EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSPPYG00000005739 (Gene tree)
Gene ID: 100173929
Gene Symbol: SRP54
Alias: -
Full Name: signal recognition particle 54
Gene Type: protein_coding
Species: Pongo_abelii
Status: putative
Strand: Plus strand
Length: 31448 bases
Position: chr14:34737301-34768748
Accession: 11301
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPPYP00000006521	SRP54	PF00448.22	1.6e-78	1	1
ENSPPYP00000006521	SRP54_N	PF02881.19	2.5e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPPYT00000006778	SRP54-201	1963	-	ENSPPYP00000006521	504 (aa)	-	H2NL06

Gene Model

Click here to download ENSPPYG00000005739's gene model file

Pathways

Pathway ID	Pathway Name	Source
pon03060	Protein export	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPPYG00000005739's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPPYG00000005739	SRP54	100	94.841	ENSG00000100883	SRP54	100	100.000	Homo_sapiens
ENSPPYG00000005739	SRP54	100	90.873	ENSAPOG00000011314	srp54	100	90.873	Acanthochromis_polyacanthus
ENSPPYG00000005739	SRP54	100	94.841	ENSAMEG00000015544	SRP54	100	94.841	Ailuropoda_melanoleuca
ENSPPYG00000005739	SRP54	89	89.087	ENSACIG00000022831	srp54	97	89.087	Amphilophus_citrinellus
ENSPPYG00000005739	SRP54	100	90.873	ENSAOCG00000019401	srp54	100	90.873	Amphiprion_ocellaris
ENSPPYG00000005739	SRP54	100	90.873	ENSAPEG00000001977	srp54	100	90.873	Amphiprion_percula
ENSPPYG00000005739	SRP54	100	91.270	ENSATEG00000013877	srp54	100	91.270	Anabas_testudineus
ENSPPYG00000005739	SRP54	94	93.249	ENSAPLG00000010125	SRP54	95	93.249	Anas_platyrhynchos
ENSPPYG00000005739	SRP54	65	81.873	ENSACAG00000001124	-	100	81.873	Anolis_carolinensis
ENSPPYG00000005739	SRP54	100	93.452	ENSACAG00000002103	-	100	93.452	Anolis_carolinensis
ENSPPYG00000005739	SRP54	85	97.190	ENSACAG00000010631	-	99	97.190	Anolis_carolinensis
ENSPPYG00000005739	SRP54	100	94.841	ENSANAG00000022133	SRP54	100	94.841	Aotus_nancymaae
ENSPPYG00000005739	SRP54	100	91.071	ENSACLG00000015866	srp54	100	91.071	Astatotilapia_calliptera
ENSPPYG00000005739	SRP54	100	90.873	ENSAMXG00000032669	SRP54	100	90.873	Astyanax_mexicanus
ENSPPYG00000005739	SRP54	100	94.841	ENSBTAG00000019085	SRP54	100	94.841	Bos_taurus
ENSPPYG00000005739	SRP54	98	69.076	WBGene00009012	F21D5.7	100	69.076	Caenorhabditis_elegans
ENSPPYG00000005739	SRP54	100	94.841	ENSCJAG00000006581	SRP54	100	94.841	Callithrix_jacchus
ENSPPYG00000005739	SRP54	100	94.841	ENSCAFG00000013331	SRP54	100	94.841	Canis_familiaris
ENSPPYG00000005739	SRP54	100	94.841	ENSCAFG00020023427	SRP54	100	94.841	Canis_lupus_dingo
ENSPPYG00000005739	SRP54	100	94.841	ENSCHIG00000026345	SRP54	100	94.841	Capra_hircus
ENSPPYG00000005739	SRP54	94	85.053	ENSTSYG00000035333	-	93	85.053	Carlito_syrichta
ENSPPYG00000005739	SRP54	100	94.643	ENSTSYG00000002680	-	100	94.643	Carlito_syrichta
ENSPPYG00000005739	SRP54	94	62.857	ENSCAPG00000008780	SRP54	100	62.857	Cavia_aperea
