EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSPPYG00000007123 (Gene tree)
Gene ID: 100172259
Gene Symbol: PARN
Alias: -
Full Name: Pongo abelii poly(A)-specific ribonuclease (PARN)%2C mRNA.
Gene Type: protein_coding
Species: Pongo_abelii
Status: putative
Strand: Minus strand
Length: 194176 bases
Position: chr16:14910960-15105135
Accession: NM_001131885
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPPYP00000008052	R3H	PF01424.22	3.1e-05	1	1
ENSPPYP00000008052	RNA_bind	PF08675.11	4.4e-33	1	1
ENSPPYP00000008052	CAF1	PF04857.20	2.9e-87	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPPYT00000008387	-	3002	XM_024241366	ENSPPYP00000008052	640 (aa)	XP_024097134	H2NQ72

Gene Model

Click here to download ENSPPYG00000007123's gene model file

Pathways

Pathway ID	Pathway Name	Source
pon03018	RNA degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPPYG00000007123's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPPYG00000007123	PARN	100	99.064	ENSG00000140694	PARN	100	99.481	Homo_sapiens
ENSPPYG00000007123	PARN	100	92.212	ENSAMEG00000011208	PARN	100	92.212	Ailuropoda_melanoleuca
ENSPPYG00000007123	PARN	83	75.836	ENSACIG00000000619	parn	83	75.836	Amphilophus_citrinellus
ENSPPYG00000007123	PARN	91	72.850	ENSAOCG00000003465	parn	84	72.850	Amphiprion_ocellaris
ENSPPYG00000007123	PARN	74	77.568	ENSAPEG00000010661	parn	91	77.568	Amphiprion_percula
ENSPPYG00000007123	PARN	95	72.654	ENSATEG00000004661	parn	88	71.268	Anabas_testudineus
ENSPPYG00000007123	PARN	99	84.434	ENSAPLG00000013914	PARN	99	84.434	Anas_platyrhynchos
ENSPPYG00000007123	PARN	100	78.221	ENSACAG00000004973	PARN	100	78.221	Anolis_carolinensis
ENSPPYG00000007123	PARN	100	96.256	ENSANAG00000031516	PARN	100	98.305	Aotus_nancymaae
ENSPPYG00000007123	PARN	91	74.276	ENSACLG00000004742	parn	84	74.276	Astatotilapia_calliptera
ENSPPYG00000007123	PARN	100	66.716	ENSAMXG00000012390	parn	100	66.617	Astyanax_mexicanus
ENSPPYG00000007123	PARN	100	90.640	ENSBTAG00000018097	PARN	100	93.599	Bos_taurus
ENSPPYG00000007123	PARN	100	97.192	ENSCJAG00000015866	PARN	100	98.305	Callithrix_jacchus
ENSPPYG00000007123	PARN	100	92.356	ENSCAFG00000018795	PARN	100	92.356	Canis_familiaris
ENSPPYG00000007123	PARN	100	92.356	ENSCAFG00020024126	PARN	100	92.356	Canis_lupus_dingo
ENSPPYG00000007123	PARN	100	93.604	ENSCHIG00000018143	PARN	100	93.604	Capra_hircus
ENSPPYG00000007123	PARN	73	63.561	ENSCAPG00000007984	PARN	78	63.561	Cavia_aperea
ENSPPYG00000007123	PARN	100	90.484	ENSCPOG00000002263	PARN	100	90.484	Cavia_porcellus
ENSPPYG00000007123	PARN	100	97.192	ENSCCAG00000030367	PARN	100	98.305	Cebus_capucinus
