EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPPYG00000007348 (Gene tree)
Gene ID: 100443449
Gene Symbol: CHD9
Alias: BC022889|FLJ12178|KIAA0308
Full Name: chromodomain helicase DNA binding protein 9
Gene Type: protein_coding
Species: Pongo_abelii
Status: putative
Strand: Plus strand
Length: 176477 bases
Position: chr16:40264103-40440579
Accession: 100443449
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPPYP00000008298	ResIII	PF04851.15	4e-06	1	1
ENSPPYP00000008298	BRK	PF07533.16	8.3e-31	1	2
ENSPPYP00000008298	BRK	PF07533.16	8.3e-31	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPPYT00000008638	CHD9-201	11342	XM_024233432	ENSPPYP00000008298	2898 (aa)	XP_024089200	H2NQW2

Gene Model

Click here to download ENSPPYG00000007348's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPPYG00000007348's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPPYG00000007348	CHD9	74	57.253	ENSPPYG00000005596	CHD8	72	68.622
ENSPPYG00000007348	CHD9	85	70.519	ENSPPYG00000018618	CHD7	84	66.752
ENSPPYG00000007348	CHD9	72	62.872	ENSPPYG00000011016	CHD6	79	62.813

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPPYG00000007348	CHD9	100	99.482	ENSG00000177200	CHD9	100	100.000	Homo_sapiens
ENSPPYG00000007348	CHD9	85	70.771	ENSAPOG00000023034	chd9	99	60.280	Acanthochromis_polyacanthus
ENSPPYG00000007348	CHD9	100	96.245	ENSAMEG00000016232	CHD9	100	96.245	Ailuropoda_melanoleuca
ENSPPYG00000007348	CHD9	80	69.414	ENSACIG00000004097	chd9	73	61.282	Amphilophus_citrinellus
ENSPPYG00000007348	CHD9	80	70.733	ENSAOCG00000005487	chd9	67	75.179	Amphiprion_ocellaris
ENSPPYG00000007348	CHD9	85	70.649	ENSAPEG00000009859	chd9	99	61.443	Amphiprion_percula
ENSPPYG00000007348	CHD9	85	70.674	ENSATEG00000002748	chd9	99	61.984	Anabas_testudineus
ENSPPYG00000007348	CHD9	99	84.386	ENSAPLG00000002826	CHD9	74	86.157	Anas_platyrhynchos
ENSPPYG00000007348	CHD9	99	80.886	ENSACAG00000016150	CHD9	98	81.198	Anolis_carolinensis
ENSPPYG00000007348	CHD9	100	98.551	ENSANAG00000015630	CHD9	100	98.901	Aotus_nancymaae
ENSPPYG00000007348	CHD9	80	70.063	ENSACLG00000016899	chd9	73	63.507	Astatotilapia_calliptera
ENSPPYG00000007348	CHD9	99	61.577	ENSAMXG00000005652	chd9	68	74.820	Astyanax_mexicanus
ENSPPYG00000007348	CHD9	100	95.693	ENSBTAG00000002287	CHD9	100	95.624	Bos_taurus
ENSPPYG00000007348	CHD9	100	97.758	ENSCJAG00000001573	CHD9	100	99.267	Callithrix_jacchus
ENSPPYG00000007348	CHD9	100	96.347	ENSCAFG00000009699	CHD9	100	96.347	Canis_familiaris
