EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPPYG00000007401 (Gene tree)
Gene ID: -
Gene Symbol: USB1
Alias: C16orf57|FLJ13154|HVSL1|Mpn1
Full Name: U6 snRNA biogenesis phosphodiesterase 1
Gene Type: protein_coding
Species: Pongo_abelii
Status: putative
Strand: Plus strand
Length: 21296 bases
Position: chr16:45174516-45195811
Accession: 25792
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPPYP00000008364	HVSL	PF09749.9	1.1e-49	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPPYT00000008705	USB1-201	756	-	ENSPPYP00000008364	252 (aa)	-	H2NR21

Gene Model

Click here to download ENSPPYG00000007401's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPPYG00000007401's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPPYG00000007401	USB1	100	94.048	ENSG00000103005	USB1	95	94.048	Homo_sapiens
ENSPPYG00000007401	USB1	98	43.233	ENSAPOG00000011942	usb1	76	48.598	Acanthochromis_polyacanthus
ENSPPYG00000007401	USB1	100	79.688	ENSAMEG00000017205	USB1	95	79.297	Ailuropoda_melanoleuca
ENSPPYG00000007401	USB1	84	50.237	ENSACIG00000012234	usb1	77	50.237	Amphilophus_citrinellus
ENSPPYG00000007401	USB1	94	47.059	ENSAOCG00000014831	usb1	75	50.467	Amphiprion_ocellaris
ENSPPYG00000007401	USB1	94	47.479	ENSAPEG00000000296	usb1	75	50.935	Amphiprion_percula
ENSPPYG00000007401	USB1	92	48.498	ENSATEG00000009348	usb1	75	51.174	Anabas_testudineus
ENSPPYG00000007401	USB1	84	65.888	ENSAPLG00000002756	USB1	94	65.728	Anas_platyrhynchos
ENSPPYG00000007401	USB1	85	59.722	ENSACAG00000015481	USB1	94	59.722	Anolis_carolinensis
ENSPPYG00000007401	USB1	100	92.063	ENSANAG00000035640	USB1	95	92.063	Aotus_nancymaae
ENSPPYG00000007401	USB1	94	47.881	ENSACLG00000020586	usb1	75	50.704	Astatotilapia_calliptera
ENSPPYG00000007401	USB1	84	47.867	ENSAMXG00000040146	usb1	70	47.867	Astyanax_mexicanus
ENSPPYG00000007401	USB1	100	79.762	ENSBTAG00000015758	USB1	95	79.762	Bos_taurus
ENSPPYG00000007401	USB1	100	92.857	ENSCJAG00000011733	USB1	95	92.857	Callithrix_jacchus
ENSPPYG00000007401	USB1	100	78.462	ENSCAFG00000008556	USB1	69	76.923	Canis_familiaris
ENSPPYG00000007401	USB1	100	79.447	ENSCAFG00020009263	USB1	95	76.245	Canis_lupus_dingo
ENSPPYG00000007401	USB1	100	79.365	ENSCHIG00000024290	USB1	95	79.365	Capra_hircus
ENSPPYG00000007401	USB1	100	86.905	ENSTSYG00000006997	USB1	95	86.905	Carlito_syrichta
ENSPPYG00000007401	USB1	87	65.753	ENSCAPG00000009057	USB1	93	65.753	Cavia_aperea
ENSPPYG00000007401	USB1	100	78.824	ENSCPOG00000014325	USB1	95	78.824	Cavia_porcellus
