EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPPYG00000007079 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Pongo_abelii
Status: putative
Strand: Plus strand
Length: 417140 bases
Position: chr16:7495376-7912515
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPPYP00000008003	Fox-1_C	PF12414.8	1.4e-40	1	1
ENSPPYP00000008003	RRM_1	PF00076.22	2.3e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPPYT00000008335	-	4142	-	ENSPPYP00000008003	394 (aa)	-	H2NQ24

Gene Model

Click here to download ENSPPYG00000007079's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPPYG00000007079's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPPYG00000007079	-	79	68.098	ENSPPYG00000011766	RBFOX2	69	67.802
ENSPPYG00000007079	-	77	63.961	ENSPPYG00000008704	RBFOX3	84	64.968

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPPYG00000007079	-	100	97.975	ENSG00000078328	RBFOX1	100	97.975	Homo_sapiens
ENSPPYG00000007079	-	88	70.604	ENSAPOG00000003197	rbfox1	83	72.206	Acanthochromis_polyacanthus
ENSPPYG00000007079	-	63	96.000	ENSAMEG00000008605	RBFOX1	100	96.000	Ailuropoda_melanoleuca
ENSPPYG00000007079	-	56	68.273	ENSACIG00000005478	rbfox1	56	68.273	Amphilophus_citrinellus
ENSPPYG00000007079	-	73	71.010	ENSAOCG00000008283	rbfox1	96	70.684	Amphiprion_ocellaris
ENSPPYG00000007079	-	81	65.938	ENSAPEG00000010636	rbfox1	82	68.350	Amphiprion_percula
ENSPPYG00000007079	-	77	67.593	ENSATEG00000007513	rbfox1	97	68.810	Anabas_testudineus
ENSPPYG00000007079	-	85	93.093	ENSAPLG00000013263	RBFOX1	83	93.093	Anas_platyrhynchos
ENSPPYG00000007079	-	84	85.030	ENSACAG00000004013	RBFOX1	84	85.030	Anolis_carolinensis
ENSPPYG00000007079	-	93	99.183	ENSANAG00000029527	RBFOX1	98	94.565	Aotus_nancymaae
ENSPPYG00000007079	-	57	88.000	ENSAMXG00000002431	rbfox1	65	88.000	Astyanax_mexicanus
ENSPPYG00000007079	-	93	98.907	ENSBTAG00000007210	RBFOX1	97	98.907	Bos_taurus
ENSPPYG00000007079	-	93	98.910	ENSCJAG00000017351	RBFOX1	86	97.772	Callithrix_jacchus
ENSPPYG00000007079	-	100	97.215	ENSCAFG00000019082	RBFOX1	100	97.215	Canis_familiaris
ENSPPYG00000007079	-	100	84.772	ENSCAFG00020024881	RBFOX1	99	84.772	Canis_lupus_dingo
ENSPPYG00000007079	-	100	96.456	ENSCHIG00000023549	RBFOX1	100	96.456	Capra_hircus
ENSPPYG00000007079	-	93	99.178	ENSTSYG00000005334	RBFOX1	100	93.973	Carlito_syrichta
ENSPPYG00000007079	-	91	93.333	ENSCAPG00000017669	RBFOX1	85	96.364	Cavia_aperea
ENSPPYG00000007079	-	91	93.333	ENSCPOG00000011314	RBFOX1	85	95.783	Cavia_porcellus
ENSPPYG00000007079	-	93	99.183	ENSCCAG00000023031	RBFOX1	97	94.005	Cebus_capucinus
ENSPPYG00000007079	-	100	97.975	ENSCATG00000033816	RBFOX1	98	94.565	Cercocebus_atys
ENSPPYG00000007079	-	100	97.970	ENSCLAG00000012761	RBFOX1	100	97.970	Chinchilla_lanigera