ENSPPYG00000007348	CHD9	100	96.347	ENSCAFG00020002879	CHD9	100	98.168	Canis_lupus_dingo
ENSPPYG00000007348	CHD9	100	96.794	ENSTSYG00000007693	CHD9	100	97.802	Carlito_syrichta
ENSPPYG00000007348	CHD9	81	79.345	ENSCAPG00000011604	CHD9	81	79.597	Cavia_aperea
ENSPPYG00000007348	CHD9	100	91.523	ENSCPOG00000036544	CHD9	100	91.110	Cavia_porcellus
ENSPPYG00000007348	CHD9	100	97.792	ENSCCAG00000036178	CHD9	100	98.535	Cebus_capucinus
ENSPPYG00000007348	CHD9	100	98.483	ENSCATG00000036753	CHD9	100	99.267	Cercocebus_atys
ENSPPYG00000007348	CHD9	99	95.316	ENSCLAG00000007137	CHD9	99	97.572	Chinchilla_lanigera
ENSPPYG00000007348	CHD9	100	99.001	ENSCSAG00000005311	CHD9	100	99.001	Chlorocebus_sabaeus
ENSPPYG00000007348	CHD9	74	98.077	ENSCHOG00000003935	CHD9	76	98.077	Choloepus_hoffmanni
ENSPPYG00000007348	CHD9	99	85.566	ENSCPBG00000012459	CHD9	99	91.835	Chrysemys_picta_bellii
ENSPPYG00000007348	CHD9	100	99.000	ENSCANG00000030349	CHD9	100	99.267	Colobus_angolensis_palliatus
ENSPPYG00000007348	CHD9	99	92.463	ENSCGRG00001016150	Chd9	99	91.768	Cricetulus_griseus_chok1gshd
ENSPPYG00000007348	CHD9	99	92.463	ENSCGRG00000012850	Chd9	99	96.301	Cricetulus_griseus_crigri
ENSPPYG00000007348	CHD9	85	68.538	ENSCSEG00000009209	chd9	67	72.484	Cynoglossus_semilaevis
ENSPPYG00000007348	CHD9	85	70.280	ENSCVAG00000016195	chd9	73	62.432	Cyprinodon_variegatus
ENSPPYG00000007348	CHD9	81	68.467	ENSDARG00000074498	chd9	67	73.827	Danio_rerio
ENSPPYG00000007348	CHD9	81	95.281	ENSDNOG00000006045	CHD9	100	95.281	Dasypus_novemcinctus
ENSPPYG00000007348	CHD9	69	93.109	ENSDORG00000008523	-	100	92.613	Dipodomys_ordii
ENSPPYG00000007348	CHD9	94	97.368	ENSETEG00000009565	CHD9	94	97.368	Echinops_telfairi
ENSPPYG00000007348	CHD9	99	96.079	ENSEASG00005014832	CHD9	100	96.106	Equus_asinus_asinus
ENSPPYG00000007348	CHD9	100	96.039	ENSECAG00000011505	CHD9	100	96.039	Equus_caballus
ENSPPYG00000007348	CHD9	83	97.790	ENSEEUG00000014515	CHD9	86	97.790	Erinaceus_europaeus
ENSPPYG00000007348	CHD9	78	71.988	ENSELUG00000006031	chd9	92	69.567	Esox_lucius
ENSPPYG00000007348	CHD9	100	96.036	ENSFCAG00000022534	CHD9	100	97.802	Felis_catus
ENSPPYG00000007348	CHD9	83	87.667	ENSFALG00000013276	CHD9	99	87.875	Ficedula_albicollis
ENSPPYG00000007348	CHD9	100	94.762	ENSFDAG00000021037	CHD9	100	94.314	Fukomys_damarensis
ENSPPYG00000007348	CHD9	85	69.790	ENSFHEG00000006068	chd9	68	74.716	Fundulus_heteroclitus
ENSPPYG00000007348	CHD9	67	76.934	ENSGMOG00000006040	chd9	83	77.001	Gadus_morhua
ENSPPYG00000007348	CHD9	96	85.766	ENSGALG00000039178	CHD9	98	86.090	Gallus_gallus
