryptolebias_marmoratus
ENSPPYG00000005084	SBNO1	99	75.787	ENSLBEG00000007623	sbno1	99	75.787	Labrus_bergylta
ENSPPYG00000005084	SBNO1	99	80.701	ENSLACG00000017227	SBNO1	99	83.144	Latimeria_chalumnae
ENSPPYG00000005084	SBNO1	99	81.437	ENSLOCG00000005725	sbno1	97	81.579	Lepisosteus_oculatus
ENSPPYG00000005084	SBNO1	100	96.554	ENSLAFG00000002135	SBNO1	100	96.554	Loxodonta_africana
ENSPPYG00000005084	SBNO1	100	99.139	ENSMFAG00000031429	SBNO1	100	99.139	Macaca_fascicularis
ENSPPYG00000005084	SBNO1	100	99.210	ENSMMUG00000011496	SBNO1	100	99.210	Macaca_mulatta
ENSPPYG00000005084	SBNO1	100	97.272	ENSMLEG00000033260	SBNO1	99	100.000	Mandrillus_leucophaeus
ENSPPYG00000005084	SBNO1	99	76.006	ENSMAMG00000005473	sbno1	99	75.562	Mastacembelus_armatus
ENSPPYG00000005084	SBNO1	100	91.954	ENSMGAG00000003274	SBNO1	100	92.032	Meleagris_gallopavo
ENSPPYG00000005084	SBNO1	50	92.120	ENSMAUG00000004834	-	100	92.120	Mesocricetus_auratus
ENSPPYG00000005084	SBNO1	100	96.770	ENSMICG00000006573	-	100	96.770	Microcebus_murinus
ENSPPYG00000005084	SBNO1	96	97.865	ENSMOCG00000009390	Sbno1	99	98.734	Microtus_ochrogaster
ENSPPYG00000005084	SBNO1	99	71.701	ENSMMOG00000008691	sbno1	99	71.540	Mola_mola
ENSPPYG00000005084	SBNO1	99	94.828	ENSMODG00000012470	SBNO1	98	94.899	Monodelphis_domestica
ENSPPYG00000005084	SBNO1	99	75.193	ENSMALG00000001056	sbno1	99	75.333	Monopterus_albus
ENSPPYG00000005084	SBNO1	99	96.837	MGP_CAROLIEiJ_G0027749	Sbno1	99	96.837	Mus_caroli
ENSPPYG00000005084	SBNO1	99	97.196	ENSMUSG00000038095	Sbno1	99	97.196	Mus_musculus
ENSPPYG00000005084	SBNO1	99	97.052	MGP_PahariEiJ_G0024329	Sbno1	99	97.052	Mus_pahari
ENSPPYG00000005084	SBNO1	99	96.981	MGP_SPRETEiJ_G0028747	Sbno1	99	96.981	Mus_spretus
ENSPPYG00000005084	SBNO1	100	97.918	ENSMPUG00000001658	SBNO1	100	97.918	Mustela_putorius_furo
ENSPPYG00000005084	SBNO1	100	97.344	ENSMLUG00000017159	SBNO1	100	97.344	Myotis_lucifugus
ENSPPYG00000005084	SBNO1	100	97.703	ENSNGAG00000012620	Sbno1	100	97.703	Nannospalax_galili
ENSPPYG00000005084	SBNO1	99	74.284	ENSNBRG00000019189	sbno1	99	74.713	Neolamprologus_brichardi
ENSPPYG00000005084	SBNO1	100	95.474	ENSNLEG00000001502	SBNO1	100	95.474	Nomascus_leucogenys
ENSPPYG00000005084	SBNO1	67	77.433	ENSMEUG00000008768	-	93	90.506	Notamacropus_eugenii
ENSPPYG00000005084	SBNO1	100	93.472	ENSOPRG00000011054	SBNO1	100	93.974	Ochotona_princeps
ENSPPYG00000005084	SBNO1	100	96.839	ENSODEG00000009997	SBNO1	99	99.277	Octodon_degus
ENSPPYG00000005084	SBNO1	99	75.529	ENSONIG00000015348	sbno1	99	76.023	Oreochromis_niloticus
ENSPPYG00000005084	SBNO1	98	95.912	ENSOCUG00000002441	SBNO1	95	95.912	Oryctolagus_cuniculus
ENSPPYG00000005084	SBNO1	99	74.947	ENSORLG00000001593	sbno1	99	74.982	Oryzias_latipes
ENSPPYG00000005084	SBNO1	99	75.000	ENSORLG00020015216	sbno1	99	74.930	Oryzias_latipes_hni
ENSPPYG00000005084	SBNO1	99	75.070	ENSORLG00015002726	sbno1	99	75.000	Oryzias_latipes_hsok
ENSPPYG00000005084	SBNO1	99	75.565	ENSOMEG00000019313	sbno1	99	75.353	Oryzias_melastigma
ENSPPYG00000005084	SBNO1	50	89.255	ENSOGAG00000010781	-	100	89.255	Otolemur_garnettii
ENSPPYG00000005084	SBNO1	99	97.416	ENSOARG00000004404	SBNO1	99	97.416	Ovis_aries
ENSPPYG00000005084	SBNO1	100	99.210	ENSPPAG00000024635	SBNO1	100	99.210	Pan_paniscus
ENSPPYG00000005084	SBNO1	99	97.989	ENSPPRG00000022092	SBNO1	99	97.989	Panthera_pardus
ENSPPYG00000005084	SBNO1	100	97.703	ENSPTIG00000017803	SBNO1	100	97.703	Panthera_tigris_altaica
