EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPPYG00000007924 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Pongo_abelii
Status: putative
Strand: Plus strand
Length: 28978 bases
Position: chr17:7501654-7530631
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPPYP00000008911	RNA_pol_Rpb1_5	PF04998.17	5.5e-101	1	1
ENSPPYP00000008911	RNA_pol_Rpb1_R	PF05001.13	1.8e-19	1	24
ENSPPYP00000008911	RNA_pol_Rpb1_R	PF05001.13	1.8e-19	2	24
ENSPPYP00000008911	RNA_pol_Rpb1_R	PF05001.13	1.8e-19	3	24
ENSPPYP00000008911	RNA_pol_Rpb1_R	PF05001.13	1.8e-19	4	24
ENSPPYP00000008911	RNA_pol_Rpb1_R	PF05001.13	1.8e-19	5	24
ENSPPYP00000008911	RNA_pol_Rpb1_R	PF05001.13	1.8e-19	6	24
ENSPPYP00000008911	RNA_pol_Rpb1_R	PF05001.13	1.8e-19	7	24
ENSPPYP00000008911	RNA_pol_Rpb1_R	PF05001.13	1.8e-19	8	24
ENSPPYP00000008911	RNA_pol_Rpb1_R	PF05001.13	1.8e-19	9	24
ENSPPYP00000008911	RNA_pol_Rpb1_R	PF05001.13	1.8e-19	10	24
ENSPPYP00000008911	RNA_pol_Rpb1_R	PF05001.13	1.8e-19	11	24
ENSPPYP00000008911	RNA_pol_Rpb1_R	PF05001.13	1.8e-19	12	24
ENSPPYP00000008911	RNA_pol_Rpb1_R	PF05001.13	1.8e-19	13	24
ENSPPYP00000008911	RNA_pol_Rpb1_R	PF05001.13	1.8e-19	14	24
ENSPPYP00000008911	RNA_pol_Rpb1_R	PF05001.13	1.8e-19	15	24
ENSPPYP00000008911	RNA_pol_Rpb1_R	PF05001.13	1.8e-19	16	24
ENSPPYP00000008911	RNA_pol_Rpb1_R	PF05001.13	1.8e-19	17	24
ENSPPYP00000008911	RNA_pol_Rpb1_R	PF05001.13	1.8e-19	18	24
ENSPPYP00000008911	RNA_pol_Rpb1_R	PF05001.13	1.8e-19	19	24
ENSPPYP00000008911	RNA_pol_Rpb1_R	PF05001.13	1.8e-19	20	24
ENSPPYP00000008911	RNA_pol_Rpb1_R	PF05001.13	1.8e-19	21	24
ENSPPYP00000008911	RNA_pol_Rpb1_R	PF05001.13	1.8e-19	22	24
ENSPPYP00000008911	RNA_pol_Rpb1_R	PF05001.13	1.8e-19	23	24
ENSPPYP00000008911	RNA_pol_Rpb1_R	PF05001.13	1.8e-19	24	24
ENSPPYP00000008911	RNA_pol_Rpb1_4	PF05000.17	3.1e-38	1	1
ENSPPYP00000008911	RNA_pol_Rpb1_2	PF00623.20	9.9e-75	1	1
ENSPPYP00000008911	RNA_pol_Rpb1_3	PF04983.18	7.4e-50	1	1
ENSPPYP00000008911	RNA_pol_Rpb1_1	PF04997.12	4.7e-109	1	1
ENSPPYP00000008911	RNA_pol_Rpb1_7	PF04990.12	1.8e-54	1	1
ENSPPYP00000008911	RNA_pol_Rpb1_6	PF04992.14	1.2e-67	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPPYT00000009276	-	5871	-	ENSPPYP00000008911	1956 (aa)	-	H2NSK0

Gene Model

Click here to download ENSPPYG00000007924's gene model file

Pathways

Pathway ID	Pathway Name	Source
pon03020	RNA polymerase	KEGG
pon05016	Huntington disease	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPPYG00000007924's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPPYG00000007924	-	62	39.099	ENSPPYG00000002305	POLR3A	91	39.099
ENSPPYG00000007924	-	52	36.517	ENSPPYG00000012217	POLR1A	88	30.769

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPPYG00000007924	-	87	94.482	ENSAPOG00000006552	polr2a	91	94.475	Acanthochromis_polyacanthus