ENSPPYG00000007401	USB1	100	92.460	ENSCCAG00000022132	USB1	95	92.460	Cebus_capucinus
ENSPPYG00000007401	USB1	100	92.857	ENSCATG00000032174	USB1	95	92.857	Cercocebus_atys
ENSPPYG00000007401	USB1	65	81.595	ENSCLAG00000007363	USB1	92	81.595	Chinchilla_lanigera
ENSPPYG00000007401	USB1	100	93.651	ENSCSAG00000004783	USB1	95	93.651	Chlorocebus_sabaeus
ENSPPYG00000007401	USB1	90	63.877	ENSCPBG00000026943	USB1	95	58.868	Chrysemys_picta_bellii
ENSPPYG00000007401	USB1	71	30.412	ENSCING00000011490	-	69	30.412	Ciona_intestinalis
ENSPPYG00000007401	USB1	77	30.000	ENSCSAVG00000000894	-	71	30.000	Ciona_savignyi
ENSPPYG00000007401	USB1	100	92.857	ENSCANG00000037135	USB1	95	92.857	Colobus_angolensis_palliatus
ENSPPYG00000007401	USB1	100	80.784	ENSCGRG00001011243	USB1	95	80.392	Cricetulus_griseus_chok1gshd
ENSPPYG00000007401	USB1	100	80.784	ENSCGRG00000013252	USB1	95	80.392	Cricetulus_griseus_crigri
ENSPPYG00000007401	USB1	98	44.061	ENSCSEG00000013881	usb1	79	45.909	Cynoglossus_semilaevis
ENSPPYG00000007401	USB1	84	46.512	ENSCVAG00000009252	usb1	91	46.977	Cyprinodon_variegatus
ENSPPYG00000007401	USB1	90	44.248	ENSDARG00000003841	usb1	76	46.445	Danio_rerio
ENSPPYG00000007401	USB1	100	80.159	ENSDORG00000001888	Usb1	95	80.159	Dipodomys_ordii
ENSPPYG00000007401	USB1	69	39.227	FBgn0037713	CG16790	67	39.227	Drosophila_melanogaster
ENSPPYG00000007401	USB1	100	66.142	ENSETEG00000019682	USB1	95	66.142	Echinops_telfairi
ENSPPYG00000007401	USB1	83	46.667	ENSEBUG00000005889	usb1	73	46.667	Eptatretus_burgeri
ENSPPYG00000007401	USB1	100	82.143	ENSEASG00005005484	USB1	95	82.143	Equus_asinus_asinus
ENSPPYG00000007401	USB1	100	83.333	ENSECAG00000019493	USB1	87	83.333	Equus_caballus
ENSPPYG00000007401	USB1	100	55.556	ENSEEUG00000000154	USB1	95	55.556	Erinaceus_europaeus
ENSPPYG00000007401	USB1	94	43.038	ENSELUG00000010974	usb1	78	45.581	Esox_lucius
ENSPPYG00000007401	USB1	100	81.890	ENSFCAG00000002693	USB1	95	81.890	Felis_catus
ENSPPYG00000007401	USB1	85	62.911	ENSFALG00000006876	USB1	94	58.661	Ficedula_albicollis
ENSPPYG00000007401	USB1	100	81.102	ENSFDAG00000010052	USB1	95	81.102	Fukomys_damarensis
ENSPPYG00000007401	USB1	90	45.902	ENSFHEG00000012334	usb1	77	50.769	Fundulus_heteroclitus
ENSPPYG00000007401	USB1	83	48.571	ENSGMOG00000004228	usb1	93	48.571	Gadus_morhua
ENSPPYG00000007401	USB1	83	62.559	ENSGALG00000035604	USB1	83	62.441	Gallus_gallus
ENSPPYG00000007401	USB1	98	45.455	ENSGAFG00000021890	usb1	82	47.391	Gambusia_affinis
ENSPPYG00000007401	USB1	83	50.962	ENSGACG00000003257	usb1	75	50.476	Gasterosteus_aculeatus
