EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSPPYG00000005565 (Gene tree)
Gene ID: 100453495
Gene Symbol: APEX1
Alias: APE|APE-1|APEN|APEX|APX|HAP1|REF-1|REF1
Full Name: apurinic/apyrimidinic endodeoxyribonuclease 1
Gene Type: protein_coding
Species: Pongo_abelii
Status: putative
Strand: Plus strand
Length: 6737 bases
Position: chr14:19764085-19770821
Accession: 100453495
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPPYP00000006334	Exo_endo_phos	PF03372.23	5.4e-22	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPPYT00000006587	APEX1-201	5673	-	ENSPPYP00000006334	318 (aa)	XP_002824554	A0A2J8TT04

Gene Model

Click here to download ENSPPYG00000005565's gene model file

Pathways

Pathway ID	Pathway Name	Source
pon03410	Base excision repair	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPPYG00000005565's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPPYG00000005565	APEX1	100	98.428	ENSG00000100823	APEX1	100	98.630	Homo_sapiens
ENSPPYG00000005565	APEX1	88	69.176	ENSAPOG00000017002	apex1	91	69.176	Acanthochromis_polyacanthus
ENSPPYG00000005565	APEX1	100	95.597	ENSAMEG00000005418	APEX1	100	95.597	Ailuropoda_melanoleuca
ENSPPYG00000005565	APEX1	87	70.863	ENSACIG00000010653	apex1	94	70.968	Amphilophus_citrinellus
ENSPPYG00000005565	APEX1	88	69.176	ENSAOCG00000009649	apex1	90	69.176	Amphiprion_ocellaris
ENSPPYG00000005565	APEX1	88	69.176	ENSAPEG00000021453	apex1	90	69.176	Amphiprion_percula
ENSPPYG00000005565	APEX1	86	70.803	ENSATEG00000002883	apex1	97	66.772	Anabas_testudineus
ENSPPYG00000005565	APEX1	100	69.565	ENSACAG00000008099	APEX1	100	69.565	Anolis_carolinensis
ENSPPYG00000005565	APEX1	100	97.484	ENSANAG00000030117	APEX1	100	97.484	Aotus_nancymaae
ENSPPYG00000005565	APEX1	86	71.636	ENSACLG00000018441	apex1	99	65.723	Astatotilapia_calliptera
ENSPPYG00000005565	APEX1	100	65.312	ENSAMXG00000034699	apex1	100	65.000	Astyanax_mexicanus
ENSPPYG00000005565	APEX1	100	93.711	ENSBTAG00000002745	APEX1	100	93.711	Bos_taurus
ENSPPYG00000005565	APEX1	80	44.922	WBGene00001372	exo-3	88	44.922	Caenorhabditis_elegans
ENSPPYG00000005565	APEX1	100	98.113	ENSCJAG00000009726	APEX1	100	98.113	Callithrix_jacchus
ENSPPYG00000005565	APEX1	100	94.654	ENSCAFG00000032033	APEX1	100	94.654	Canis_familiaris
ENSPPYG00000005565	APEX1	54	91.860	ENSCAFG00020023002	-	96	91.860	Canis_lupus_dingo
ENSPPYG00000005565	APEX1	100	94.654	ENSCAFG00020014377	-	100	94.654	Canis_lupus_dingo
ENSPPYG00000005565	APEX1	98	74.679	ENSCHIG00000014537	-	99	74.679	Capra_hircus
ENSPPYG00000005565	APEX1	100	93.082	ENSCHIG00000007298	-	100	93.082	Capra_hircus
ENSPPYG00000005565	APEX1	100	94.654	ENSTSYG00000034813	APEX1	100	94.654	Carlito_syrichta
ENSPPYG00000005565	APEX1	85	88.192	ENSCAPG00000016235	APEX1	91	97.034	Cavia_aperea
ENSPPYG00000005565	APEX1	100	94.340	ENSCPOG00000030909	APEX1	100	94.340	Cavia_porcellus
