EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPPYG00000007053 (Gene tree)
Gene ID: -
Gene Symbol: SRL
Alias: SAR
Full Name: sarcalumenin
Gene Type: protein_coding
Species: Pongo_abelii
Status: putative
Strand: Minus strand
Length: 54180 bases
Position: chr16:4317423-4371602
Accession: 11295
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPPYP00000007977	MMR_HSR1	PF01926.23	5.7e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPPYT00000008308	SRL-201	4828	-	ENSPPYP00000007977	429 (aa)	-	H2NQ00

Gene Model

Click here to download ENSPPYG00000007053's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPPYG00000007053's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPPYG00000007053	SRL	67	35.986	ENSPPYG00000006387	EHD4	53	35.986
ENSPPYG00000007053	SRL	86	33.602	ENSPPYG00000003093	EHD1	68	33.602
ENSPPYG00000007053	SRL	93	32.080	ENSPPYG00000010180	EHD2	63	32.234
ENSPPYG00000007053	SRL	81	33.429	ENSPPYG00000012514	EHD3	69	33.511

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPPYG00000007053	SRL	98	100.000	ENSG00000185739	SRL	97	100.000	Homo_sapiens
ENSPPYG00000007053	SRL	98	84.964	ENSAPOG00000018093	srl	94	84.964	Acanthochromis_polyacanthus
ENSPPYG00000007053	SRL	100	76.047	ENSAPOG00000012432	SRL	96	74.483	Acanthochromis_polyacanthus
ENSPPYG00000007053	SRL	98	76.611	ENSACIG00000015419	SRL	93	76.611	Amphilophus_citrinellus
ENSPPYG00000007053	SRL	98	84.726	ENSACIG00000015799	srl	93	84.726	Amphilophus_citrinellus
ENSPPYG00000007053	SRL	98	85.203	ENSAOCG00000007574	srl	97	85.203	Amphiprion_ocellaris
ENSPPYG00000007053	SRL	100	75.638	ENSAOCG00000017049	SRL	94	75.638	Amphiprion_ocellaris
ENSPPYG00000007053	SRL	98	85.203	ENSAPEG00000006911	srl	89	85.203	Amphiprion_percula
ENSPPYG00000007053	SRL	100	71.628	ENSAPEG00000006533	SRL	94	71.628	Amphiprion_percula
ENSPPYG00000007053	SRL	98	84.964	ENSATEG00000024315	srl	89	84.964	Anabas_testudineus
ENSPPYG00000007053	SRL	98	74.537	ENSATEG00000009643	SRL	50	73.611	Anabas_testudineus
ENSPPYG00000007053	SRL	98	90.487	ENSACAG00000016380	SRL	79	90.487	Anolis_carolinensis
ENSPPYG00000007053	SRL	98	73.611	ENSACLG00000024674	SRL	55	72.794	Astatotilapia_calliptera
ENSPPYG00000007053	SRL	98	84.726	ENSACLG00000027685	srl	92	84.726	Astatotilapia_calliptera
ENSPPYG00000007053	SRL	91	79.540	ENSAMXG00000038693	SRL	95	74.825	Astyanax_mexicanus
ENSPPYG00000007053	SRL	97	85.407	ENSAMXG00000018789	srl	82	85.407	Astyanax_mexicanus
ENSPPYG00000007053	SRL	97	97.362	ENSBTAG00000001078	SRL	53	97.362	Bos_taurus
ENSPPYG00000007053	SRL	98	99.284	ENSCJAG00000019750	SRL	89	99.284	Callithrix_jacchus
ENSPPYG00000007053	SRL	98	98.329	ENSCAFG00000019233	SRL	78	98.329	Canis_familiaris
ENSPPYG00000007053	SRL	97	98.565	ENSCAFG00020025024	SRL	51	98.565	Canis_lupus_dingo
ENSPPYG00000007053	SRL	97	97.362	ENSCHIG00000017927	SRL	52	97.362	Capra_hircus