ENSPPYG00000007924	-	100	98.633	ENSAMEG00000016265	-	100	96.506	Ailuropoda_melanoleuca
ENSPPYG00000007924	-	82	91.878	ENSACIG00000015982	polr2a	81	92.489	Amphilophus_citrinellus
ENSPPYG00000007924	-	89	94.544	ENSAOCG00000004255	polr2a	91	94.538	Amphiprion_ocellaris
ENSPPYG00000007924	-	82	94.544	ENSAPEG00000012623	polr2a	82	94.538	Amphiprion_percula
ENSPPYG00000007924	-	82	94.420	ENSATEG00000019644	polr2a	82	94.413	Anabas_testudineus
ENSPPYG00000007924	-	100	97.363	ENSACAG00000014561	POLR2A	100	95.233	Anolis_carolinensis
ENSPPYG00000007924	-	100	98.935	ENSANAG00000020093	-	100	96.805	Aotus_nancymaae
ENSPPYG00000007924	-	82	94.234	ENSACLG00000006735	polr2a	82	94.227	Astatotilapia_calliptera
ENSPPYG00000007924	-	82	94.792	ENSAMXG00000020046	polr2a	82	94.786	Astyanax_mexicanus
ENSPPYG00000007924	-	100	98.884	ENSBTAG00000046765	POLR2A	100	96.755	Bos_taurus
ENSPPYG00000007924	-	97	70.025	WBGene00000123	ama-1	99	72.727	Caenorhabditis_elegans
ENSPPYG00000007924	-	100	98.479	ENSCAFG00000016532	POLR2A	100	98.376	Canis_familiaris
ENSPPYG00000007924	-	100	97.973	ENSCAFG00020007929	-	100	95.844	Canis_lupus_dingo
ENSPPYG00000007924	-	100	98.884	ENSCHIG00000027173	-	100	96.755	Capra_hircus
ENSPPYG00000007924	-	100	96.450	ENSTSYG00000012803	-	100	96.170	Carlito_syrichta
ENSPPYG00000007924	-	98	94.059	ENSCAPG00000001882	-	98	98.543	Cavia_aperea
ENSPPYG00000007924	-	100	94.262	ENSCPOG00000014812	-	98	98.571	Cavia_porcellus
ENSPPYG00000007924	-	100	98.935	ENSCCAG00000020938	-	100	96.805	Cebus_capucinus
ENSPPYG00000007924	-	100	98.884	ENSCATG00000013680	-	100	96.755	Cercocebus_atys
ENSPPYG00000007924	-	100	98.783	ENSCLAG00000012196	-	100	96.653	Chinchilla_lanigera
ENSPPYG00000007924	-	100	91.372	ENSCSAG00000011644	-	100	89.253	Chlorocebus_sabaeus
ENSPPYG00000007924	-	100	92.901	ENSCPBG00000012697	POLR2A	100	91.963	Chrysemys_picta_bellii
ENSPPYG00000007924	-	99	72.147	ENSCING00000007884	-	99	76.689	Ciona_intestinalis
ENSPPYG00000007924	-	94	83.333	ENSCSAVG00000008334	-	99	80.180	Ciona_savignyi
ENSPPYG00000007924	-	100	98.225	ENSCANG00000010622	-	100	96.095	Colobus_angolensis_palliatus
ENSPPYG00000007924	-	94	92.551	ENSCGRG00001003538	Polr2a	100	90.132	Cricetulus_griseus_chok1gshd
ENSPPYG00000007924	-	82	96.135	ENSCGRG00000012105	Polr2a	85	96.074	Cricetulus_griseus_crigri
ENSPPYG00000007924	-	82	93.800	ENSCSEG00000002635	polr2a	82	93.793	Cynoglossus_semilaevis
ENSPPYG00000007924	-	82	94.668	ENSCVAG00000005156	polr2a	82	94.662	Cyprinodon_variegatus
ENSPPYG00000007924	-	82	94.486	ENSDARG00000099966	polr2a	82	94.479	Danio_rerio
ENSPPYG00000007924	-	100	95.943	ENSDNOG00000016482	-	100	93.813	Dasypus_novemcinctus
ENSPPYG00000007924	-	100	98.935	ENSDORG00000008667	Polr2a	100	96.805	Dipodomys_ordii