ENSPPYG00000005565	APEX1	100	98.113	ENSCCAG00000033056	-	100	98.113	Cebus_capucinus
ENSPPYG00000005565	APEX1	100	84.591	ENSCCAG00000031931	-	100	84.591	Cebus_capucinus
ENSPPYG00000005565	APEX1	100	98.113	ENSCATG00000015580	APEX1	100	98.113	Cercocebus_atys
ENSPPYG00000005565	APEX1	100	94.654	ENSCLAG00000001002	APEX1	100	94.654	Chinchilla_lanigera
ENSPPYG00000005565	APEX1	100	97.799	ENSCSAG00000016670	-	100	97.799	Chlorocebus_sabaeus
ENSPPYG00000005565	APEX1	100	97.799	ENSCSAG00000016685	-	100	97.799	Chlorocebus_sabaeus
ENSPPYG00000005565	APEX1	100	72.414	ENSCPBG00000009567	APEX1	100	72.414	Chrysemys_picta_bellii
ENSPPYG00000005565	APEX1	93	53.465	ENSCING00000008137	-	84	58.113	Ciona_intestinalis
ENSPPYG00000005565	APEX1	83	51.698	ENSCSAVG00000007144	-	100	52.510	Ciona_savignyi
ENSPPYG00000005565	APEX1	100	98.113	ENSCANG00000030726	APEX1	100	98.113	Colobus_angolensis_palliatus
ENSPPYG00000005565	APEX1	100	92.138	ENSCGRG00001017046	Apex1	100	92.138	Cricetulus_griseus_chok1gshd
ENSPPYG00000005565	APEX1	100	92.138	ENSCGRG00000008984	Apex1	100	92.138	Cricetulus_griseus_crigri
ENSPPYG00000005565	APEX1	99	64.780	ENSCSEG00000017499	apex1	99	64.780	Cynoglossus_semilaevis
ENSPPYG00000005565	APEX1	88	70.609	ENSCVAG00000022075	apex1	99	65.506	Cyprinodon_variegatus
ENSPPYG00000005565	APEX1	100	65.409	ENSDARG00000045843	apex1	100	65.409	Danio_rerio
ENSPPYG00000005565	APEX1	100	89.308	ENSDNOG00000042234	APEX1	95	89.308	Dasypus_novemcinctus
ENSPPYG00000005565	APEX1	100	94.340	ENSDORG00000001616	Apex1	100	94.340	Dipodomys_ordii
ENSPPYG00000005565	APEX1	100	93.711	ENSETEG00000004855	-	100	93.711	Echinops_telfairi
ENSPPYG00000005565	APEX1	75	64.435	ENSEBUG00000000622	-	92	64.435	Eptatretus_burgeri
ENSPPYG00000005565	APEX1	100	96.226	ENSEASG00005017489	APEX1	74	96.226	Equus_asinus_asinus
ENSPPYG00000005565	APEX1	100	96.226	ENSECAG00000022325	APEX1	82	96.226	Equus_caballus
ENSPPYG00000005565	APEX1	91	92.708	ENSEEUG00000012569	APEX1	100	92.708	Erinaceus_europaeus
ENSPPYG00000005565	APEX1	100	64.890	ENSELUG00000021706	apex1	100	65.312	Esox_lucius
ENSPPYG00000005565	APEX1	100	96.226	ENSFCAG00000030869	APEX1	100	96.226	Felis_catus
ENSPPYG00000005565	APEX1	100	93.711	ENSFDAG00000006120	APEX1	100	93.711	Fukomys_damarensis
ENSPPYG00000005565	APEX1	99	67.089	ENSFHEG00000009031	apex1	83	67.089	Fundulus_heteroclitus
ENSPPYG00000005565	APEX1	99	61.635	ENSGMOG00000007943	apex1	99	61.129	Gadus_morhua
ENSPPYG00000005565	APEX1	99	67.089	ENSGAFG00000005311	apex1	99	67.089	Gambusia_affinis
ENSPPYG00000005565	APEX1	99	64.557	ENSGACG00000019497	apex1	99	68.797	Gasterosteus_aculeatus
ENSPPYG00000005565	APEX1	100	72.100	ENSGAGG00000014999	APEX1	100	72.100	Gopherus_agassizii
ENSPPYG00000005565	APEX1	100	98.742	ENSGGOG00000002128	APEX1	100	98.742	Gorilla_gorilla
ENSPPYG00000005565	APEX1	99	65.823	ENSHBUG00000005894	apex1	99	66.139	Haplochromis_burtoni