ENSPPYG00000007053	SRL	98	98.807	ENSTSYG00000007919	SRL	97	98.807	Carlito_syrichta
ENSPPYG00000007053	SRL	98	98.568	ENSCPOG00000012643	SRL	89	98.568	Cavia_porcellus
ENSPPYG00000007053	SRL	94	96.774	ENSCCAG00000032646	SRL	100	99.472	Cebus_capucinus
ENSPPYG00000007053	SRL	98	100.000	ENSCATG00000032227	-	89	100.000	Cercocebus_atys
ENSPPYG00000007053	SRL	98	98.329	ENSCLAG00000016242	SRL	89	98.329	Chinchilla_lanigera
ENSPPYG00000007053	SRL	90	97.662	ENSCHOG00000001618	SRL	52	97.662	Choloepus_hoffmanni
ENSPPYG00000007053	SRL	97	93.541	ENSCPBG00000026371	SRL	89	90.930	Chrysemys_picta_bellii
ENSPPYG00000007053	SRL	91	62.595	ENSCING00000005231	-	85	62.827	Ciona_intestinalis
ENSPPYG00000007053	SRL	98	100.000	ENSCANG00000035872	SRL	97	100.000	Colobus_angolensis_palliatus
ENSPPYG00000007053	SRL	98	97.852	ENSCGRG00001016630	Srl	89	97.852	Cricetulus_griseus_chok1gshd
ENSPPYG00000007053	SRL	98	97.852	ENSCGRG00000005458	Srl	89	97.852	Cricetulus_griseus_crigri
ENSPPYG00000007053	SRL	98	73.571	ENSCSEG00000011866	SRL	84	73.571	Cynoglossus_semilaevis
ENSPPYG00000007053	SRL	98	84.726	ENSCSEG00000016151	srl	90	84.726	Cynoglossus_semilaevis
ENSPPYG00000007053	SRL	98	75.991	ENSCVAG00000022465	SRL	57	75.058	Cyprinodon_variegatus
ENSPPYG00000007053	SRL	98	85.476	ENSCVAG00000003513	srl	91	85.476	Cyprinodon_variegatus
ENSPPYG00000007053	SRL	98	86.158	ENSDARG00000104587	srl	89	86.158	Danio_rerio
ENSPPYG00000007053	SRL	88	76.562	ENSDARG00000112959	CABZ01072309.1	100	76.562	Danio_rerio
ENSPPYG00000007053	SRL	98	98.807	ENSDNOG00000011643	SRL	50	98.807	Dasypus_novemcinctus
ENSPPYG00000007053	SRL	98	97.136	ENSDORG00000014807	Srl	89	97.136	Dipodomys_ordii
ENSPPYG00000007053	SRL	85	65.508	ENSEBUG00000015937	srl	88	67.816	Eptatretus_burgeri
ENSPPYG00000007053	SRL	97	98.082	ENSEASG00005000942	SRL	50	98.082	Equus_asinus_asinus
ENSPPYG00000007053	SRL	99	96.934	ENSECAG00000024219	SRL	88	97.847	Equus_caballus
ENSPPYG00000007053	SRL	98	84.524	ENSELUG00000015616	srl	89	82.407	Esox_lucius
ENSPPYG00000007053	SRL	98	97.613	ENSFCAG00000022075	SRL	89	97.613	Felis_catus
ENSPPYG00000007053	SRL	97	92.584	ENSFALG00000004328	SRL	59	92.584	Ficedula_albicollis
ENSPPYG00000007053	SRL	98	98.568	ENSFDAG00000006199	SRL	89	98.568	Fukomys_damarensis
ENSPPYG00000007053	SRL	100	75.116	ENSFHEG00000011854	SRL	96	76.047	Fundulus_heteroclitus
ENSPPYG00000007053	SRL	98	84.248	ENSFHEG00000011239	srl	90	84.248	Fundulus_heteroclitus
ENSPPYG00000007053	SRL	97	83.023	ENSGMOG00000014954	srl	95	83.023	Gadus_morhua
ENSPPYG00000007053	SRL	97	92.344	ENSGALG00000038884	SRL	89	92.344	Gallus_gallus
ENSPPYG00000007053	SRL	100	75.814	ENSGAFG00000016984	SRL	96	75.814	Gambusia_affinis
ENSPPYG00000007053	SRL	98	84.726	ENSGAFG00000000010	srl	91	84.726	Gambusia_affinis
ENSPPYG00000007053	SRL	97	82.326	ENSGACG00000011332	srl	95	82.326	Gasterosteus_aculeatus