ENSPPYG00000005739	SRP54	100	95.238	ENSCPOG00000003691	SRP54	100	95.238	Cavia_porcellus
ENSPPYG00000005739	SRP54	83	100.000	ENSCCAG00000024179	SRP54	100	100.000	Cebus_capucinus
ENSPPYG00000005739	SRP54	100	94.841	ENSCATG00000034083	SRP54	100	94.841	Cercocebus_atys
ENSPPYG00000005739	SRP54	100	94.841	ENSCLAG00000015076	SRP54	100	94.841	Chinchilla_lanigera
ENSPPYG00000005739	SRP54	100	94.841	ENSCSAG00000015575	SRP54	100	94.841	Chlorocebus_sabaeus
ENSPPYG00000005739	SRP54	95	82.536	ENSCHOG00000008986	SRP54	100	82.536	Choloepus_hoffmanni
ENSPPYG00000005739	SRP54	100	94.048	ENSCPBG00000026195	SRP54	100	94.048	Chrysemys_picta_bellii
ENSPPYG00000005739	SRP54	100	77.579	ENSCING00000007380	-	100	77.579	Ciona_intestinalis
ENSPPYG00000005739	SRP54	100	94.841	ENSCANG00000028532	SRP54	100	94.841	Colobus_angolensis_palliatus
ENSPPYG00000005739	SRP54	100	94.444	ENSCGRG00001009525	-	100	94.444	Cricetulus_griseus_chok1gshd
ENSPPYG00000005739	SRP54	76	92.727	ENSCGRG00000009453	-	89	92.727	Cricetulus_griseus_crigri
ENSPPYG00000005739	SRP54	100	90.079	ENSCSEG00000012392	srp54	100	90.079	Cynoglossus_semilaevis
ENSPPYG00000005739	SRP54	100	90.873	ENSCVAG00000010395	srp54	100	90.873	Cyprinodon_variegatus
ENSPPYG00000005739	SRP54	100	91.270	ENSDARG00000098367	srp54	100	91.270	Danio_rerio
ENSPPYG00000005739	SRP54	100	94.841	ENSDNOG00000032525	SRP54	100	94.841	Dasypus_novemcinctus
ENSPPYG00000005739	SRP54	89	79.241	ENSDORG00000005159	-	97	79.241	Dipodomys_ordii
ENSPPYG00000005739	SRP54	96	73.608	FBgn0010747	Srp54k	98	73.293	Drosophila_melanogaster
ENSPPYG00000005739	SRP54	83	58.373	ENSETEG00000012102	-	99	58.373	Echinops_telfairi
ENSPPYG00000005739	SRP54	100	93.651	ENSETEG00000016307	-	100	93.651	Echinops_telfairi
ENSPPYG00000005739	SRP54	100	82.937	ENSEBUG00000009437	-	100	82.937	Eptatretus_burgeri
ENSPPYG00000005739	SRP54	100	94.841	ENSEASG00005002057	SRP54	100	94.841	Equus_asinus_asinus
ENSPPYG00000005739	SRP54	99	94.578	ENSECAG00000018042	SRP54	98	94.578	Equus_caballus
ENSPPYG00000005739	SRP54	100	78.373	ENSEEUG00000001511	SRP54	100	78.373	Erinaceus_europaeus
ENSPPYG00000005739	SRP54	100	90.476	ENSELUG00000003395	srp54	100	90.476	Esox_lucius
ENSPPYG00000005739	SRP54	100	94.643	ENSFCAG00000032033	SRP54	100	94.643	Felis_catus
ENSPPYG00000005739	SRP54	100	93.651	ENSFALG00000005995	SRP54	100	93.651	Ficedula_albicollis
ENSPPYG00000005739	SRP54	100	94.841	ENSFDAG00000016767	SRP54	100	94.841	Fukomys_damarensis
ENSPPYG00000005739	SRP54	100	90.675	ENSFHEG00000004263	srp54	100	90.675	Fundulus_heteroclitus
ENSPPYG00000005739	SRP54	95	85.146	ENSGMOG00000011391	srp54	100	85.146	Gadus_morhua
ENSPPYG00000005739	SRP54	100	93.651	ENSGALG00000023135	SRP54	100	93.651	Gallus_gallus
ENSPPYG00000005739	SRP54	100	91.071	ENSGAFG00000011586	srp54	100	91.071	Gambusia_affinis
ENSPPYG00000005739	SRP54	100	90.675	ENSGACG00000004181	srp54	100	90.675	Gasterosteus_aculeatus
ENSPPYG00000005739	SRP54	100	94.048	ENSGAGG00000014766	SRP54	100	94.048	Gopherus_agassizii