ENSPPYG00000005565	APEX1	100	94.340	ENSHGLG00000002848	APEX1	100	94.340	Heterocephalus_glaber_female
ENSPPYG00000005565	APEX1	100	94.340	ENSHGLG00100017878	APEX1	100	94.340	Heterocephalus_glaber_male
ENSPPYG00000005565	APEX1	99	66.458	ENSHCOG00000009961	apex1	99	65.723	Hippocampus_comes
ENSPPYG00000005565	APEX1	100	67.398	ENSIPUG00000005799	apex1	100	67.085	Ictalurus_punctatus
ENSPPYG00000005565	APEX1	100	94.025	ENSSTOG00000010096	APEX1	100	94.025	Ictidomys_tridecemlineatus
ENSPPYG00000005565	APEX1	100	80.189	ENSJJAG00000020465	-	96	84.228	Jaculus_jaculus
ENSPPYG00000005565	APEX1	100	94.025	ENSJJAG00000012067	-	100	94.025	Jaculus_jaculus
ENSPPYG00000005565	APEX1	100	84.277	ENSJJAG00000003660	-	100	84.277	Jaculus_jaculus
ENSPPYG00000005565	APEX1	88	70.968	ENSKMAG00000021171	apex1	99	65.823	Kryptolebias_marmoratus
ENSPPYG00000005565	APEX1	88	68.100	ENSLBEG00000010248	apex1	99	63.898	Labrus_bergylta
ENSPPYG00000005565	APEX1	100	67.296	ENSLACG00000008617	APEX1	100	67.296	Latimeria_chalumnae
ENSPPYG00000005565	APEX1	100	66.460	ENSLOCG00000015516	apex1	99	66.044	Lepisosteus_oculatus
ENSPPYG00000005565	APEX1	100	93.711	ENSLAFG00000021872	APEX1	100	93.711	Loxodonta_africana
ENSPPYG00000005565	APEX1	100	97.799	ENSMFAG00000002565	APEX1	100	97.799	Macaca_fascicularis
ENSPPYG00000005565	APEX1	100	98.113	ENSMMUG00000048039	APEX1	100	98.113	Macaca_mulatta
ENSPPYG00000005565	APEX1	100	98.113	ENSMNEG00000036944	APEX1	100	98.113	Macaca_nemestrina
ENSPPYG00000005565	APEX1	100	98.113	ENSMLEG00000042125	APEX1	100	98.113	Mandrillus_leucophaeus
ENSPPYG00000005565	APEX1	88	71.326	ENSMAMG00000023526	apex1	99	66.772	Mastacembelus_armatus
ENSPPYG00000005565	APEX1	86	71.636	ENSMZEG00005014187	apex1	99	65.723	Maylandia_zebra
ENSPPYG00000005565	APEX1	100	93.082	ENSMAUG00000013994	Apex1	100	93.082	Mesocricetus_auratus
ENSPPYG00000005565	APEX1	100	95.283	ENSMICG00000043554	APEX1	100	95.283	Microcebus_murinus
ENSPPYG00000005565	APEX1	100	91.824	ENSMOCG00000013721	Apex1	100	91.824	Microtus_ochrogaster
ENSPPYG00000005565	APEX1	88	67.143	ENSMMOG00000010031	apex1	87	67.143	Mola_mola
ENSPPYG00000005565	APEX1	100	83.125	ENSMODG00000007125	APEX1	100	83.125	Monodelphis_domestica
ENSPPYG00000005565	APEX1	88	63.799	ENSMALG00000011699	apex1	75	63.799	Monopterus_albus
ENSPPYG00000005565	APEX1	99	93.375	MGP_CAROLIEiJ_G0019209	Apex1	99	93.375	Mus_caroli
ENSPPYG00000005565	APEX1	100	94.025	ENSMUSG00000035960	Apex1	100	94.025	Mus_musculus
ENSPPYG00000005565	APEX1	100	94.025	MGP_PahariEiJ_G0030232	Apex1	100	94.025	Mus_pahari
ENSPPYG00000005565	APEX1	100	94.025	MGP_SPRETEiJ_G0020101	Apex1	100	94.025	Mus_spretus
ENSPPYG00000005565	APEX1	100	94.062	ENSMLUG00000028957	APEX1	100	94.062	Myotis_lucifugus
ENSPPYG00000005565	APEX1	88	76.703	ENSNGAG00000021748	-	86	76.703	Nannospalax_galili
ENSPPYG00000005565	APEX1	100	92.767	ENSNGAG00000002725	-	100	92.767	Nannospalax_galili
