EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPPYG00000007940 (Gene tree)
Gene ID: -
Gene Symbol: CHD3
Alias: Mi-2a|Mi2-ALPHA|ZFH
Full Name: chromodomain helicase DNA binding protein 3
Gene Type: protein_coding
Species: Pongo_abelii
Status: putative
Strand: Plus strand
Length: 24284 bases
Position: chr17:7894646-7918929
Accession: 1918
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPPYP00000008928	ResIII	PF04851.15	1.4e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPPYT00000009294	CHD3-201	5757	-	ENSPPYP00000008928	1918 (aa)	-	H2NSL6

Gene Model

Click here to download ENSPPYG00000007940's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPPYG00000007940's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPPYG00000007940	CHD3	89	74.308	ENSPPYG00000001952	CHD5	98	66.102
ENSPPYG00000007940	CHD3	91	67.465	ENSPPYG00000004192	-	96	66.073

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPPYG00000007940	CHD3	100	94.900	ENSG00000170004	CHD3	100	94.900	Homo_sapiens
ENSPPYG00000007940	CHD3	80	79.688	ENSAPOG00000005614	chd3	94	79.688	Acanthochromis_polyacanthus
ENSPPYG00000007940	CHD3	70	95.601	ENSAMEG00000003025	-	100	95.601	Ailuropoda_melanoleuca
ENSPPYG00000007940	CHD3	83	75.630	ENSACIG00000019671	chd3	99	77.690	Amphilophus_citrinellus
ENSPPYG00000007940	CHD3	80	80.729	ENSAOCG00000023784	chd3	97	80.729	Amphiprion_ocellaris
ENSPPYG00000007940	CHD3	76	74.511	ENSAPEG00000006341	chd3	95	71.550	Amphiprion_percula
ENSPPYG00000007940	CHD3	98	70.582	ENSATEG00000000848	chd3	99	70.892	Anabas_testudineus
ENSPPYG00000007940	CHD3	98	82.425	ENSACAG00000004276	CHD3	94	82.338	Anolis_carolinensis
ENSPPYG00000007940	CHD3	100	92.497	ENSANAG00000034323	CHD3	99	96.186	Aotus_nancymaae
ENSPPYG00000007940	CHD3	92	78.816	ENSACLG00000009222	chd3	99	71.664	Astatotilapia_calliptera
ENSPPYG00000007940	CHD3	98	95.391	ENSBTAG00000014377	CHD3	96	95.349	Bos_taurus
ENSPPYG00000007940	CHD3	98	96.475	ENSCJAG00000014766	CHD3	99	94.494	Callithrix_jacchus
ENSPPYG00000007940	CHD3	100	93.203	ENSCAFG00000016859	CHD3	100	93.203	Canis_familiaris
ENSPPYG00000007940	CHD3	96	95.578	ENSCAFG00020007422	CHD3	100	95.636	Canis_lupus_dingo
ENSPPYG00000007940	CHD3	99	93.936	ENSCHIG00000016737	CHD3	100	93.936	Capra_hircus
ENSPPYG00000007940	CHD3	100	94.153	ENSTSYG00000035658	CHD3	100	94.153	Carlito_syrichta
ENSPPYG00000007940	CHD3	99	90.166	ENSCAPG00000014864	CHD3	99	90.166	Cavia_aperea
ENSPPYG00000007940	CHD3	99	92.674	ENSCPOG00000022653	CHD3	99	92.674	Cavia_porcellus
ENSPPYG00000007940	CHD3	98	96.371	ENSCCAG00000034792	CHD3	100	94.350	Cebus_capucinus
ENSPPYG00000007940	CHD3	100	94.700	ENSCATG00000041717	CHD3	100	94.700	Cercocebus_atys
ENSPPYG00000007940	CHD3	98	95.544	ENSCLAG00000010523	CHD3	98	95.544	Chinchilla_lanigera
ENSPPYG00000007940	CHD3	98	96.267	ENSCSAG00000011122	CHD3	98	96.267	Chlorocebus_sabaeus