ENSPPYG00000005739	SRP54	100	94.841	ENSGGOG00000002926	SRP54	100	94.841	Gorilla_gorilla
ENSPPYG00000005739	SRP54	100	91.071	ENSHBUG00000005678	srp54	100	91.071	Haplochromis_burtoni
ENSPPYG00000005739	SRP54	100	94.841	ENSHGLG00000002850	SRP54	100	94.841	Heterocephalus_glaber_female
ENSPPYG00000005739	SRP54	100	66.139	ENSHGLG00100007281	-	100	66.139	Heterocephalus_glaber_male
ENSPPYG00000005739	SRP54	100	94.841	ENSHGLG00100005263	SRP54	100	94.841	Heterocephalus_glaber_male
ENSPPYG00000005739	SRP54	100	89.286	ENSHCOG00000021127	srp54	100	89.286	Hippocampus_comes
ENSPPYG00000005739	SRP54	100	90.476	ENSIPUG00000001420	srp54	100	90.476	Ictalurus_punctatus
ENSPPYG00000005739	SRP54	100	94.841	ENSSTOG00000016023	SRP54	100	94.841	Ictidomys_tridecemlineatus
ENSPPYG00000005739	SRP54	84	75.650	ENSJJAG00000016404	-	95	75.650	Jaculus_jaculus
ENSPPYG00000005739	SRP54	100	89.683	ENSJJAG00000013417	-	100	89.683	Jaculus_jaculus
ENSPPYG00000005739	SRP54	100	90.476	ENSKMAG00000007707	srp54	100	90.476	Kryptolebias_marmoratus
ENSPPYG00000005739	SRP54	100	90.873	ENSLBEG00000018690	srp54	100	90.873	Labrus_bergylta
ENSPPYG00000005739	SRP54	100	90.873	ENSLBEG00000021122	srp54	100	90.873	Labrus_bergylta
ENSPPYG00000005739	SRP54	100	91.071	ENSLACG00000017890	SRP54	100	91.071	Latimeria_chalumnae
ENSPPYG00000005739	SRP54	100	91.865	ENSLOCG00000009440	srp54	100	91.865	Lepisosteus_oculatus
ENSPPYG00000005739	SRP54	100	94.841	ENSLAFG00000012007	SRP54	100	94.841	Loxodonta_africana
ENSPPYG00000005739	SRP54	100	94.841	ENSMFAG00000044371	SRP54	100	94.841	Macaca_fascicularis
ENSPPYG00000005739	SRP54	100	94.841	ENSMMUG00000015073	FAM177A1	100	94.841	Macaca_mulatta
ENSPPYG00000005739	SRP54	100	94.841	ENSMNEG00000006947	SRP54	100	94.841	Macaca_nemestrina
ENSPPYG00000005739	SRP54	100	94.841	ENSMLEG00000042251	SRP54	100	94.841	Mandrillus_leucophaeus
ENSPPYG00000005739	SRP54	100	91.071	ENSMAMG00000004803	srp54	100	91.071	Mastacembelus_armatus
ENSPPYG00000005739	SRP54	100	91.071	ENSMZEG00005027528	srp54	100	91.071	Maylandia_zebra
ENSPPYG00000005739	SRP54	100	93.281	ENSMGAG00000012481	SRP54	100	93.281	Meleagris_gallopavo
ENSPPYG00000005739	SRP54	100	94.643	ENSMAUG00000014447	-	100	94.643	Mesocricetus_auratus
ENSPPYG00000005739	SRP54	100	94.841	ENSMICG00000010270	SRP54	100	94.841	Microcebus_murinus
ENSPPYG00000005739	SRP54	84	99.291	ENSMOCG00000000948	-	96	99.291	Microtus_ochrogaster
ENSPPYG00000005739	SRP54	89	88.591	ENSMMOG00000020303	srp54	98	88.591	Mola_mola
ENSPPYG00000005739	SRP54	100	94.643	ENSMODG00000012925	-	100	94.643	Monodelphis_domestica
ENSPPYG00000005739	SRP54	100	94.643	ENSMODG00000023150	-	100	94.643	Monodelphis_domestica
ENSPPYG00000005739	SRP54	89	89.062	ENSMALG00000009163	srp54	99	89.062	Monopterus_albus
ENSPPYG00000005739	SRP54	100	94.643	MGP_CAROLIEiJ_G0017754	-	100	94.643	Mus_caroli
ENSPPYG00000005739	SRP54	100	94.643	ENSMUSG00000073079	Srp54a	100	94.643	Mus_musculus