ENSPPYG00000007123	PARN	52	35.811	ENSCATG00000033196	PNLDC1	70	35.811	Cercocebus_atys
ENSPPYG00000007123	PARN	90	98.788	ENSCATG00000041368	PARN	100	98.788	Cercocebus_atys
ENSPPYG00000007123	PARN	100	90.016	ENSCLAG00000015406	PARN	99	90.016	Chinchilla_lanigera
ENSPPYG00000007123	PARN	100	98.596	ENSCSAG00000008142	PARN	100	98.596	Chlorocebus_sabaeus
ENSPPYG00000007123	PARN	99	76.656	ENSCHOG00000007014	PARN	100	76.656	Choloepus_hoffmanni
ENSPPYG00000007123	PARN	88	85.561	ENSCPBG00000006609	PARN	97	85.847	Chrysemys_picta_bellii
ENSPPYG00000007123	PARN	80	44.112	ENSCING00000010142	-	99	43.820	Ciona_intestinalis
ENSPPYG00000007123	PARN	100	85.909	ENSCANG00000028849	-	100	98.305	Colobus_angolensis_palliatus
ENSPPYG00000007123	PARN	100	85.248	ENSCGRG00001012096	Parn	100	85.248	Cricetulus_griseus_chok1gshd
ENSPPYG00000007123	PARN	100	85.248	ENSCGRG00000004939	Parn	100	85.248	Cricetulus_griseus_crigri
ENSPPYG00000007123	PARN	95	68.447	ENSCSEG00000002064	parn	100	63.677	Cynoglossus_semilaevis
ENSPPYG00000007123	PARN	91	73.038	ENSCVAG00000014848	parn	83	73.038	Cyprinodon_variegatus
ENSPPYG00000007123	PARN	100	63.939	ENSDARG00000102634	parn	100	63.939	Danio_rerio
ENSPPYG00000007123	PARN	100	92.356	ENSDNOG00000000833	PARN	100	92.980	Dasypus_novemcinctus
ENSPPYG00000007123	PARN	74	94.677	ENSETEG00000014828	-	78	94.677	Echinops_telfairi
ENSPPYG00000007123	PARN	100	92.200	ENSEASG00005011400	PARN	100	92.200	Equus_asinus_asinus
ENSPPYG00000007123	PARN	100	92.044	ENSECAG00000017792	PARN	100	92.044	Equus_caballus
ENSPPYG00000007123	PARN	86	84.615	ENSEEUG00000010370	PARN	86	84.615	Erinaceus_europaeus
ENSPPYG00000007123	PARN	91	71.886	ENSELUG00000013139	parn	77	71.886	Esox_lucius
ENSPPYG00000007123	PARN	100	93.136	ENSFCAG00000044961	PARN	100	94.915	Felis_catus
ENSPPYG00000007123	PARN	99	83.281	ENSFALG00000003911	PARN	98	83.281	Ficedula_albicollis
ENSPPYG00000007123	PARN	100	89.860	ENSFDAG00000009234	PARN	100	89.860	Fukomys_damarensis
ENSPPYG00000007123	PARN	92	66.003	ENSFHEG00000013738	parn	92	76.271	Fundulus_heteroclitus
ENSPPYG00000007123	PARN	83	76.580	ENSGMOG00000003231	parn	97	76.580	Gadus_morhua
ENSPPYG00000007123	PARN	100	82.171	ENSGALG00000003091	PARN	100	82.171	Gallus_gallus
ENSPPYG00000007123	PARN	90	72.619	ENSGAFG00000011061	parn	84	72.408	Gambusia_affinis
ENSPPYG00000007123	PARN	83	76.766	ENSGACG00000019501	parn	100	67.896	Gasterosteus_aculeatus
ENSPPYG00000007123	PARN	51	79.448	ENSGAGG00000023281	PARN	83	79.448	Gopherus_agassizii
ENSPPYG00000007123	PARN	97	98.716	ENSGGOG00000025224	PARN	100	98.972	Gorilla_gorilla