ENSPPYG00000005084	SBNO1	100	99.282	ENSPTRG00000005597	SBNO1	100	99.282	Pan_troglodytes
ENSPPYG00000005084	SBNO1	100	99.282	ENSPANG00000011640	SBNO1	100	99.282	Papio_anubis
ENSPPYG00000005084	SBNO1	99	79.986	ENSPKIG00000001441	sbno1	99	80.286	Paramormyrops_kingsleyae
ENSPPYG00000005084	SBNO1	92	86.858	ENSPSIG00000009256	-	100	87.403	Pelodiscus_sinensis
ENSPPYG00000005084	SBNO1	100	90.916	ENSPSIG00000009572	-	100	91.059	Pelodiscus_sinensis
ENSPPYG00000005084	SBNO1	100	96.554	ENSPEMG00000016087	Sbno1	99	98.373	Peromyscus_maniculatus_bairdii
ENSPPYG00000005084	SBNO1	99	94.185	ENSPCIG00000010985	SBNO1	99	94.472	Phascolarctos_cinereus
ENSPPYG00000005084	SBNO1	99	76.059	ENSPFOG00000005069	sbno1	99	76.000	Poecilia_formosa
ENSPPYG00000005084	SBNO1	99	75.918	ENSPLAG00000015015	sbno1	99	76.037	Poecilia_latipinna
ENSPPYG00000005084	SBNO1	99	76.147	ENSPMEG00000021212	sbno1	99	76.087	Poecilia_mexicana
ENSPPYG00000005084	SBNO1	99	75.794	ENSPREG00000017746	sbno1	99	75.736	Poecilia_reticulata
ENSPPYG00000005084	SBNO1	89	91.770	ENSPCAG00000008634	SBNO1	88	91.724	Procavia_capensis
ENSPPYG00000005084	SBNO1	100	97.846	ENSPCOG00000024277	SBNO1	99	99.273	Propithecus_coquereli
ENSPPYG00000005084	SBNO1	87	99.008	ENSPVAG00000015304	SBNO1	87	99.008	Pteropus_vampyrus
ENSPPYG00000005084	SBNO1	99	75.847	ENSPNYG00000004291	sbno1	99	76.130	Pundamilia_nyererei
ENSPPYG00000005084	SBNO1	99	78.820	ENSPNAG00000015622	sbno1	99	78.749	Pygocentrus_nattereri
ENSPPYG00000005084	SBNO1	99	96.911	ENSRNOG00000001064	Sbno1	99	99.457	Rattus_norvegicus
ENSPPYG00000005084	SBNO1	100	99.210	ENSRROG00000034230	SBNO1	100	99.210	Rhinopithecus_roxellana
ENSPPYG00000005084	SBNO1	96	93.378	ENSSBOG00000015422	SBNO1	100	93.378	Saimiri_boliviensis_boliviensis
ENSPPYG00000005084	SBNO1	99	79.414	ENSSFOG00015019025	sbno1	99	79.914	Scleropages_formosus
ENSPPYG00000005084	SBNO1	99	76.023	ENSSMAG00000013640	sbno1	99	75.719	Scophthalmus_maximus
ENSPPYG00000005084	SBNO1	99	75.579	ENSSDUG00000023480	sbno1	99	75.368	Seriola_dumerili
ENSPPYG00000005084	SBNO1	99	75.509	ENSSLDG00000007928	sbno1	99	75.298	Seriola_lalandi_dorsalis
ENSPPYG00000005084	SBNO1	89	98.382	ENSSARG00000002594	SBNO1	89	98.382	Sorex_araneus
ENSPPYG00000005084	SBNO1	100	88.729	ENSSPUG00000012640	SBNO1	100	88.945	Sphenodon_punctatus
ENSPPYG00000005084	SBNO1	99	75.227	ENSSPAG00000016244	sbno1	99	74.948	Stegastes_partitus
ENSPPYG00000005084	SBNO1	100	97.845	ENSSSCG00000009776	SBNO1	100	97.845	Sus_scrofa
ENSPPYG00000005084	SBNO1	100	91.236	ENSTGUG00000005380	SBNO1	100	91.816	Taeniopygia_guttata
ENSPPYG00000005084	SBNO1	99	75.865	ENSTRUG00000018490	sbno1	99	76.003	Takifugu_rubripes
ENSPPYG00000005084	SBNO1	56	70.370	ENSTNIG00000013506	sbno1	99	70.968	Tetraodon_nigroviridis
ENSPPYG00000005084	SBNO1	100	97.846	ENSUAMG00000019671	SBNO1	100	97.846	Ursus_americanus
ENSPPYG00000005084	SBNO1	100	97.846	ENSUMAG00000004002	SBNO1	100	97.846	Ursus_maritimus
ENSPPYG00000005084	SBNO1	95	93.478	ENSVPAG00000007024	SBNO1	95	93.478	Vicugna_pacos
ENSPPYG00000005084	SBNO1	100	97.775	ENSVVUG00000027807	SBNO1	100	97.775	Vulpes_vulpes
ENSPPYG00000005084	SBNO1	99	82.038	ENSXETG00000031930	SBNO1	99	82.071	Xenopus_tropicalis
ENSPPYG00000005084	SBNO1	88	74.101	ENSXCOG00000011607	sbno1	95	74.678	Xiphophorus_couchianus
ENSPPYG00000005084	SBNO1	99	76.006	ENSXMAG00000002140	sbno1	99	75.913	Xiphophorus_maculatus