ENSPPYG00000007348	CHD9	85	69.900	ENSGAFG00000010014	chd9	99	59.635	Gambusia_affinis
ENSPPYG00000007348	CHD9	81	67.063	ENSGACG00000016694	chd9	68	74.802	Gasterosteus_aculeatus
ENSPPYG00000007348	CHD9	100	99.276	ENSGGOG00000014816	CHD9	100	99.634	Gorilla_gorilla
ENSPPYG00000007348	CHD9	80	70.484	ENSHBUG00000023322	chd9	96	69.580	Haplochromis_burtoni
ENSPPYG00000007348	CHD9	100	94.866	ENSHGLG00000014938	CHD9	99	98.035	Heterocephalus_glaber_female
ENSPPYG00000007348	CHD9	89	65.447	ENSHCOG00000000937	chd9	69	73.448	Hippocampus_comes
ENSPPYG00000007348	CHD9	82	69.499	ENSIPUG00000016448	chd9	97	73.723	Ictalurus_punctatus
ENSPPYG00000007348	CHD9	100	95.829	ENSSTOG00000022273	CHD9	99	98.382	Ictidomys_tridecemlineatus
ENSPPYG00000007348	CHD9	69	93.939	ENSJJAG00000015741	-	100	93.890	Jaculus_jaculus
ENSPPYG00000007348	CHD9	85	70.391	ENSKMAG00000016784	chd9	96	61.283	Kryptolebias_marmoratus
ENSPPYG00000007348	CHD9	79	69.674	ENSLBEG00000012077	chd9	66	74.021	Labrus_bergylta
ENSPPYG00000007348	CHD9	99	71.874	ENSLACG00000005557	CHD9	73	72.091	Latimeria_chalumnae
ENSPPYG00000007348	CHD9	87	72.868	ENSLOCG00000007225	chd9	99	73.559	Lepisosteus_oculatus
ENSPPYG00000007348	CHD9	100	95.074	ENSLAFG00000015374	CHD9	100	95.074	Loxodonta_africana
ENSPPYG00000007348	CHD9	100	99.104	ENSMFAG00000041354	CHD9	100	99.267	Macaca_fascicularis
ENSPPYG00000007348	CHD9	100	99.104	ENSMMUG00000016310	CHD9	100	99.267	Macaca_mulatta
ENSPPYG00000007348	CHD9	100	99.035	ENSMNEG00000031494	CHD9	100	99.196	Macaca_nemestrina
ENSPPYG00000007348	CHD9	100	99.138	ENSMLEG00000043219	CHD9	100	99.267	Mandrillus_leucophaeus
ENSPPYG00000007348	CHD9	85	70.064	ENSMAMG00000003909	chd9	99	60.461	Mastacembelus_armatus
ENSPPYG00000007348	CHD9	85	70.762	ENSMZEG00005006581	chd9	99	61.250	Maylandia_zebra
ENSPPYG00000007348	CHD9	95	79.993	ENSMGAG00000004642	CHD9	72	81.052	Meleagris_gallopavo
ENSPPYG00000007348	CHD9	100	96.450	ENSMICG00000016679	CHD9	100	97.070	Microcebus_murinus
ENSPPYG00000007348	CHD9	72	90.703	ENSMODG00000013142	-	99	92.235	Monodelphis_domestica
ENSPPYG00000007348	CHD9	80	69.987	ENSMALG00000013306	chd9	73	62.620	Monopterus_albus
ENSPPYG00000007348	CHD9	99	90.874	MGP_CAROLIEiJ_G0031364	Chd9	99	90.632	Mus_caroli
ENSPPYG00000007348	CHD9	99	90.486	ENSMUSG00000056608	Chd9	99	95.491	Mus_musculus
ENSPPYG00000007348	CHD9	99	88.596	MGP_PahariEiJ_G0022964	Chd9	99	88.354	Mus_pahari
ENSPPYG00000007348	CHD9	99	90.590	MGP_SPRETEiJ_G0032483	Chd9	99	90.174	Mus_spretus