ENSPPYG00000007924	-	94	87.656	ENSETEG00000002540	-	94	85.960	Echinops_telfairi
ENSPPYG00000007924	-	82	88.022	ENSEBUG00000013967	polr2a	82	87.430	Eptatretus_burgeri
ENSPPYG00000007924	-	82	97.890	ENSEASG00005019114	-	83	97.890	Equus_asinus_asinus
ENSPPYG00000007924	-	100	98.884	ENSECAG00000018485	POLR2A	100	96.755	Equus_caballus
ENSPPYG00000007924	-	86	99.800	ENSEEUG00000001154	-	95	99.800	Erinaceus_europaeus
ENSPPYG00000007924	-	89	90.018	ENSELUG00000014284	polr2a	84	90.685	Esox_lucius
ENSPPYG00000007924	-	100	98.884	ENSFDAG00000008287	-	100	96.755	Fukomys_damarensis
ENSPPYG00000007924	-	82	94.668	ENSFHEG00000001768	polr2a	95	94.662	Fundulus_heteroclitus
ENSPPYG00000007924	-	99	90.361	ENSGMOG00000007725	polr2a	100	100.000	Gadus_morhua
ENSPPYG00000007924	-	98	94.366	ENSGAFG00000005389	polr2a	99	92.427	Gambusia_affinis
ENSPPYG00000007924	-	99	90.750	ENSGACG00000019366	polr2a	100	88.249	Gasterosteus_aculeatus
ENSPPYG00000007924	-	100	97.115	ENSGGOG00000014800	-	100	94.990	Gorilla_gorilla
ENSPPYG00000007924	-	85	91.569	ENSHBUG00000018937	polr2a	95	94.227	Haplochromis_burtoni
ENSPPYG00000007924	-	100	98.884	ENSHGLG00000012381	POLR2A	100	96.755	Heterocephalus_glaber_female
ENSPPYG00000007924	-	100	98.884	ENSHGLG00100014843	POLR2A	100	96.755	Heterocephalus_glaber_male
ENSPPYG00000007924	-	82	93.924	ENSHCOG00000011874	polr2a	82	93.917	Hippocampus_comes
ENSPPYG00000007924	-	82	94.172	ENSIPUG00000002613	Polr2a	82	94.165	Ictalurus_punctatus
ENSPPYG00000007924	-	100	98.935	ENSSTOG00000001304	-	100	96.805	Ictidomys_tridecemlineatus
ENSPPYG00000007924	-	100	98.834	ENSJJAG00000013049	Polr2a	100	96.704	Jaculus_jaculus
ENSPPYG00000007924	-	81	85.229	ENSKMAG00000016343	polr2a	86	89.286	Kryptolebias_marmoratus
ENSPPYG00000007924	-	82	94.172	ENSLBEG00000027652	polr2a	82	94.165	Labrus_bergylta
ENSPPYG00000007924	-	81	87.097	ENSLACG00000012071	POLR2A	81	87.152	Latimeria_chalumnae
ENSPPYG00000007924	-	91	94.840	ENSLOCG00000013863	polr2a	86	94.534	Lepisosteus_oculatus
ENSPPYG00000007924	-	100	98.884	ENSLAFG00000008626	-	100	96.755	Loxodonta_africana
ENSPPYG00000007924	-	50	98.366	ENSMFAG00000007042	-	99	98.366	Macaca_fascicularis
ENSPPYG00000007924	-	100	98.884	ENSMMUG00000023620	-	100	96.755	Macaca_mulatta
ENSPPYG00000007924	-	100	98.181	ENSMNEG00000040407	-	100	96.216	Macaca_nemestrina
ENSPPYG00000007924	-	99	93.962	ENSMLEG00000030263	-	99	98.366	Mandrillus_leucophaeus
ENSPPYG00000007924	-	82	94.296	ENSMAMG00000003351	polr2a	82	94.289	Mastacembelus_armatus
ENSPPYG00000007924	-	82	94.234	ENSMZEG00005021429	polr2a	82	94.227	Maylandia_zebra
ENSPPYG00000007924	-	50	100.000	ENSMAUG00000021055	-	99	100.000	Mesocricetus_auratus
ENSPPYG00000007924	-	100	98.834	ENSMICG00000013372	-	98	98.772	Microcebus_murinus