ENSPPYG00000005565	APEX1	86	71.273	ENSNBRG00000005334	apex1	91	65.409	Neolamprologus_brichardi
ENSPPYG00000005565	APEX1	100	98.113	ENSNLEG00000010839	APEX1	100	98.113	Nomascus_leucogenys
ENSPPYG00000005565	APEX1	100	86.478	ENSMEUG00000014519	APEX1	100	85.266	Notamacropus_eugenii
ENSPPYG00000005565	APEX1	100	93.396	ENSOPRG00000014029	APEX1	100	92.767	Ochotona_princeps
ENSPPYG00000005565	APEX1	100	71.914	ENSODEG00000006583	-	100	71.914	Octodon_degus
ENSPPYG00000005565	APEX1	97	75.405	ENSODEG00000004777	-	99	75.405	Octodon_degus
ENSPPYG00000005565	APEX1	100	94.654	ENSODEG00000001703	-	100	94.654	Octodon_degus
ENSPPYG00000005565	APEX1	87	71.583	ENSONIG00000012089	apex1	99	66.038	Oreochromis_niloticus
ENSPPYG00000005565	APEX1	90	82.456	ENSOANG00000008836	APEX1	80	77.160	Ornithorhynchus_anatinus
ENSPPYG00000005565	APEX1	100	94.340	ENSOCUG00000005022	APEX1	100	94.340	Oryctolagus_cuniculus
ENSPPYG00000005565	APEX1	99	66.352	ENSORLG00000012378	apex1	99	66.352	Oryzias_latipes
ENSPPYG00000005565	APEX1	99	66.352	ENSORLG00020021371	apex1	99	66.352	Oryzias_latipes_hni
ENSPPYG00000005565	APEX1	99	66.352	ENSORLG00015020089	apex1	99	66.352	Oryzias_latipes_hsok
ENSPPYG00000005565	APEX1	99	66.352	ENSOMEG00000018876	apex1	99	66.352	Oryzias_melastigma
ENSPPYG00000005565	APEX1	98	83.654	ENSOGAG00000029355	-	100	83.654	Otolemur_garnettii
ENSPPYG00000005565	APEX1	100	94.340	ENSOGAG00000013335	-	100	94.340	Otolemur_garnettii
ENSPPYG00000005565	APEX1	100	92.138	ENSOARG00000019740	-	100	92.138	Ovis_aries
ENSPPYG00000005565	APEX1	99	78.165	ENSOARG00000014424	-	100	78.165	Ovis_aries
ENSPPYG00000005565	APEX1	97	89.286	ENSOARG00000001876	-	100	89.286	Ovis_aries
ENSPPYG00000005565	APEX1	100	98.742	ENSPPAG00000038760	APEX1	100	98.742	Pan_paniscus
ENSPPYG00000005565	APEX1	100	96.226	ENSPPRG00000011794	APEX1	100	96.226	Panthera_pardus
ENSPPYG00000005565	APEX1	100	96.226	ENSPTIG00000014829	APEX1	100	96.226	Panthera_tigris_altaica
ENSPPYG00000005565	APEX1	100	98.742	ENSPTRG00000006093	APEX1	100	98.742	Pan_troglodytes
ENSPPYG00000005565	APEX1	100	98.113	ENSPANG00000022757	APEX1	100	98.113	Papio_anubis
ENSPPYG00000005565	APEX1	87	68.592	ENSPKIG00000003504	apex1	100	64.486	Paramormyrops_kingsleyae
ENSPPYG00000005565	APEX1	76	66.255	ENSPMGG00000016596	apex1	73	66.255	Periophthalmus_magnuspinnatus
ENSPPYG00000005565	APEX1	100	93.396	ENSPEMG00000019097	Apex1	100	93.396	Peromyscus_maniculatus_bairdii
ENSPPYG00000005565	APEX1	94	66.333	ENSPMAG00000007275	-	95	68.683	Petromyzon_marinus
ENSPPYG00000005565	APEX1	100	83.386	ENSPCIG00000023274	APEX1	100	83.489	Phascolarctos_cinereus
ENSPPYG00000005565	APEX1	88	71.685	ENSPFOG00000004178	apex1	99	66.772	Poecilia_formosa
ENSPPYG00000005565	APEX1	88	71.326	ENSPLAG00000012779	apex1	99	66.456	Poecilia_latipinna