ENSPPYG00000007401	USB1	100	59.924	ENSGAGG00000022572	USB1	95	59.231	Gopherus_agassizii
ENSPPYG00000007401	USB1	100	94.841	ENSGGOG00000017147	USB1	95	94.841	Gorilla_gorilla
ENSPPYG00000007401	USB1	94	48.305	ENSHBUG00000009823	usb1	76	50.935	Haplochromis_burtoni
ENSPPYG00000007401	USB1	100	82.283	ENSHGLG00000016078	USB1	93	82.283	Heterocephalus_glaber_female
ENSPPYG00000007401	USB1	100	82.283	ENSHGLG00100005562	USB1	93	82.283	Heterocephalus_glaber_male
ENSPPYG00000007401	USB1	77	54.404	ENSHCOG00000015633	usb1	76	54.271	Hippocampus_comes
ENSPPYG00000007401	USB1	84	50.237	ENSIPUG00000008601	usb1	73	50.237	Ictalurus_punctatus
ENSPPYG00000007401	USB1	100	80.385	ENSSTOG00000007548	USB1	95	78.846	Ictidomys_tridecemlineatus
ENSPPYG00000007401	USB1	100	81.496	ENSJJAG00000021859	Usb1	95	81.496	Jaculus_jaculus
ENSPPYG00000007401	USB1	96	46.311	ENSKMAG00000007200	usb1	71	51.724	Kryptolebias_marmoratus
ENSPPYG00000007401	USB1	79	48.500	ENSLBEG00000008452	usb1	65	48.705	Labrus_bergylta
ENSPPYG00000007401	USB1	82	57.143	ENSLACG00000000105	USB1	72	57.619	Latimeria_chalumnae
ENSPPYG00000007401	USB1	95	49.587	ENSLOCG00000000465	usb1	80	50.439	Lepisosteus_oculatus
ENSPPYG00000007401	USB1	100	61.538	ENSLAFG00000002267	USB1	95	61.923	Loxodonta_africana
ENSPPYG00000007401	USB1	100	93.254	ENSMFAG00000003926	USB1	95	93.254	Macaca_fascicularis
ENSPPYG00000007401	USB1	100	93.254	ENSMMUG00000022669	USB1	95	93.254	Macaca_mulatta
ENSPPYG00000007401	USB1	100	93.254	ENSMNEG00000042487	USB1	95	93.254	Macaca_nemestrina
ENSPPYG00000007401	USB1	100	93.254	ENSMLEG00000028756	USB1	95	93.254	Mandrillus_leucophaeus
ENSPPYG00000007401	USB1	96	46.332	ENSMAMG00000015092	usb1	77	49.767	Mastacembelus_armatus
ENSPPYG00000007401	USB1	94	47.881	ENSMZEG00005010008	usb1	75	50.704	Maylandia_zebra
ENSPPYG00000007401	USB1	100	80.315	ENSMAUG00000007832	Usb1	95	80.315	Mesocricetus_auratus
ENSPPYG00000007401	USB1	100	86.905	ENSMICG00000004900	USB1	96	86.842	Microcebus_murinus
ENSPPYG00000007401	USB1	100	79.528	ENSMOCG00000022647	Usb1	95	79.528	Microtus_ochrogaster
ENSPPYG00000007401	USB1	83	50.000	ENSMMOG00000000490	usb1	81	50.000	Mola_mola
ENSPPYG00000007401	USB1	100	63.922	ENSMODG00000014067	USB1	95	62.353	Monodelphis_domestica
ENSPPYG00000007401	USB1	94	46.218	ENSMALG00000005930	usb1	75	49.533	Monopterus_albus
ENSPPYG00000007401	USB1	100	76.772	MGP_CAROLIEiJ_G0031421	Usb1	100	77.193	Mus_caroli
ENSPPYG00000007401	USB1	100	77.559	ENSMUSG00000031792	Usb1	100	78.070	Mus_musculus
ENSPPYG00000007401	USB1	100	77.165	MGP_PahariEiJ_G0023019	Usb1	100	77.966	Mus_pahari