ENSPPYG00000007940	CHD3	91	80.067	ENSCPBG00000011966	CHD3	99	83.637	Chrysemys_picta_bellii
ENSPPYG00000007940	CHD3	100	94.650	ENSCANG00000037641	CHD3	100	94.650	Colobus_angolensis_palliatus
ENSPPYG00000007940	CHD3	98	93.993	ENSCGRG00001011306	Chd3	98	93.993	Cricetulus_griseus_chok1gshd
ENSPPYG00000007940	CHD3	92	90.909	ENSCGRG00000007878	Chd3	97	90.909	Cricetulus_griseus_crigri
ENSPPYG00000007940	CHD3	91	79.605	ENSCSEG00000004489	chd3	99	75.522	Cynoglossus_semilaevis
ENSPPYG00000007940	CHD3	86	86.266	ENSCVAG00000007293	chd3	94	86.266	Cyprinodon_variegatus
ENSPPYG00000007940	CHD3	89	82.215	ENSDARG00000021405	chd3	95	79.125	Danio_rerio
ENSPPYG00000007940	CHD3	98	82.006	ENSDNOG00000047846	CHD3	88	91.003	Dasypus_novemcinctus
ENSPPYG00000007940	CHD3	98	94.971	ENSDORG00000010713	Chd3	98	94.971	Dipodomys_ordii
ENSPPYG00000007940	CHD3	96	89.259	ENSETEG00000017733	CHD3	98	89.259	Echinops_telfairi
ENSPPYG00000007940	CHD3	54	73.564	ENSEBUG00000008310	chd3	99	67.265	Eptatretus_burgeri
ENSPPYG00000007940	CHD3	93	95.908	ENSEASG00005019360	CHD3	100	95.908	Equus_asinus_asinus
ENSPPYG00000007940	CHD3	93	95.963	ENSECAG00000010051	CHD3	100	95.963	Equus_caballus
ENSPPYG00000007940	CHD3	91	98.305	ENSEEUG00000015205	CHD3	91	98.305	Erinaceus_europaeus
ENSPPYG00000007940	CHD3	81	73.669	ENSELUG00000019499	chd3	99	74.020	Esox_lucius
ENSPPYG00000007940	CHD3	98	95.285	ENSFCAG00000009629	CHD3	94	95.285	Felis_catus
ENSPPYG00000007940	CHD3	95	95.571	ENSFDAG00000008220	CHD3	95	95.571	Fukomys_damarensis
ENSPPYG00000007940	CHD3	89	79.145	ENSGMOG00000013599	chd3	90	79.029	Gadus_morhua
ENSPPYG00000007940	CHD3	59	72.797	ENSGAFG00000004055	chd3	99	74.213	Gambusia_affinis
ENSPPYG00000007940	CHD3	98	68.638	ENSGACG00000019275	chd3	99	68.893	Gasterosteus_aculeatus
ENSPPYG00000007940	CHD3	76	82.207	ENSGAGG00000013164	CHD3	98	82.308	Gopherus_agassizii
ENSPPYG00000007940	CHD3	100	94.750	ENSGGOG00000013496	CHD3	100	94.750	Gorilla_gorilla
ENSPPYG00000007940	CHD3	98	95.389	ENSHGLG00000012017	CHD3	97	95.389	Heterocephalus_glaber_female
ENSPPYG00000007940	CHD3	87	87.826	ENSHGLG00100013902	CHD3	98	87.826	Heterocephalus_glaber_male
ENSPPYG00000007940	CHD3	95	70.346	ENSHCOG00000010170	chd3	95	71.546	Hippocampus_comes
ENSPPYG00000007940	CHD3	86	75.635	ENSIPUG00000003271	chd3	96	77.723	Ictalurus_punctatus
ENSPPYG00000007940	CHD3	98	96.008	ENSSTOG00000025907	CHD3	98	96.008	Ictidomys_tridecemlineatus
ENSPPYG00000007940	CHD3	98	94.715	ENSJJAG00000017633	Chd3	98	94.715	Jaculus_jaculus
ENSPPYG00000007940	CHD3	83	90.047	ENSKMAG00000019292	chd3	99	71.614	Kryptolebias_marmoratus
ENSPPYG00000007940	CHD3	91	71.010	ENSLBEG00000028485	chd3	91	80.620	Labrus_bergylta
ENSPPYG00000007940	CHD3	96	71.814	ENSLACG00000008031	CHD3	97	71.795	Latimeria_chalumnae
ENSPPYG00000007940	CHD3	98	74.799	ENSLOCG00000013965	chd3	95	74.838	Lepisosteus_oculatus
ENSPPYG00000007940	CHD3	94	91.180	ENSLAFG00000000572	CHD3	98	91.180	Loxodonta_africana