ENSPPYG00000007924	-	99	95.297	ENSMOCG00000018279	Polr2a	94	95.297	Microtus_ochrogaster
ENSPPYG00000007924	-	82	93.800	ENSMMOG00000012515	polr2a	91	93.793	Mola_mola
ENSPPYG00000007924	-	100	98.479	ENSMODG00000007009	-	100	96.349	Monodelphis_domestica
ENSPPYG00000007924	-	95	94.431	ENSMALG00000008716	polr2a	98	92.365	Monopterus_albus
ENSPPYG00000007924	-	100	98.884	MGP_CAROLIEiJ_G0016587	Polr2a	100	96.755	Mus_caroli
ENSPPYG00000007924	-	100	98.884	ENSMUSG00000005198	Polr2a	100	96.755	Mus_musculus
ENSPPYG00000007924	-	100	97.120	MGP_PahariEiJ_G0017718	Polr2a	100	94.997	Mus_pahari
ENSPPYG00000007924	-	100	98.884	MGP_SPRETEiJ_G0017423	Polr2a	100	96.755	Mus_spretus
ENSPPYG00000007924	-	100	98.834	ENSMPUG00000009648	-	100	96.704	Mustela_putorius_furo
ENSPPYG00000007924	-	100	98.430	ENSMLUG00000009088	-	100	96.302	Myotis_lucifugus
ENSPPYG00000007924	-	100	98.935	ENSNGAG00000002543	Polr2a	100	96.805	Nannospalax_galili
ENSPPYG00000007924	-	82	91.631	ENSNBRG00000002005	polr2a	81	92.179	Neolamprologus_brichardi
ENSPPYG00000007924	-	100	97.723	ENSNLEG00000009460	-	100	95.597	Nomascus_leucogenys
ENSPPYG00000007924	-	94	99.455	ENSMEUG00000008611	-	93	99.455	Notamacropus_eugenii
ENSPPYG00000007924	-	81	99.747	ENSOPRG00000015116	-	99	99.747	Ochotona_princeps
ENSPPYG00000007924	-	100	92.300	ENSODEG00000017674	-	100	94.944	Octodon_degus
ENSPPYG00000007924	-	82	94.420	ENSONIG00000009231	polr2a	82	94.413	Oreochromis_niloticus
ENSPPYG00000007924	-	100	97.321	ENSOCUG00000017929	-	100	97.321	Oryctolagus_cuniculus
ENSPPYG00000007924	-	82	94.296	ENSORLG00000006431	polr2a	82	94.289	Oryzias_latipes
ENSPPYG00000007924	-	82	94.296	ENSORLG00020010235	polr2a	82	94.289	Oryzias_latipes_hni
ENSPPYG00000007924	-	82	94.296	ENSORLG00015007075	polr2a	82	94.289	Oryzias_latipes_hsok
ENSPPYG00000007924	-	91	94.406	ENSOMEG00000010713	polr2a	100	94.406	Oryzias_melastigma
ENSPPYG00000007924	-	100	98.783	ENSOGAG00000033608	-	100	96.653	Otolemur_garnettii
ENSPPYG00000007924	-	99	98.679	ENSOARG00000013874	-	100	97.269	Ovis_aries
ENSPPYG00000007924	-	100	96.583	ENSPPAG00000043734	-	100	97.093	Pan_paniscus
ENSPPYG00000007924	-	100	97.723	ENSPTRG00000008691	POLR2A	100	95.597	Pan_troglodytes
ENSPPYG00000007924	-	100	98.225	ENSPANG00000024099	-	100	96.095	Papio_anubis
ENSPPYG00000007924	-	80	92.620	ENSPKIG00000005727	polr2a	85	82.000	Paramormyrops_kingsleyae
ENSPPYG00000007924	-	98	96.478	ENSPSIG00000014006	POLR2A	100	96.478	Pelodiscus_sinensis
ENSPPYG00000007924	-	100	94.225	ENSPMGG00000019734	polr2a	99	94.662	Periophthalmus_magnuspinnatus
ENSPPYG00000007924	-	100	98.935	ENSPEMG00000012521	Polr2a	100	96.805	Peromyscus_maniculatus_bairdii
ENSPPYG00000007924	-	95	87.368	ENSPCIG00000028851	-	96	87.368	Phascolarctos_cinereus