ENSPPYG00000007079	-	93	100.000	ENSCSAG00000008739	RBFOX1	97	100.000	Chlorocebus_sabaeus
ENSPPYG00000007079	-	69	88.971	ENSCHOG00000012843	RBFOX1	65	88.971	Choloepus_hoffmanni
ENSPPYG00000007079	-	93	95.082	ENSCPBG00000026626	RBFOX1	97	95.082	Chrysemys_picta_bellii
ENSPPYG00000007079	-	93	99.455	ENSCANG00000033125	RBFOX1	89	94.278	Colobus_angolensis_palliatus
ENSPPYG00000007079	-	91	93.611	ENSCGRG00001013729	Rbfox1	84	95.783	Cricetulus_griseus_chok1gshd
ENSPPYG00000007079	-	91	93.611	ENSCGRG00000003272	Rbfox1	84	95.783	Cricetulus_griseus_crigri
ENSPPYG00000007079	-	81	67.552	ENSCSEG00000008840	rbfox1	84	67.552	Cynoglossus_semilaevis
ENSPPYG00000007079	-	84	78.313	ENSDARG00000014746	rbfox1	100	87.317	Danio_rerio
ENSPPYG00000007079	-	87	93.895	ENSDNOG00000043612	RBFOX1	82	93.895	Dasypus_novemcinctus
ENSPPYG00000007079	-	84	94.012	ENSDORG00000010024	Rbfox1	86	93.713	Dipodomys_ordii
ENSPPYG00000007079	-	91	72.222	ENSETEG00000003771	RBFOX1	86	72.222	Echinops_telfairi
ENSPPYG00000007079	-	100	96.962	ENSEASG00005011599	RBFOX1	100	96.962	Equus_asinus_asinus
ENSPPYG00000007079	-	100	96.709	ENSECAG00000012667	RBFOX1	100	96.709	Equus_caballus
ENSPPYG00000007079	-	71	62.626	ENSELUG00000013096	rbfox1	79	62.626	Esox_lucius
ENSPPYG00000007079	-	100	96.962	ENSFCAG00000025322	RBFOX1	97	99.454	Felis_catus
ENSPPYG00000007079	-	82	95.046	ENSFALG00000004027	RBFOX1	97	95.046	Ficedula_albicollis
ENSPPYG00000007079	-	91	93.889	ENSFDAG00000007388	RBFOX1	84	96.386	Fukomys_damarensis
ENSPPYG00000007079	-	96	94.195	ENSGALG00000034325	RBFOX1	100	94.195	Gallus_gallus
ENSPPYG00000007079	-	100	93.147	ENSGAGG00000023681	RBFOX1	100	93.147	Gopherus_agassizii
ENSPPYG00000007079	-	93	99.455	ENSGGOG00000016871	-	89	94.278	Gorilla_gorilla
ENSPPYG00000007079	-	100	97.716	ENSHGLG00000016944	RBFOX1	100	97.716	Heterocephalus_glaber_female
ENSPPYG00000007079	-	100	97.716	ENSHGLG00100003272	RBFOX1	100	97.716	Heterocephalus_glaber_male
ENSPPYG00000007079	-	81	68.389	ENSHCOG00000016419	rbfox1	86	68.389	Hippocampus_comes
ENSPPYG00000007079	-	93	81.793	ENSIPUG00000015215	rbfox1	97	81.694	Ictalurus_punctatus
ENSPPYG00000007079	-	93	98.087	ENSSTOG00000000322	RBFOX1	97	98.087	Ictidomys_tridecemlineatus
ENSPPYG00000007079	-	91	90.278	ENSJJAG00000002575	Rbfox1	86	90.278	Jaculus_jaculus
ENSPPYG00000007079	-	84	69.628	ENSLBEG00000014659	rbfox1	90	69.628	Labrus_bergylta
ENSPPYG00000007079	-	85	84.524	ENSLOCG00000006675	rbfox1	84	84.524	Lepisosteus_oculatus
ENSPPYG00000007079	-	63	96.800	ENSLAFG00000011480	RBFOX1	81	96.800	Loxodonta_africana
ENSPPYG00000007079	-	93	99.183	ENSMFAG00000036447	RBFOX1	98	89.218	Macaca_fascicularis