ENSPPYG00000005739	SRP54	100	94.643	ENSMUSG00000112449	Srp54b	100	94.643	Mus_musculus
ENSPPYG00000005739	SRP54	100	93.849	ENSMUSG00000079108	Srp54c	100	93.849	Mus_musculus
ENSPPYG00000005739	SRP54	100	94.643	MGP_PahariEiJ_G0029510	-	100	94.643	Mus_pahari
ENSPPYG00000005739	SRP54	100	94.841	ENSMPUG00000016302	SRP54	100	94.841	Mustela_putorius_furo
ENSPPYG00000005739	SRP54	100	94.246	ENSMLUG00000008958	SRP54	100	94.246	Myotis_lucifugus
ENSPPYG00000005739	SRP54	100	84.722	ENSNGAG00000019806	-	100	84.722	Nannospalax_galili
ENSPPYG00000005739	SRP54	84	95.272	ENSNBRG00000006000	srp54	96	95.272	Neolamprologus_brichardi
ENSPPYG00000005739	SRP54	100	94.841	ENSNLEG00000003496	SRP54	100	94.841	Nomascus_leucogenys
ENSPPYG00000005739	SRP54	67	100.000	ENSMEUG00000000138	-	76	100.000	Notamacropus_eugenii
ENSPPYG00000005739	SRP54	58	100.000	ENSOPRG00000014502	-	60	100.000	Ochotona_princeps
ENSPPYG00000005739	SRP54	100	94.841	ENSODEG00000004865	SRP54	100	94.841	Octodon_degus
ENSPPYG00000005739	SRP54	100	91.071	ENSONIG00000011768	srp54	100	91.071	Oreochromis_niloticus
ENSPPYG00000005739	SRP54	100	94.841	ENSOANG00000014051	SRP54	100	94.841	Ornithorhynchus_anatinus
ENSPPYG00000005739	SRP54	100	94.246	ENSOCUG00000007838	SRP54	100	94.246	Oryctolagus_cuniculus
ENSPPYG00000005739	SRP54	100	91.071	ENSORLG00000010027	srp54	100	91.071	Oryzias_latipes
ENSPPYG00000005739	SRP54	100	91.071	ENSORLG00020001878	srp54	100	91.071	Oryzias_latipes_hni
ENSPPYG00000005739	SRP54	100	91.071	ENSORLG00015021866	srp54	100	91.071	Oryzias_latipes_hsok
ENSPPYG00000005739	SRP54	100	90.873	ENSOMEG00000020952	srp54	100	90.873	Oryzias_melastigma
ENSPPYG00000005739	SRP54	100	94.841	ENSOGAG00000012188	SRP54	100	94.841	Otolemur_garnettii
ENSPPYG00000005739	SRP54	100	94.841	ENSOARG00000007160	SRP54	100	94.841	Ovis_aries
ENSPPYG00000005739	SRP54	100	94.841	ENSPPAG00000017434	SRP54	100	94.841	Pan_paniscus
ENSPPYG00000005739	SRP54	100	93.651	ENSPPRG00000014047	SRP54	100	93.651	Panthera_pardus
ENSPPYG00000005739	SRP54	100	94.643	ENSPTIG00000000744	SRP54	96	94.643	Panthera_tigris_altaica
ENSPPYG00000005739	SRP54	100	94.841	ENSPTRG00000006259	FAM177A1	100	94.841	Pan_troglodytes
ENSPPYG00000005739	SRP54	100	94.841	ENSPANG00000023853	SRP54	100	94.841	Papio_anubis
ENSPPYG00000005739	SRP54	100	90.873	ENSPKIG00000001953	srp54	100	90.873	Paramormyrops_kingsleyae
ENSPPYG00000005739	SRP54	100	93.849	ENSPSIG00000006476	SRP54	100	93.849	Pelodiscus_sinensis
ENSPPYG00000005739	SRP54	91	87.609	ENSPMGG00000004127	srp54	99	87.609	Periophthalmus_magnuspinnatus
ENSPPYG00000005739	SRP54	100	81.746	ENSPEMG00000019634	-	100	81.746	Peromyscus_maniculatus_bairdii
ENSPPYG00000005739	SRP54	100	83.929	ENSPMAG00000006078	-	100	83.929	Petromyzon_marinus
ENSPPYG00000005739	SRP54	100	94.643	ENSPCIG00000016175	SRP54	100	94.643	Phascolarctos_cinereus
ENSPPYG00000005739	SRP54	100	91.071	ENSPFOG00000008870	srp54	100	91.071	Poecilia_formosa
ENSPPYG00000005739	SRP54	100	91.071	ENSPLAG00000009889	srp54	100	91.071	Poecilia_latipinna