ENSPPYG00000005565	APEX1	88	71.685	ENSPMEG00000019623	apex1	99	66.772	Poecilia_mexicana
ENSPPYG00000005565	APEX1	88	70.968	ENSPREG00000014298	apex1	99	66.139	Poecilia_reticulata
ENSPPYG00000005565	APEX1	100	91.824	ENSPCAG00000010376	APEX1	100	91.824	Procavia_capensis
ENSPPYG00000005565	APEX1	100	95.283	ENSPCOG00000021564	APEX1	100	95.283	Propithecus_coquereli
ENSPPYG00000005565	APEX1	100	95.938	ENSPVAG00000010736	APEX1	100	95.938	Pteropus_vampyrus
ENSPPYG00000005565	APEX1	86	71.636	ENSPNYG00000023940	apex1	99	65.723	Pundamilia_nyererei
ENSPPYG00000005565	APEX1	93	65.203	ENSPNAG00000020897	apex1	96	65.188	Pygocentrus_nattereri
ENSPPYG00000005565	APEX1	100	93.082	ENSRNOG00000009663	Apex1	100	93.082	Rattus_norvegicus
ENSPPYG00000005565	APEX1	100	98.113	ENSRBIG00000038325	APEX1	99	98.113	Rhinopithecus_bieti
ENSPPYG00000005565	APEX1	100	97.799	ENSSBOG00000018921	-	100	97.799	Saimiri_boliviensis_boliviensis
ENSPPYG00000005565	APEX1	100	82.390	ENSSBOG00000031372	-	100	81.905	Saimiri_boliviensis_boliviensis
ENSPPYG00000005565	APEX1	100	83.025	ENSSHAG00000013524	APEX1	100	83.025	Sarcophilus_harrisii
ENSPPYG00000005565	APEX1	87	66.065	ENSSFOG00015001948	apex1	100	61.635	Scleropages_formosus
ENSPPYG00000005565	APEX1	87	69.065	ENSSMAG00000013348	apex1	99	65.300	Scophthalmus_maximus
ENSPPYG00000005565	APEX1	88	69.176	ENSSDUG00000016377	apex1	99	64.557	Seriola_dumerili
ENSPPYG00000005565	APEX1	88	69.892	ENSSLDG00000023005	apex1	99	65.190	Seriola_lalandi_dorsalis
ENSPPYG00000005565	APEX1	89	73.239	ENSSPUG00000000531	APEX1	96	73.239	Sphenodon_punctatus
ENSPPYG00000005565	APEX1	88	69.534	ENSSPAG00000000458	apex1	99	64.557	Stegastes_partitus
ENSPPYG00000005565	APEX1	100	94.340	ENSSSCG00000040060	-	100	94.340	Sus_scrofa
ENSPPYG00000005565	APEX1	96	55.484	ENSSSCG00000039705	-	96	55.484	Sus_scrofa
ENSPPYG00000005565	APEX1	74	60.593	ENSTGUG00000014378	APEX1	100	60.593	Taeniopygia_guttata
ENSPPYG00000005565	APEX1	87	67.626	ENSTRUG00000004268	apex1	84	67.742	Takifugu_rubripes
ENSPPYG00000005565	APEX1	99	64.557	ENSTNIG00000005778	apex1	99	63.291	Tetraodon_nigroviridis
ENSPPYG00000005565	APEX1	100	91.824	ENSTBEG00000006405	APEX1	100	91.824	Tupaia_belangeri
ENSPPYG00000005565	APEX1	74	94.915	ENSTTRG00000007860	APEX1	100	94.915	Tursiops_truncatus
ENSPPYG00000005565	APEX1	100	95.283	ENSUAMG00000010457	APEX1	100	95.283	Ursus_americanus
ENSPPYG00000005565	APEX1	100	95.283	ENSUMAG00000009178	APEX1	100	95.283	Ursus_maritimus
ENSPPYG00000005565	APEX1	74	89.831	ENSVPAG00000005083	APEX1	100	89.831	Vicugna_pacos
ENSPPYG00000005565	APEX1	100	94.025	ENSVVUG00000009010	APEX1	100	94.025	Vulpes_vulpes
ENSPPYG00000005565	APEX1	100	66.254	ENSXETG00000024773	apex1	100	66.254	Xenopus_tropicalis
ENSPPYG00000005565	APEX1	88	71.326	ENSXCOG00000015233	apex1	99	66.456	Xiphophorus_couchianus
ENSPPYG00000005565	APEX1	100	66.352	ENSXMAG00000006195	apex1	99	66.456	Xiphophorus_maculatus