ENSPPYG00000007940	CHD3	100	94.650	ENSMFAG00000020113	CHD3	100	94.650	Macaca_fascicularis
ENSPPYG00000007940	CHD3	100	92.300	ENSMMUG00000022221	CHD3	100	92.300	Macaca_mulatta
ENSPPYG00000007940	CHD3	100	94.650	ENSMNEG00000001728	CHD3	99	96.066	Macaca_nemestrina
ENSPPYG00000007940	CHD3	100	94.700	ENSMLEG00000032249	CHD3	100	94.700	Mandrillus_leucophaeus
ENSPPYG00000007940	CHD3	86	72.468	ENSMAMG00000000564	chd3	99	73.404	Mastacembelus_armatus
ENSPPYG00000007940	CHD3	98	93.734	ENSMAUG00000013873	Chd3	99	91.689	Mesocricetus_auratus
ENSPPYG00000007940	CHD3	98	95.959	ENSMICG00000008741	CHD3	100	91.109	Microcebus_murinus
ENSPPYG00000007940	CHD3	98	94.511	ENSMOCG00000004848	Chd3	98	94.511	Microtus_ochrogaster
ENSPPYG00000007940	CHD3	96	71.489	ENSMMOG00000012699	chd3	99	71.301	Mola_mola
ENSPPYG00000007940	CHD3	93	90.185	ENSMODG00000007509	CHD3	100	90.185	Monodelphis_domestica
ENSPPYG00000007940	CHD3	98	93.792	MGP_CAROLIEiJ_G0016564	Chd3	98	92.015	Mus_caroli
ENSPPYG00000007940	CHD3	98	93.895	ENSMUSG00000018474	Chd3	98	92.332	Mus_musculus
ENSPPYG00000007940	CHD3	98	94.358	MGP_PahariEiJ_G0017695	Chd3	98	92.593	Mus_pahari
ENSPPYG00000007940	CHD3	98	93.895	MGP_SPRETEiJ_G0017400	Chd3	98	92.332	Mus_spretus
ENSPPYG00000007940	CHD3	87	95.216	ENSMPUG00000008861	CHD3	100	95.216	Mustela_putorius_furo
ENSPPYG00000007940	CHD3	100	92.807	ENSMLUG00000014643	-	100	92.807	Myotis_lucifugus
ENSPPYG00000007940	CHD3	98	94.922	ENSNGAG00000000773	Chd3	96	94.922	Nannospalax_galili
ENSPPYG00000007940	CHD3	86	72.754	ENSNBRG00000000636	chd3	97	73.224	Neolamprologus_brichardi
ENSPPYG00000007940	CHD3	99	90.845	ENSNLEG00000009770	CHD3	98	93.224	Nomascus_leucogenys
ENSPPYG00000007940	CHD3	86	91.484	ENSMEUG00000005852	CHD3	87	91.484	Notamacropus_eugenii
ENSPPYG00000007940	CHD3	95	94.177	ENSOPRG00000011069	CHD3	100	94.177	Ochotona_princeps
ENSPPYG00000007940	CHD3	99	93.058	ENSODEG00000017785	CHD3	100	93.058	Octodon_degus
ENSPPYG00000007940	CHD3	96	72.633	ENSONIG00000009292	chd3	99	72.624	Oreochromis_niloticus
ENSPPYG00000007940	CHD3	98	90.867	ENSOCUG00000029299	CHD3	99	90.768	Oryctolagus_cuniculus
ENSPPYG00000007940	CHD3	83	67.713	ENSORLG00000007107	chd3	93	68.135	Oryzias_latipes
ENSPPYG00000007940	CHD3	57	70.936	ENSORLG00020008387	chd3	95	72.261	Oryzias_latipes_hni
ENSPPYG00000007940	CHD3	70	77.033	ENSOMEG00000013691	chd3	99	74.342	Oryzias_melastigma
ENSPPYG00000007940	CHD3	98	95.440	ENSOGAG00000003216	CHD3	98	95.440	Otolemur_garnettii
ENSPPYG00000007940	CHD3	99	90.764	ENSOARG00000017855	CHD3	99	91.013	Ovis_aries
ENSPPYG00000007940	CHD3	100	92.607	ENSPPAG00000032886	CHD3	100	92.607	Pan_paniscus
ENSPPYG00000007940	CHD3	98	95.389	ENSPPRG00000000626	CHD3	99	93.100	Panthera_pardus
ENSPPYG00000007940	CHD3	100	94.950	ENSPTRG00000008714	CHD3	100	94.950	Pan_troglodytes
ENSPPYG00000007940	CHD3	100	94.700	ENSPANG00000023938	CHD3	100	94.700	Papio_anubis