ENSPPYG00000005739	SRP54	100	91.071	ENSPMEG00000008601	srp54	100	91.071	Poecilia_mexicana
ENSPPYG00000005739	SRP54	100	91.071	ENSPREG00000004505	srp54	100	91.071	Poecilia_reticulata
ENSPPYG00000005739	SRP54	100	90.675	ENSPCAG00000006268	SRP54	100	90.675	Procavia_capensis
ENSPPYG00000005739	SRP54	100	92.871	ENSPCOG00000022473	SRP54	100	92.871	Propithecus_coquereli
ENSPPYG00000005739	SRP54	63	100.000	ENSPVAG00000010056	SRP54	82	100.000	Pteropus_vampyrus
ENSPPYG00000005739	SRP54	100	91.071	ENSPNYG00000009717	srp54	100	91.071	Pundamilia_nyererei
ENSPPYG00000005739	SRP54	100	91.071	ENSPNAG00000008544	srp54	100	91.071	Pygocentrus_nattereri
ENSPPYG00000005739	SRP54	100	94.444	ENSRNOG00000032776	Srp54a	100	94.444	Rattus_norvegicus
ENSPPYG00000005739	SRP54	100	94.841	ENSRROG00000041292	SRP54	100	94.841	Rhinopithecus_roxellana
ENSPPYG00000005739	SRP54	86	51.701	YPR088C	SRP54	95	47.126	Saccharomyces_cerevisiae
ENSPPYG00000005739	SRP54	94	94.515	ENSSBOG00000035145	SRP54	100	94.515	Saimiri_boliviensis_boliviensis
ENSPPYG00000005739	SRP54	68	100.000	ENSSHAG00000000671	SRP54	100	100.000	Sarcophilus_harrisii
ENSPPYG00000005739	SRP54	100	91.468	ENSSFOG00015013920	srp54	100	91.468	Scleropages_formosus
ENSPPYG00000005739	SRP54	100	85.393	ENSSMAG00000002441	srp54	100	85.393	Scophthalmus_maximus
ENSPPYG00000005739	SRP54	100	90.675	ENSSDUG00000018586	srp54	100	90.675	Seriola_dumerili
ENSPPYG00000005739	SRP54	100	90.476	ENSSLDG00000010476	srp54	100	90.476	Seriola_lalandi_dorsalis
ENSPPYG00000005739	SRP54	100	94.841	ENSSARG00000002744	SRP54	100	94.841	Sorex_araneus
ENSPPYG00000005739	SRP54	100	94.048	ENSSPUG00000013101	SRP54	100	94.048	Sphenodon_punctatus
ENSPPYG00000005739	SRP54	100	90.873	ENSSPAG00000002354	srp54	100	90.873	Stegastes_partitus
ENSPPYG00000005739	SRP54	100	94.841	ENSSSCG00000001955	SRP54	100	94.841	Sus_scrofa
ENSPPYG00000005739	SRP54	94	93.249	ENSTGUG00000011945	-	95	93.249	Taeniopygia_guttata
ENSPPYG00000005739	SRP54	100	90.278	ENSTRUG00000007057	srp54	100	90.278	Takifugu_rubripes
ENSPPYG00000005739	SRP54	100	89.881	ENSTNIG00000002589	srp54	100	89.881	Tetraodon_nigroviridis
ENSPPYG00000005739	SRP54	84	90.780	ENSTBEG00000011409	SRP54	95	90.780	Tupaia_belangeri
ENSPPYG00000005739	SRP54	100	84.722	ENSTTRG00000000928	SRP54	100	84.722	Tursiops_truncatus
ENSPPYG00000005739	SRP54	52	90.076	ENSUAMG00000012385	SRP54	100	90.076	Ursus_americanus
ENSPPYG00000005739	SRP54	100	94.841	ENSUMAG00000011234	SRP54	100	94.841	Ursus_maritimus
ENSPPYG00000005739	SRP54	94	94.304	ENSVPAG00000005668	SRP54	100	94.304	Vicugna_pacos
ENSPPYG00000005739	SRP54	100	94.841	ENSVVUG00000019962	SRP54	100	94.841	Vulpes_vulpes
ENSPPYG00000005739	SRP54	100	77.120	ENSXETG00000012290	srp54	100	77.148	Xenopus_tropicalis
ENSPPYG00000005739	SRP54	88	90.293	ENSXCOG00000004658	srp54	96	90.293	Xiphophorus_couchianus
ENSPPYG00000005739	SRP54	100	91.071	ENSXMAG00000018315	srp54	100	91.071	Xiphophorus_maculatus