ENSPPYG00000007053	SRL	98	100.000	ENSGGOG00000011312	-	89	100.000	Gorilla_gorilla
ENSPPYG00000007053	SRL	98	73.380	ENSHBUG00000015710	SRL	54	73.380	Haplochromis_burtoni
ENSPPYG00000007053	SRL	98	84.726	ENSHBUG00000007581	srl	92	84.726	Haplochromis_burtoni
ENSPPYG00000007053	SRL	98	98.807	ENSHGLG00000015271	SRL	89	98.807	Heterocephalus_glaber_female
ENSPPYG00000007053	SRL	98	98.807	ENSHGLG00100019378	SRL	89	98.807	Heterocephalus_glaber_male
ENSPPYG00000007053	SRL	98	84.726	ENSHCOG00000008687	srl	93	84.726	Hippocampus_comes
ENSPPYG00000007053	SRL	96	71.429	ENSIPUG00000011609	SRL	90	70.218	Ictalurus_punctatus
ENSPPYG00000007053	SRL	98	84.248	ENSIPUG00000012513	srl	90	84.248	Ictalurus_punctatus
ENSPPYG00000007053	SRL	98	98.329	ENSSTOG00000021151	-	89	98.329	Ictidomys_tridecemlineatus
ENSPPYG00000007053	SRL	98	97.613	ENSJJAG00000016400	Srl	89	97.613	Jaculus_jaculus
ENSPPYG00000007053	SRL	100	76.047	ENSKMAG00000019537	SRL	97	76.047	Kryptolebias_marmoratus
ENSPPYG00000007053	SRL	99	84.198	ENSKMAG00000014115	srl	94	84.198	Kryptolebias_marmoratus
ENSPPYG00000007053	SRL	98	84.248	ENSLBEG00000026643	srl	89	84.248	Labrus_bergylta
ENSPPYG00000007053	SRL	98	76.667	ENSLBEG00000013811	SRL	91	76.429	Labrus_bergylta
ENSPPYG00000007053	SRL	98	87.351	ENSLACG00000002825	SRL	93	87.351	Latimeria_chalumnae
ENSPPYG00000007053	SRL	98	86.396	ENSLOCG00000002644	srl	89	86.396	Lepisosteus_oculatus
ENSPPYG00000007053	SRL	98	100.000	ENSMFAG00000037383	SRL	97	100.000	Macaca_fascicularis
ENSPPYG00000007053	SRL	98	100.000	ENSMNEG00000019236	-	89	100.000	Macaca_nemestrina
ENSPPYG00000007053	SRL	94	95.050	ENSMLEG00000032156	SRL	91	95.050	Mandrillus_leucophaeus
ENSPPYG00000007053	SRL	98	85.203	ENSMAMG00000023322	srl	89	85.203	Mastacembelus_armatus
ENSPPYG00000007053	SRL	98	75.000	ENSMAMG00000013756	SRL	50	74.885	Mastacembelus_armatus
ENSPPYG00000007053	SRL	98	84.726	ENSMZEG00005004548	srl	92	84.726	Maylandia_zebra
ENSPPYG00000007053	SRL	98	73.611	ENSMZEG00005004010	SRL	54	72.454	Maylandia_zebra
ENSPPYG00000007053	SRL	97	92.344	ENSMGAG00000009342	SRL	87	94.752	Meleagris_gallopavo
ENSPPYG00000007053	SRL	98	97.375	ENSMICG00000032307	SRL	89	97.375	Microcebus_murinus
ENSPPYG00000007053	SRL	98	97.613	ENSMOCG00000008208	Srl	89	97.613	Microtus_ochrogaster
ENSPPYG00000007053	SRL	98	73.963	ENSMMOG00000021572	SRL	95	73.963	Mola_mola
ENSPPYG00000007053	SRL	98	84.248	ENSMMOG00000013970	srl	93	84.248	Mola_mola
ENSPPYG00000007053	SRL	98	76.010	ENSMALG00000000670	SRL	98	75.059	Monopterus_albus
ENSPPYG00000007053	SRL	98	84.487	ENSMALG00000005039	srl	93	84.487	Monopterus_albus
ENSPPYG00000007053	SRL	98	97.375	MGP_CAROLIEiJ_G0020400	Srl	89	97.375	Mus_caroli
ENSPPYG00000007053	SRL	98	97.375	ENSMUSG00000022519	Srl	89	97.375	Mus_musculus
ENSPPYG00000007053	SRL	98	97.375	MGP_SPRETEiJ_G0021294	Srl	89	97.375	Mus_spretus