ENSPPYG00000007079	-	93	99.727	ENSMMUG00000003458	RBFOX1	99	99.727	Macaca_mulatta
ENSPPYG00000007079	-	100	99.746	ENSMNEG00000032034	RBFOX1	89	99.746	Macaca_nemestrina
ENSPPYG00000007079	-	93	99.455	ENSMLEG00000015382	RBFOX1	89	94.278	Mandrillus_leucophaeus
ENSPPYG00000007079	-	81	71.257	ENSMAMG00000003142	rbfox1	96	69.836	Mastacembelus_armatus
ENSPPYG00000007079	-	72	88.772	ENSMGAG00000008606	RBFOX1	96	88.571	Meleagris_gallopavo
ENSPPYG00000007079	-	75	62.290	ENSMAUG00000020570	Rbfox1	79	61.953	Mesocricetus_auratus
ENSPPYG00000007079	-	100	96.962	ENSMICG00000034286	RBFOX1	100	96.962	Microcebus_murinus
ENSPPYG00000007079	-	91	93.611	ENSMOCG00000020932	Rbfox1	85	96.319	Microtus_ochrogaster
ENSPPYG00000007079	-	81	69.782	ENSMMOG00000009716	rbfox1	80	69.470	Mola_mola
ENSPPYG00000007079	-	90	97.740	ENSMODG00000005826	RBFOX1	100	97.740	Monodelphis_domestica
ENSPPYG00000007079	-	91	67.717	ENSMALG00000003337	rbfox1	83	71.802	Monopterus_albus
ENSPPYG00000007079	-	93	98.361	MGP_CAROLIEiJ_G0020427	Rbfox1	86	98.361	Mus_caroli
ENSPPYG00000007079	-	91	93.611	ENSMUSG00000008658	Rbfox1	98	97.173	Mus_musculus
ENSPPYG00000007079	-	93	98.087	MGP_PahariEiJ_G0016135	Rbfox1	86	98.087	Mus_pahari
ENSPPYG00000007079	-	93	97.814	MGP_SPRETEiJ_G0021321	Rbfox1	86	97.814	Mus_spretus
ENSPPYG00000007079	-	100	98.731	ENSMPUG00000014822	RBFOX1	100	98.731	Mustela_putorius_furo
ENSPPYG00000007079	-	63	97.590	ENSMLUG00000015896	RBFOX1	81	97.590	Myotis_lucifugus
ENSPPYG00000007079	-	91	94.167	ENSNGAG00000023276	Rbfox1	85	96.970	Nannospalax_galili
ENSPPYG00000007079	-	90	54.780	ENSNBRG00000011084	rbfox1	87	54.780	Neolamprologus_brichardi
ENSPPYG00000007079	-	93	99.183	ENSNLEG00000010017	-	86	95.833	Nomascus_leucogenys
ENSPPYG00000007079	-	69	95.941	ENSMEUG00000012525	RBFOX1	65	95.941	Notamacropus_eugenii
ENSPPYG00000007079	-	88	82.521	ENSOPRG00000006199	-	83	82.521	Ochotona_princeps
ENSPPYG00000007079	-	91	93.056	ENSODEG00000013166	RBFOX1	84	95.770	Octodon_degus
ENSPPYG00000007079	-	93	96.721	ENSOANG00000002379	RBFOX1	97	96.721	Ornithorhynchus_anatinus
ENSPPYG00000007079	-	55	96.330	ENSOCUG00000001205	-	97	96.330	Oryctolagus_cuniculus
ENSPPYG00000007079	-	84	97.289	ENSOGAG00000025535	RBFOX1	84	97.289	Otolemur_garnettii
ENSPPYG00000007079	-	64	84.861	ENSOARG00000005135	RBFOX1	100	84.861	Ovis_aries
ENSPPYG00000007079	-	93	99.455	ENSPPAG00000036238	-	100	97.814	Pan_paniscus
ENSPPYG00000007079	-	93	98.910	ENSPPRG00000006546	RBFOX1	89	93.733	Panthera_pardus
ENSPPYG00000007079	-	99	77.121	ENSPTIG00000021154	RBFOX1	98	76.410	Panthera_tigris_altaica
ENSPPYG00000007079	-	93	99.455	ENSPTRG00000007744	RBFOX1	89	94.278	Pan_troglodytes
ENSPPYG00000007079	-	93	99.455	ENSPANG00000026500	RBFOX1	98	94.565	Papio_anubis