ENSPPYG00000007924	-	82	94.606	ENSPLAG00000007399	polr2a	93	90.385	Poecilia_latipinna
ENSPPYG00000007924	-	86	91.816	ENSPMEG00000002071	polr2a	93	92.427	Poecilia_mexicana
ENSPPYG00000007924	-	82	94.544	ENSPREG00000013122	polr2a	82	94.538	Poecilia_reticulata
ENSPPYG00000007924	-	92	99.868	ENSPCAG00000006951	-	92	99.868	Procavia_capensis
ENSPPYG00000007924	-	100	97.735	ENSPCOG00000025260	-	100	95.622	Propithecus_coquereli
ENSPPYG00000007924	-	100	98.682	ENSPVAG00000005069	-	100	96.552	Pteropus_vampyrus
ENSPPYG00000007924	-	94	94.499	ENSPNYG00000022340	polr2a	96	87.391	Pundamilia_nyererei
ENSPPYG00000007924	-	82	94.606	ENSPNAG00000011237	polr2a	82	94.600	Pygocentrus_nattereri
ENSPPYG00000007924	-	100	98.834	ENSRNOG00000028834	Polr2a	100	96.704	Rattus_norvegicus
ENSPPYG00000007924	-	92	97.145	ENSRBIG00000002471	-	100	97.188	Rhinopithecus_bieti
ENSPPYG00000007924	-	100	99.237	ENSRROG00000029583	-	100	99.237	Rhinopithecus_roxellana
ENSPPYG00000007924	-	84	88.000	YDL140C	RPO21	99	80.180	Saccharomyces_cerevisiae
ENSPPYG00000007924	-	100	98.935	ENSSBOG00000000808	-	100	96.805	Saimiri_boliviensis_boliviensis
ENSPPYG00000007924	-	92	99.441	ENSSHAG00000002858	-	100	97.699	Sarcophilus_harrisii
ENSPPYG00000007924	-	82	94.544	ENSSFOG00015023275	polr2a	82	94.538	Scleropages_formosus
ENSPPYG00000007924	-	82	93.924	ENSSMAG00000009137	polr2a	82	93.917	Scophthalmus_maximus
ENSPPYG00000007924	-	82	94.420	ENSSDUG00000020466	polr2a	82	94.413	Seriola_dumerili
ENSPPYG00000007924	-	82	94.420	ENSSLDG00000020613	polr2a	82	94.413	Seriola_lalandi_dorsalis
ENSPPYG00000007924	-	97	95.036	ENSSARG00000005875	-	99	95.036	Sorex_araneus
ENSPPYG00000007924	-	100	94.482	ENSSPAG00000016741	polr2a	94	94.475	Stegastes_partitus
ENSPPYG00000007924	-	100	98.174	ENSSSCG00000028278	-	100	96.045	Sus_scrofa
ENSPPYG00000007924	-	98	88.600	ENSTRUG00000012320	polr2a	81	88.586	Takifugu_rubripes
ENSPPYG00000007924	-	86	92.932	ENSTNIG00000010136	polr2a	100	92.924	Tetraodon_nigroviridis
ENSPPYG00000007924	-	74	100.000	ENSTBEG00000013294	-	58	100.000	Tupaia_belangeri
ENSPPYG00000007924	-	100	97.363	ENSTTRG00000014273	-	100	95.233	Tursiops_truncatus
ENSPPYG00000007924	-	96	95.142	ENSUAMG00000014866	-	100	99.567	Ursus_americanus
ENSPPYG00000007924	-	99	96.114	ENSUMAG00000015732	-	100	93.564	Ursus_maritimus
ENSPPYG00000007924	-	65	100.000	ENSVPAG00000008842	-	76	100.000	Vicugna_pacos
ENSPPYG00000007924	-	100	99.182	ENSVVUG00000027878	-	100	99.182	Vulpes_vulpes
ENSPPYG00000007924	-	99	95.897	ENSXETG00000012465	polr2a	100	94.564	Xenopus_tropicalis
ENSPPYG00000007924	-	97	92.105	ENSXCOG00000001804	polr2a	94	92.365	Xiphophorus_couchianus
ENSPPYG00000007924	-	82	94.544	ENSXMAG00000015687	polr2a	82	94.538	Xiphophorus_maculatus