ENSPPYG00000007401	USB1	100	76.378	MGP_SPRETEiJ_G0032540	Usb1	95	76.378	Mus_spretus
ENSPPYG00000007401	USB1	100	78.125	ENSMPUG00000004684	USB1	91	77.344	Mustela_putorius_furo
ENSPPYG00000007401	USB1	87	83.486	ENSMLUG00000007400	USB1	94	83.486	Myotis_lucifugus
ENSPPYG00000007401	USB1	100	78.906	ENSNGAG00000009703	Usb1	95	78.906	Nannospalax_galili
ENSPPYG00000007401	USB1	94	43.750	ENSNBRG00000008747	usb1	93	49.254	Neolamprologus_brichardi
ENSPPYG00000007401	USB1	99	95.219	ENSNLEG00000003340	USB1	100	95.219	Nomascus_leucogenys
ENSPPYG00000007401	USB1	60	54.777	ENSMEUG00000003328	-	100	55.556	Notamacropus_eugenii
ENSPPYG00000007401	USB1	54	75.556	ENSOPRG00000011803	USB1	58	75.556	Ochotona_princeps
ENSPPYG00000007401	USB1	100	78.740	ENSODEG00000016214	USB1	95	78.740	Octodon_degus
ENSPPYG00000007401	USB1	98	45.353	ENSONIG00000011063	usb1	76	50.467	Oreochromis_niloticus
ENSPPYG00000007401	USB1	84	69.340	ENSOANG00000012118	USB1	88	69.340	Ornithorhynchus_anatinus
ENSPPYG00000007401	USB1	92	46.320	ENSORLG00000012479	usb1	76	49.048	Oryzias_latipes
ENSPPYG00000007401	USB1	92	46.753	ENSORLG00020018671	usb1	92	46.032	Oryzias_latipes_hni
ENSPPYG00000007401	USB1	83	49.524	ENSORLG00015009679	usb1	77	49.524	Oryzias_latipes_hsok
ENSPPYG00000007401	USB1	81	49.510	ENSOMEG00000012930	usb1	73	49.510	Oryzias_melastigma
ENSPPYG00000007401	USB1	100	78.571	ENSOGAG00000003273	USB1	94	78.571	Otolemur_garnettii
ENSPPYG00000007401	USB1	95	77.500	ENSOARG00000001107	USB1	88	79.565	Ovis_aries
ENSPPYG00000007401	USB1	100	94.444	ENSPPAG00000042137	USB1	95	94.444	Pan_paniscus
ENSPPYG00000007401	USB1	100	81.890	ENSPPRG00000024797	USB1	95	81.890	Panthera_pardus
ENSPPYG00000007401	USB1	100	81.890	ENSPTIG00000007506	USB1	95	81.890	Panthera_tigris_altaica
ENSPPYG00000007401	USB1	100	86.905	ENSPTRG00000008172	USB1	93	93.532	Pan_troglodytes
ENSPPYG00000007401	USB1	100	93.254	ENSPANG00000025138	USB1	95	93.254	Papio_anubis
ENSPPYG00000007401	USB1	96	47.967	ENSPKIG00000015109	usb1	71	51.659	Paramormyrops_kingsleyae
ENSPPYG00000007401	USB1	84	49.765	ENSPSIG00000004305	USB1	94	49.765	Pelodiscus_sinensis
ENSPPYG00000007401	USB1	84	48.341	ENSPMGG00000017725	usb1	80	48.341	Periophthalmus_magnuspinnatus
ENSPPYG00000007401	USB1	100	77.992	ENSPEMG00000016183	Usb1	95	77.992	Peromyscus_maniculatus_bairdii
ENSPPYG00000007401	USB1	88	47.321	ENSPMAG00000000462	usb1	94	47.321	Petromyzon_marinus
ENSPPYG00000007401	USB1	98	45.627	ENSPFOG00000011130	usb1	77	48.837	Poecilia_formosa