ENSPPYG00000007348	CHD9	100	95.863	ENSMPUG00000003285	CHD9	100	95.863	Mustela_putorius_furo
ENSPPYG00000007348	CHD9	100	94.140	ENSMLUG00000004456	CHD9	100	93.761	Myotis_lucifugus
ENSPPYG00000007348	CHD9	85	70.463	ENSNBRG00000009423	chd9	99	60.908	Neolamprologus_brichardi
ENSPPYG00000007348	CHD9	90	99.463	ENSNLEG00000001026	CHD9	100	99.463	Nomascus_leucogenys
ENSPPYG00000007348	CHD9	76	96.078	ENSMEUG00000008222	-	84	96.078	Notamacropus_eugenii
ENSPPYG00000007348	CHD9	85	97.429	ENSOPRG00000011168	CHD9	85	97.429	Ochotona_princeps
ENSPPYG00000007348	CHD9	99	94.656	ENSODEG00000004466	CHD9	99	94.344	Octodon_degus
ENSPPYG00000007348	CHD9	80	71.447	ENSONIG00000002816	chd9	87	62.986	Oreochromis_niloticus
ENSPPYG00000007348	CHD9	100	86.639	ENSOANG00000013401	CHD9	100	86.915	Ornithorhynchus_anatinus
ENSPPYG00000007348	CHD9	83	97.187	ENSOCUG00000001016	CHD9	99	97.187	Oryctolagus_cuniculus
ENSPPYG00000007348	CHD9	84	70.214	ENSORLG00000013810	chd9	97	60.681	Oryzias_latipes
ENSPPYG00000007348	CHD9	85	71.059	ENSORLG00015019126	chd9	98	67.903	Oryzias_latipes_hsok
ENSPPYG00000007348	CHD9	100	95.661	ENSOGAG00000002110	CHD9	100	95.007	Otolemur_garnettii
ENSPPYG00000007348	CHD9	100	95.318	ENSOARG00000017664	CHD9	100	95.318	Ovis_aries
ENSPPYG00000007348	CHD9	83	98.381	ENSPPAG00000039388	-	100	98.381	Pan_paniscus
ENSPPYG00000007348	CHD9	100	95.967	ENSPPRG00000004801	CHD9	100	97.436	Panthera_pardus
ENSPPYG00000007348	CHD9	100	95.002	ENSPTIG00000021854	CHD9	100	95.002	Panthera_tigris_altaica
ENSPPYG00000007348	CHD9	100	99.586	ENSPTRG00000008113	CHD9	100	99.634	Pan_troglodytes
ENSPPYG00000007348	CHD9	100	99.104	ENSPANG00000019307	CHD9	100	99.267	Papio_anubis
ENSPPYG00000007348	CHD9	97	62.839	ENSPKIG00000021876	chd9	68	76.675	Paramormyrops_kingsleyae
ENSPPYG00000007348	CHD9	98	59.166	ENSPKIG00000025401	-	71	62.776	Paramormyrops_kingsleyae
ENSPPYG00000007348	CHD9	64	85.081	ENSPSIG00000008099	CHD9	99	85.027	Pelodiscus_sinensis
ENSPPYG00000007348	CHD9	59	57.306	ENSPMAG00000006035	-	72	68.003	Petromyzon_marinus
ENSPPYG00000007348	CHD9	89	88.165	ENSPCIG00000017215	CHD9	97	90.020	Phascolarctos_cinereus
ENSPPYG00000007348	CHD9	85	69.971	ENSPFOG00000015839	chd9	97	60.600	Poecilia_formosa
ENSPPYG00000007348	CHD9	85	70.054	ENSPLAG00000011118	chd9	97	60.626	Poecilia_latipinna
ENSPPYG00000007348	CHD9	85	70.518	ENSPMEG00000015106	chd9	74	61.790	Poecilia_mexicana
ENSPPYG00000007348	CHD9	85	71.168	ENSPREG00000006473	chd9	89	67.535	Poecilia_reticulata
ENSPPYG00000007348	CHD9	77	96.507	ENSPCAG00000007564	CHD9	86	96.507	Procavia_capensis