ENSPPYG00000007079	-	93	81.843	ENSPKIG00000009667	-	99	82.385	Paramormyrops_kingsleyae
ENSPPYG00000007079	-	74	84.192	ENSPKIG00000019353	rbfox1	86	83.562	Paramormyrops_kingsleyae
ENSPPYG00000007079	-	84	93.353	ENSPSIG00000006523	RBFOX1	83	93.353	Pelodiscus_sinensis
ENSPPYG00000007079	-	91	93.889	ENSPEMG00000017607	Rbfox1	84	96.084	Peromyscus_maniculatus_bairdii
ENSPPYG00000007079	-	68	92.884	ENSPCIG00000026887	RBFOX1	84	92.884	Phascolarctos_cinereus
ENSPPYG00000007079	-	91	85.556	ENSPCAG00000002630	RBFOX1	95	85.556	Procavia_capensis
ENSPPYG00000007079	-	93	98.910	ENSPCOG00000025687	RBFOX1	96	94.215	Propithecus_coquereli
ENSPPYG00000007079	-	84	94.225	ENSPVAG00000013467	RBFOX1	79	94.225	Pteropus_vampyrus
ENSPPYG00000007079	-	81	77.876	ENSPNAG00000023109	rbfox1	84	77.876	Pygocentrus_nattereri
ENSPPYG00000007079	-	93	95.913	ENSRNOG00000002827	Rbfox1	97	95.913	Rattus_norvegicus
ENSPPYG00000007079	-	93	100.000	ENSRBIG00000044478	RBFOX1	97	100.000	Rhinopithecus_bieti
ENSPPYG00000007079	-	100	97.975	ENSRROG00000044411	RBFOX1	100	97.975	Rhinopithecus_roxellana
ENSPPYG00000007079	-	100	99.492	ENSSBOG00000033726	RBFOX1	100	99.492	Saimiri_boliviensis_boliviensis
ENSPPYG00000007079	-	90	88.169	ENSSHAG00000009257	RBFOX1	100	88.169	Sarcophilus_harrisii
ENSPPYG00000007079	-	63	82.937	ENSSFOG00015023675	rbfox1	73	82.937	Scleropages_formosus
ENSPPYG00000007079	-	88	65.634	ENSSFOG00015009955	-	83	65.634	Scleropages_formosus
ENSPPYG00000007079	-	88	71.074	ENSSMAG00000015505	rbfox1	89	72.206	Scophthalmus_maximus
ENSPPYG00000007079	-	85	69.436	ENSSDUG00000016413	rbfox1	81	71.560	Seriola_dumerili
ENSPPYG00000007079	-	82	69.971	ENSSLDG00000009353	rbfox1	95	71.429	Seriola_lalandi_dorsalis
ENSPPYG00000007079	-	81	80.435	ENSSPUG00000009732	RBFOX1	93	74.309	Sphenodon_punctatus
ENSPPYG00000007079	-	82	73.235	ENSSPAG00000009723	rbfox1	83	72.941	Stegastes_partitus
ENSPPYG00000007079	-	100	96.456	ENSSSCG00000007917	RBFOX1	100	98.870	Sus_scrofa
ENSPPYG00000007079	-	84	93.353	ENSTGUG00000004562	RBFOX1	85	93.353	Taeniopygia_guttata
ENSPPYG00000007079	-	85	71.143	ENSTRUG00000020940	rbfox1	90	70.857	Takifugu_rubripes
ENSPPYG00000007079	-	63	54.054	ENSTNIG00000002567	rbfox1	93	55.743	Tetraodon_nigroviridis
ENSPPYG00000007079	-	69	89.655	ENSTBEG00000009169	-	65	89.655	Tupaia_belangeri
ENSPPYG00000007079	-	91	94.693	ENSTTRG00000005700	RBFOX1	86	94.693	Tursiops_truncatus
ENSPPYG00000007079	-	100	94.670	ENSUAMG00000024633	RBFOX1	99	94.670	Ursus_americanus
ENSPPYG00000007079	-	100	85.787	ENSUMAG00000003579	RBFOX1	99	85.787	Ursus_maritimus
ENSPPYG00000007079	-	69	96.694	ENSVPAG00000001284	RBFOX1	65	96.694	Vicugna_pacos
ENSPPYG00000007079	-	93	99.454	ENSVVUG00000017311	RBFOX1	97	99.454	Vulpes_vulpes