ENSPPYG00000007401	USB1	98	45.627	ENSPLAG00000009820	usb1	77	48.837	Poecilia_latipinna
ENSPPYG00000007401	USB1	98	45.076	ENSPMEG00000006402	usb1	77	48.837	Poecilia_mexicana
ENSPPYG00000007401	USB1	90	45.492	ENSPREG00000001047	usb1	78	50.769	Poecilia_reticulata
ENSPPYG00000007401	USB1	100	87.698	ENSPCOG00000022612	USB1	96	86.842	Propithecus_coquereli
ENSPPYG00000007401	USB1	100	76.984	ENSPVAG00000004613	USB1	95	76.984	Pteropus_vampyrus
ENSPPYG00000007401	USB1	94	48.305	ENSPNYG00000022262	usb1	76	50.935	Pundamilia_nyererei
ENSPPYG00000007401	USB1	98	44.758	ENSPNAG00000011736	usb1	71	48.815	Pygocentrus_nattereri
ENSPPYG00000007401	USB1	100	79.134	ENSRNOG00000013216	Usb1	95	79.134	Rattus_norvegicus
ENSPPYG00000007401	USB1	100	86.508	ENSRBIG00000044466	USB1	96	91.447	Rhinopithecus_bieti
ENSPPYG00000007401	USB1	100	93.651	ENSRROG00000029211	USB1	95	93.651	Rhinopithecus_roxellana
ENSPPYG00000007401	USB1	100	91.270	ENSSBOG00000029362	USB1	95	91.270	Saimiri_boliviensis_boliviensis
ENSPPYG00000007401	USB1	82	68.932	ENSSHAG00000006993	USB1	88	66.964	Sarcophilus_harrisii
ENSPPYG00000007401	USB1	89	52.212	ENSSFOG00015023663	usb1	71	52.212	Scleropages_formosus
ENSPPYG00000007401	USB1	96	47.674	ENSSMAG00000015834	usb1	77	49.345	Scophthalmus_maximus
ENSPPYG00000007401	USB1	82	52.913	ENSSDUG00000002949	usb1	76	52.913	Seriola_dumerili
ENSPPYG00000007401	USB1	83	52.404	ENSSLDG00000014174	usb1	74	52.404	Seriola_lalandi_dorsalis
ENSPPYG00000007401	USB1	80	64.179	ENSSPUG00000006741	USB1	93	64.179	Sphenodon_punctatus
ENSPPYG00000007401	USB1	83	49.761	ENSSPAG00000007484	usb1	73	49.761	Stegastes_partitus
ENSPPYG00000007401	USB1	100	79.688	ENSSSCG00000002807	USB1	95	78.125	Sus_scrofa
ENSPPYG00000007401	USB1	79	65.829	ENSTGUG00000004792	USB1	81	64.593	Taeniopygia_guttata
ENSPPYG00000007401	USB1	98	47.843	ENSTRUG00000021069	usb1	81	49.091	Takifugu_rubripes
ENSPPYG00000007401	USB1	98	41.667	ENSTNIG00000000626	usb1	78	43.602	Tetraodon_nigroviridis
ENSPPYG00000007401	USB1	87	56.164	ENSTBEG00000001507	USB1	94	56.164	Tupaia_belangeri
ENSPPYG00000007401	USB1	100	79.688	ENSUAMG00000016823	USB1	95	79.688	Ursus_americanus
ENSPPYG00000007401	USB1	80	82.587	ENSUMAG00000021369	USB1	93	82.587	Ursus_maritimus
ENSPPYG00000007401	USB1	81	57.353	ENSVPAG00000009834	-	59	80.992	Vicugna_pacos
ENSPPYG00000007401	USB1	100	78.516	ENSVVUG00000023700	USB1	88	80.786	Vulpes_vulpes
ENSPPYG00000007401	USB1	81	52.913	ENSXETG00000013795	usb1	89	51.339	Xenopus_tropicalis
ENSPPYG00000007401	USB1	94	46.835	ENSXMAG00000024687	usb1	64	50.505	Xiphophorus_maculatus