ENSPPYG00000007123	PARN	91	74.276	ENSHBUG00000017906	parn	90	76.994	Haplochromis_burtoni
ENSPPYG00000007123	PARN	100	90.172	ENSHGLG00000010886	PARN	100	90.172	Heterocephalus_glaber_female
ENSPPYG00000007123	PARN	100	90.172	ENSHGLG00100014659	PARN	100	90.172	Heterocephalus_glaber_male
ENSPPYG00000007123	PARN	82	74.011	ENSHCOG00000008683	parn	91	74.011	Hippocampus_comes
ENSPPYG00000007123	PARN	90	63.058	ENSIPUG00000012401	parn	84	63.058	Ictalurus_punctatus
ENSPPYG00000007123	PARN	100	90.796	ENSSTOG00000007519	PARN	100	90.796	Ictidomys_tridecemlineatus
ENSPPYG00000007123	PARN	100	87.676	ENSJJAG00000023049	Parn	100	87.676	Jaculus_jaculus
ENSPPYG00000007123	PARN	91	73.469	ENSKMAG00000009462	parn	84	73.469	Kryptolebias_marmoratus
ENSPPYG00000007123	PARN	91	72.420	ENSLBEG00000009167	parn	90	72.420	Labrus_bergylta
ENSPPYG00000007123	PARN	79	78.373	ENSLACG00000004207	PARN	100	76.995	Latimeria_chalumnae
ENSPPYG00000007123	PARN	92	74.746	ENSLOCG00000000715	parn	87	73.115	Lepisosteus_oculatus
ENSPPYG00000007123	PARN	100	92.512	ENSLAFG00000015036	PARN	100	92.512	Loxodonta_africana
ENSPPYG00000007123	PARN	100	92.991	ENSMFAG00000044852	PARN	100	98.962	Macaca_fascicularis
ENSPPYG00000007123	PARN	100	98.596	ENSMMUG00000018849	PARN	100	98.596	Macaca_mulatta
ENSPPYG00000007123	PARN	100	98.752	ENSMNEG00000045108	PARN	100	98.752	Macaca_nemestrina
ENSPPYG00000007123	PARN	100	98.596	ENSMLEG00000031743	PARN	100	98.962	Mandrillus_leucophaeus
ENSPPYG00000007123	PARN	92	72.408	ENSMAMG00000006939	parn	84	72.408	Mastacembelus_armatus
ENSPPYG00000007123	PARN	91	74.276	ENSMZEG00005013590	parn	90	76.766	Maylandia_zebra
ENSPPYG00000007123	PARN	95	82.276	ENSMGAG00000001004	PARN	95	82.276	Meleagris_gallopavo
ENSPPYG00000007123	PARN	100	80.000	ENSMAUG00000008025	Parn	100	79.908	Mesocricetus_auratus
ENSPPYG00000007123	PARN	100	95.476	ENSMICG00000016053	PARN	100	96.610	Microcebus_murinus
ENSPPYG00000007123	PARN	77	90.524	ENSMOCG00000022211	Parn	100	90.524	Microtus_ochrogaster
ENSPPYG00000007123	PARN	83	75.605	ENSMMOG00000011333	parn	87	75.605	Mola_mola
ENSPPYG00000007123	PARN	77	93.952	ENSMODG00000004915	PARN	99	93.952	Monodelphis_domestica
ENSPPYG00000007123	PARN	83	78.664	ENSMALG00000019426	parn	91	78.664	Monopterus_albus
ENSPPYG00000007123	PARN	100	85.959	MGP_CAROLIEiJ_G0020466	Parn	100	85.959	Mus_caroli
ENSPPYG00000007123	PARN	100	85.959	ENSMUSG00000022685	Parn	100	89.286	Mus_musculus
ENSPPYG00000007123	PARN	100	85.647	MGP_PahariEiJ_G0016172	Parn	100	85.647	Mus_pahari
ENSPPYG00000007123	PARN	100	85.959	MGP_SPRETEiJ_G0021361	Parn	100	85.959	Mus_spretus
ENSPPYG00000007123	PARN	100	92.356	ENSMPUG00000014464	PARN	100	92.356	Mustela_putorius_furo