ENSPPYG00000007053	SRL	97	98.565	ENSMPUG00000015025	SRL	51	98.565	Mustela_putorius_furo
ENSPPYG00000007053	SRL	98	97.375	ENSMLUG00000030733	SRL	53	97.375	Myotis_lucifugus
ENSPPYG00000007053	SRL	98	97.375	ENSNGAG00000019741	Srl	89	97.375	Nannospalax_galili
ENSPPYG00000007053	SRL	98	84.726	ENSNBRG00000023775	srl	89	84.726	Neolamprologus_brichardi
ENSPPYG00000007053	SRL	100	72.172	ENSNBRG00000002422	SRL	56	72.454	Neolamprologus_brichardi
ENSPPYG00000007053	SRL	94	96.535	ENSNLEG00000029051	SRL	92	96.535	Nomascus_leucogenys
ENSPPYG00000007053	SRL	98	98.329	ENSODEG00000013256	SRL	89	98.329	Octodon_degus
ENSPPYG00000007053	SRL	98	84.964	ENSONIG00000005192	srl	89	84.964	Oreochromis_niloticus
ENSPPYG00000007053	SRL	99	74.766	ENSORLG00000015064	SRL	94	74.766	Oryzias_latipes
ENSPPYG00000007053	SRL	98	84.487	ENSORLG00000008291	srl	92	84.794	Oryzias_latipes
ENSPPYG00000007053	SRL	99	75.000	ENSORLG00020018173	SRL	94	75.000	Oryzias_latipes_hni
ENSPPYG00000007053	SRL	98	84.248	ENSORLG00020019784	srl	79	84.536	Oryzias_latipes_hni
ENSPPYG00000007053	SRL	99	75.234	ENSORLG00015019063	SRL	94	75.234	Oryzias_latipes_hsok
ENSPPYG00000007053	SRL	98	83.771	ENSORLG00015009342	srl	86	83.771	Oryzias_latipes_hsok
ENSPPYG00000007053	SRL	98	84.248	ENSOMEG00000010006	srl	93	84.248	Oryzias_melastigma
ENSPPYG00000007053	SRL	99	73.016	ENSOMEG00000005682	SRL	51	72.912	Oryzias_melastigma
ENSPPYG00000007053	SRL	98	96.659	ENSOGAG00000029266	SRL	51	96.659	Otolemur_garnettii
ENSPPYG00000007053	SRL	97	97.362	ENSOARG00000003074	SRL	52	97.362	Ovis_aries
ENSPPYG00000007053	SRL	98	99.761	ENSPPAG00000024919	-	97	99.761	Pan_paniscus
ENSPPYG00000007053	SRL	98	97.852	ENSPPRG00000010274	SRL	97	97.852	Panthera_pardus
ENSPPYG00000007053	SRL	98	97.852	ENSPTIG00000015162	SRL	97	97.852	Panthera_tigris_altaica
ENSPPYG00000007053	SRL	98	99.761	ENSPTRG00000007712	SRL	97	99.761	Pan_troglodytes
ENSPPYG00000007053	SRL	98	100.000	ENSPANG00000013804	SRL	90	100.000	Papio_anubis
ENSPPYG00000007053	SRL	98	85.919	ENSPKIG00000006405	srl	89	85.919	Paramormyrops_kingsleyae
ENSPPYG00000007053	SRL	98	78.043	ENSPKIG00000024974	SRL	83	78.043	Paramormyrops_kingsleyae
ENSPPYG00000007053	SRL	98	73.747	ENSPMGG00000023505	-	94	72.986	Periophthalmus_magnuspinnatus
ENSPPYG00000007053	SRL	98	85.680	ENSPMGG00000021081	srl	90	85.680	Periophthalmus_magnuspinnatus
ENSPPYG00000007053	SRL	98	97.375	ENSPEMG00000015842	Srl	89	97.375	Peromyscus_maniculatus_bairdii
ENSPPYG00000007053	SRL	97	67.742	ENSPMAG00000004786	srl	99	67.512	Petromyzon_marinus
ENSPPYG00000007053	SRL	97	97.129	ENSPCIG00000012128	SRL	91	97.129	Phascolarctos_cinereus
ENSPPYG00000007053	SRL	98	82.367	ENSPFOG00000011408	srl	89	82.558	Poecilia_formosa
ENSPPYG00000007053	SRL	98	84.487	ENSPLAG00000008017	srl	91	84.487	Poecilia_latipinna
ENSPPYG00000007053	SRL	100	75.581	ENSPLAG00000002932	SRL	96	74.419	Poecilia_latipinna