ENSPPYG00000007348	CHD9	100	95.381	ENSPCOG00000028433	CHD9	100	98.168	Propithecus_coquereli
ENSPPYG00000007348	CHD9	97	93.654	ENSPVAG00000015617	CHD9	98	93.691	Pteropus_vampyrus
ENSPPYG00000007348	CHD9	85	70.726	ENSPNYG00000010947	chd9	66	75.537	Pundamilia_nyererei
ENSPPYG00000007348	CHD9	94	62.646	ENSPNAG00000024141	chd9	68	75.075	Pygocentrus_nattereri
ENSPPYG00000007348	CHD9	90	87.916	ENSRNOG00000049302	Chd9	100	90.476	Rattus_norvegicus
ENSPPYG00000007348	CHD9	83	99.173	ENSRBIG00000035553	CHD9	100	99.267	Rhinopithecus_bieti
ENSPPYG00000007348	CHD9	83	99.165	ENSRROG00000033278	CHD9	100	99.267	Rhinopithecus_roxellana
ENSPPYG00000007348	CHD9	100	98.379	ENSSBOG00000030240	CHD9	100	98.535	Saimiri_boliviensis_boliviensis
ENSPPYG00000007348	CHD9	99	88.054	ENSSHAG00000002719	CHD9	100	88.098	Sarcophilus_harrisii
ENSPPYG00000007348	CHD9	85	67.903	ENSSFOG00015001327	chd9	67	75.852	Scleropages_formosus
ENSPPYG00000007348	CHD9	98	62.334	ENSSFOG00015020209	chd9	99	70.053	Scleropages_formosus
ENSPPYG00000007348	CHD9	85	69.269	ENSSMAG00000008953	chd9	99	62.546	Scophthalmus_maximus
ENSPPYG00000007348	CHD9	84	70.197	ENSSDUG00000006139	chd9	99	59.727	Seriola_dumerili
ENSPPYG00000007348	CHD9	84	70.682	ENSSLDG00000017818	chd9	99	61.686	Seriola_lalandi_dorsalis
ENSPPYG00000007348	CHD9	97	93.921	ENSSARG00000010632	CHD9	71	97.603	Sorex_araneus
ENSPPYG00000007348	CHD9	85	70.021	ENSSPAG00000021649	chd9	67	74.836	Stegastes_partitus
ENSPPYG00000007348	CHD9	90	85.660	ENSTGUG00000007476	CHD9	100	85.851	Taeniopygia_guttata
ENSPPYG00000007348	CHD9	60	76.103	ENSTRUG00000009125	chd9	73	62.858	Takifugu_rubripes
ENSPPYG00000007348	CHD9	57	81.951	ENSTNIG00000003825	chd9	87	81.951	Tetraodon_nigroviridis
ENSPPYG00000007348	CHD9	66	96.396	ENSTBEG00000016052	-	81	96.396	Tupaia_belangeri
ENSPPYG00000007348	CHD9	90	95.516	ENSTTRG00000012674	CHD9	90	95.516	Tursiops_truncatus
ENSPPYG00000007348	CHD9	64	94.751	ENSUAMG00000022706	CHD9	100	98.168	Ursus_americanus
ENSPPYG00000007348	CHD9	90	94.232	ENSUMAG00000004043	CHD9	98	98.401	Ursus_maritimus
ENSPPYG00000007348	CHD9	97	95.053	ENSVPAG00000001374	CHD9	97	95.053	Vicugna_pacos
ENSPPYG00000007348	CHD9	100	96.416	ENSVVUG00000019435	CHD9	100	96.416	Vulpes_vulpes
ENSPPYG00000007348	CHD9	99	73.533	ENSXETG00000000349	chd9	96	76.908	Xenopus_tropicalis
ENSPPYG00000007348	CHD9	80	70.898	ENSXCOG00000012997	chd9	67	74.910	Xiphophorus_couchianus
ENSPPYG00000007348	CHD9	85	70.389	ENSXMAG00000016192	chd9	97	61.094	Xiphophorus_maculatus