ENSPPYG00000007123	PARN	77	93.750	ENSMLUG00000005414	PARN	100	93.750	Myotis_lucifugus
ENSPPYG00000007123	PARN	83	76.493	ENSNBRG00000006805	parn	90	76.493	Neolamprologus_brichardi
ENSPPYG00000007123	PARN	100	98.284	ENSNLEG00000010241	PARN	100	98.305	Nomascus_leucogenys
ENSPPYG00000007123	PARN	99	60.410	ENSMEUG00000008178	-	100	60.410	Notamacropus_eugenii
ENSPPYG00000007123	PARN	99	85.804	ENSOPRG00000012187	PARN	100	85.804	Ochotona_princeps
ENSPPYG00000007123	PARN	100	81.211	ENSODEG00000001617	PARN	100	81.211	Octodon_degus
ENSPPYG00000007123	PARN	100	69.525	ENSONIG00000000151	parn	100	69.525	Oreochromis_niloticus
ENSPPYG00000007123	PARN	59	82.152	ENSOANG00000020155	-	97	82.677	Ornithorhynchus_anatinus
ENSPPYG00000007123	PARN	99	91.066	ENSOCUG00000000322	PARN	100	91.066	Oryctolagus_cuniculus
ENSPPYG00000007123	PARN	95	70.261	ENSORLG00020010313	parn	88	70.261	Oryzias_latipes_hni
ENSPPYG00000007123	PARN	95	70.261	ENSORLG00015000300	parn	88	70.261	Oryzias_latipes_hsok
ENSPPYG00000007123	PARN	92	72.128	ENSOMEG00000019555	parn	97	66.368	Oryzias_melastigma
ENSPPYG00000007123	PARN	77	94.545	ENSOGAG00000014626	PARN	100	94.545	Otolemur_garnettii
ENSPPYG00000007123	PARN	77	97.177	ENSOARG00000007574	PARN	100	97.177	Ovis_aries
ENSPPYG00000007123	PARN	100	98.752	ENSPPAG00000031438	PARN	100	98.771	Pan_paniscus
ENSPPYG00000007123	PARN	100	92.980	ENSPPRG00000018583	PARN	100	94.915	Panthera_pardus
ENSPPYG00000007123	PARN	100	93.136	ENSPTIG00000012135	PARN	100	94.915	Panthera_tigris_altaica
ENSPPYG00000007123	PARN	100	98.752	ENSPTRG00000007792	PARN	100	98.771	Pan_troglodytes
ENSPPYG00000007123	PARN	100	95.320	ENSPANG00000020099	PARN	100	98.305	Papio_anubis
ENSPPYG00000007123	PARN	91	74.144	ENSPKIG00000022807	parn	95	67.152	Paramormyrops_kingsleyae
ENSPPYG00000007123	PARN	99	83.386	ENSPSIG00000014804	PARN	100	83.391	Pelodiscus_sinensis
ENSPPYG00000007123	PARN	80	76.357	ENSPMGG00000014431	parn	75	74.312	Periophthalmus_magnuspinnatus
ENSPPYG00000007123	PARN	100	83.307	ENSPEMG00000018439	Parn	100	83.307	Peromyscus_maniculatus_bairdii
ENSPPYG00000007123	PARN	81	67.050	ENSPMAG00000003956	parn	99	67.050	Petromyzon_marinus
ENSPPYG00000007123	PARN	66	86.353	ENSPCIG00000001259	PARN	91	89.831	Phascolarctos_cinereus
ENSPPYG00000007123	PARN	83	77.323	ENSPFOG00000012823	parn	84	72.315	Poecilia_formosa
ENSPPYG00000007123	PARN	83	77.509	ENSPLAG00000006395	parn	84	72.483	Poecilia_latipinna
ENSPPYG00000007123	PARN	83	77.509	ENSPMEG00000007711	parn	84	72.651	Poecilia_mexicana
ENSPPYG00000007123	PARN	83	77.138	ENSPREG00000000147	parn	84	72.315	Poecilia_reticulata