ENSPPYG00000007053	SRL	98	84.487	ENSPMEG00000006745	srl	91	84.487	Poecilia_mexicana
ENSPPYG00000007053	SRL	100	73.034	ENSPMEG00000005890	SRL	58	72.235	Poecilia_mexicana
ENSPPYG00000007053	SRL	98	84.487	ENSPREG00000007751	srl	93	84.487	Poecilia_reticulata
ENSPPYG00000007053	SRL	100	76.512	ENSPREG00000000315	SRL	96	75.349	Poecilia_reticulata
ENSPPYG00000007053	SRL	98	98.091	ENSPCOG00000023135	SRL	97	98.091	Propithecus_coquereli
ENSPPYG00000007053	SRL	97	98.565	ENSPVAG00000006586	SRL	51	98.565	Pteropus_vampyrus
ENSPPYG00000007053	SRL	98	73.611	ENSPNYG00000003423	SRL	54	72.454	Pundamilia_nyererei
ENSPPYG00000007053	SRL	98	84.726	ENSPNYG00000001200	srl	92	84.726	Pundamilia_nyererei
ENSPPYG00000007053	SRL	98	83.771	ENSPNAG00000023106	srl	89	83.771	Pygocentrus_nattereri
ENSPPYG00000007053	SRL	98	76.905	ENSPNAG00000007361	-	86	76.905	Pygocentrus_nattereri
ENSPPYG00000007053	SRL	98	99.284	ENSSBOG00000029273	SRL	89	99.284	Saimiri_boliviensis_boliviensis
ENSPPYG00000007053	SRL	98	85.680	ENSSFOG00015009773	srl	90	85.680	Scleropages_formosus
ENSPPYG00000007053	SRL	98	84.248	ENSSMAG00000016274	srl	92	84.248	Scophthalmus_maximus
ENSPPYG00000007053	SRL	98	85.442	ENSSDUG00000010808	srl	92	85.442	Seriola_dumerili
ENSPPYG00000007053	SRL	100	74.142	ENSSDUG00000009161	SRL	96	74.142	Seriola_dumerili
ENSPPYG00000007053	SRL	98	85.442	ENSSLDG00000022024	srl	90	85.442	Seriola_lalandi_dorsalis
ENSPPYG00000007053	SRL	100	73.708	ENSSLDG00000014601	SRL	97	73.815	Seriola_lalandi_dorsalis
ENSPPYG00000007053	SRL	97	91.627	ENSSPUG00000016859	SRL	92	91.627	Sphenodon_punctatus
ENSPPYG00000007053	SRL	98	85.442	ENSSPAG00000019105	srl	89	85.442	Stegastes_partitus
ENSPPYG00000007053	SRL	98	77.088	ENSSPAG00000014254	SRL	93	75.895	Stegastes_partitus
ENSPPYG00000007053	SRL	97	97.602	ENSSSCG00000007949	SRL	93	97.368	Sus_scrofa
ENSPPYG00000007053	SRL	97	92.344	ENSTGUG00000003951	-	92	92.344	Taeniopygia_guttata
ENSPPYG00000007053	SRL	84	91.989	ENSTGUG00000016121	-	96	92.816	Taeniopygia_guttata
ENSPPYG00000007053	SRL	98	84.487	ENSTRUG00000006005	srl	89	84.487	Takifugu_rubripes
ENSPPYG00000007053	SRL	98	75.179	ENSTRUG00000013310	SRL	55	75.179	Takifugu_rubripes
ENSPPYG00000007053	SRL	98	84.487	ENSTNIG00000009739	srl	89	84.487	Tetraodon_nigroviridis
ENSPPYG00000007053	SRL	97	98.325	ENSUAMG00000005701	SRL	52	98.325	Ursus_americanus
ENSPPYG00000007053	SRL	97	98.565	ENSUMAG00000002574	SRL	52	98.565	Ursus_maritimus
ENSPPYG00000007053	SRL	98	90.931	ENSXETG00000017313	srl	93	90.931	Xenopus_tropicalis
ENSPPYG00000007053	SRL	100	75.349	ENSXCOG00000014584	SRL	95	75.349	Xiphophorus_couchianus
ENSPPYG00000007053	SRL	98	84.964	ENSXCOG00000010424	srl	96	84.964	Xiphophorus_couchianus
ENSPPYG00000007053	SRL	98	84.964	ENSXMAG00000004625	srl	85	84.964	Xiphophorus_maculatus
ENSPPYG00000007053	SRL	100	73.363	ENSXMAG00000027598	SRL	60	72.912	Xiphophorus_maculatus