ENSPPYG00000007940	CHD3	95	77.477	ENSPKIG00000006305	chd3	99	77.477	Paramormyrops_kingsleyae
ENSPPYG00000007940	CHD3	55	88.139	ENSPSIG00000010177	CHD3	98	88.412	Pelodiscus_sinensis
ENSPPYG00000007940	CHD3	98	93.941	ENSPEMG00000014262	Chd3	97	93.941	Peromyscus_maniculatus_bairdii
ENSPPYG00000007940	CHD3	98	90.471	ENSPCIG00000005442	CHD3	97	95.935	Phascolarctos_cinereus
ENSPPYG00000007940	CHD3	75	73.774	ENSPFOG00000012464	chd3	91	71.777	Poecilia_formosa
ENSPPYG00000007940	CHD3	87	83.133	ENSPLAG00000002887	chd3	94	83.133	Poecilia_latipinna
ENSPPYG00000007940	CHD3	53	78.580	ENSPMEG00000016725	chd3	91	71.858	Poecilia_mexicana
ENSPPYG00000007940	CHD3	90	81.404	ENSPREG00000011044	chd3	99	75.244	Poecilia_reticulata
ENSPPYG00000007940	CHD3	96	96.393	ENSPCAG00000004350	CHD3	94	96.192	Procavia_capensis
ENSPPYG00000007940	CHD3	98	95.907	ENSPCOG00000020952	CHD3	100	93.694	Propithecus_coquereli
ENSPPYG00000007940	CHD3	82	96.054	ENSPVAG00000016344	CHD3	82	96.054	Pteropus_vampyrus
ENSPPYG00000007940	CHD3	89	77.003	ENSPNAG00000020393	chd3	98	78.388	Pygocentrus_nattereri
ENSPPYG00000007940	CHD3	93	93.627	ENSRNOG00000009722	Chd3	100	93.627	Rattus_norvegicus
ENSPPYG00000007940	CHD3	100	91.646	ENSRBIG00000033562	CHD3	99	93.096	Rhinopithecus_bieti
ENSPPYG00000007940	CHD3	100	93.129	ENSRROG00000029554	CHD3	99	94.459	Rhinopithecus_roxellana
ENSPPYG00000007940	CHD3	100	94.450	ENSSBOG00000020719	CHD3	99	96.175	Saimiri_boliviensis_boliviensis
ENSPPYG00000007940	CHD3	98	90.419	ENSSHAG00000014412	CHD3	98	90.419	Sarcophilus_harrisii
ENSPPYG00000007940	CHD3	88	78.410	ENSSFOG00015023123	chd3	98	72.169	Scleropages_formosus
ENSPPYG00000007940	CHD3	80	91.304	ENSSMAG00000006451	chd3	95	80.729	Scophthalmus_maximus
ENSPPYG00000007940	CHD3	55	70.772	ENSSDUG00000005792	chd3	95	71.691	Seriola_dumerili
ENSPPYG00000007940	CHD3	81	82.967	ENSSPAG00000013694	chd3	97	82.967	Stegastes_partitus
ENSPPYG00000007940	CHD3	98	95.495	ENSSSCG00000021363	CHD3	100	95.638	Sus_scrofa
ENSPPYG00000007940	CHD3	75	73.453	ENSTRUG00000014990	chd3	89	73.650	Takifugu_rubripes
ENSPPYG00000007940	CHD3	98	70.968	ENSTNIG00000012998	chd3	98	70.558	Tetraodon_nigroviridis
ENSPPYG00000007940	CHD3	63	100.000	ENSTBEG00000011454	-	71	100.000	Tupaia_belangeri
ENSPPYG00000007940	CHD3	98	95.501	ENSTTRG00000010295	CHD3	95	95.501	Tursiops_truncatus
ENSPPYG00000007940	CHD3	93	94.502	ENSUAMG00000005475	CHD3	99	94.502	Ursus_americanus
ENSPPYG00000007940	CHD3	56	100.000	ENSVPAG00000010794	-	62	100.000	Vicugna_pacos
ENSPPYG00000007940	CHD3	96	95.578	ENSVVUG00000028011	CHD3	99	95.578	Vulpes_vulpes
ENSPPYG00000007940	CHD3	98	70.061	ENSXETG00000012991	chd3	95	69.822	Xenopus_tropicalis
ENSPPYG00000007940	CHD3	51	80.158	ENSXCOG00000000809	chd3	94	80.383	Xiphophorus_couchianus
ENSPPYG00000007940	CHD3	79	82.967	ENSXMAG00000016035	chd3	99	82.967	Xiphophorus_maculatus