ENSPPYG00000007123	PARN	95	81.908	ENSPCAG00000001741	PARN	100	82.730	Procavia_capensis
ENSPPYG00000007123	PARN	100	92.668	ENSPCOG00000019292	PARN	100	96.610	Propithecus_coquereli
ENSPPYG00000007123	PARN	99	89.432	ENSPVAG00000002547	PARN	100	89.432	Pteropus_vampyrus
ENSPPYG00000007123	PARN	91	74.276	ENSPNYG00000006835	parn	90	74.026	Pundamilia_nyererei
ENSPPYG00000007123	PARN	84	72.913	ENSPNAG00000018905	parn	86	72.913	Pygocentrus_nattereri
ENSPPYG00000007123	PARN	100	83.308	ENSRNOG00000002912	Parn	98	88.889	Rattus_norvegicus
ENSPPYG00000007123	PARN	52	98.198	ENSRBIG00000018726	PARN	100	98.198	Rhinopithecus_bieti
ENSPPYG00000007123	PARN	52	98.198	ENSRROG00000011162	-	100	98.198	Rhinopithecus_roxellana
ENSPPYG00000007123	PARN	100	95.632	ENSSBOG00000034726	PARN	100	98.305	Saimiri_boliviensis_boliviensis
ENSPPYG00000007123	PARN	66	92.619	ENSSHAG00000008493	PARN	94	92.619	Sarcophilus_harrisii
ENSPPYG00000007123	PARN	96	72.213	ENSSFOG00015014165	parn	94	72.449	Scleropages_formosus
ENSPPYG00000007123	PARN	95	69.132	ENSSMAG00000000685	parn	100	62.787	Scophthalmus_maximus
ENSPPYG00000007123	PARN	90	72.959	ENSSDUG00000014555	parn	83	72.959	Seriola_dumerili
ENSPPYG00000007123	PARN	90	80.517	ENSSARG00000014339	PARN	100	80.517	Sorex_araneus
ENSPPYG00000007123	PARN	100	84.399	ENSSPUG00000007719	PARN	100	84.399	Sphenodon_punctatus
ENSPPYG00000007123	PARN	91	74.194	ENSSPAG00000007095	parn	86	74.254	Stegastes_partitus
ENSPPYG00000007123	PARN	100	92.200	ENSSSCG00000007878	PARN	89	92.200	Sus_scrofa
ENSPPYG00000007123	PARN	55	30.663	ENSTGUG00000011418	PNLDC1	68	30.663	Taeniopygia_guttata
ENSPPYG00000007123	PARN	99	83.019	ENSTGUG00000004971	PARN	99	83.019	Taeniopygia_guttata
ENSPPYG00000007123	PARN	100	68.413	ENSTNIG00000008252	parn	100	68.567	Tetraodon_nigroviridis
ENSPPYG00000007123	PARN	90	79.655	ENSTBEG00000010407	PARN	100	79.655	Tupaia_belangeri
ENSPPYG00000007123	PARN	99	88.801	ENSTTRG00000002843	PARN	100	88.801	Tursiops_truncatus
ENSPPYG00000007123	PARN	68	83.716	ENSUAMG00000008283	PARN	90	83.716	Ursus_americanus
ENSPPYG00000007123	PARN	100	92.668	ENSUMAG00000004527	PARN	100	92.668	Ursus_maritimus
ENSPPYG00000007123	PARN	96	89.286	ENSVPAG00000008968	PARN	100	89.286	Vicugna_pacos
ENSPPYG00000007123	PARN	100	92.824	ENSVVUG00000019509	PARN	100	92.824	Vulpes_vulpes
ENSPPYG00000007123	PARN	100	73.717	ENSXETG00000010994	parn	100	82.197	Xenopus_tropicalis
ENSPPYG00000007123	PARN	90	68.782	ENSXCOG00000015990	parn	96	68.634	Xiphophorus_couchianus
ENSPPYG00000007123	PARN	92	72.651	ENSXMAG00000014783	parn	84	72.651	Xiphophorus_maculatus