EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPPYG00000008198 (Gene tree)
Gene ID: 100436200
Gene Symbol: RDM1
Alias: MGC33977|RAD52B
Full Name: RAD52 motif containing 1
Gene Type: protein_coding
Species: Pongo_abelii
Status: putative
Strand: Minus strand
Length: 12427 bases
Position: chr17:30704122-30716548
Accession: 100436200
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPPYP00000009215	RRM_1	PF00076.22	1.7e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPPYT00000009588	RDM1-201	1230	XM_002827274	ENSPPYP00000009215	283 (aa)	XP_002827320	H2NTE6

Gene Model

Click here to download ENSPPYG00000008198's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPPYG00000008198's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPPYG00000008198	RDM1	100	96.479	ENSG00000278023	RDM1	100	96.479	Homo_sapiens
ENSPPYG00000008198	RDM1	81	34.348	ENSAPOG00000021886	zgc:103564	84	34.348	Acanthochromis_polyacanthus
ENSPPYG00000008198	RDM1	88	33.068	ENSAPEG00000008929	zgc:103564	92	33.068	Amphiprion_percula
ENSPPYG00000008198	RDM1	86	51.600	ENSAPLG00000004384	RDM1	94	51.600	Anas_platyrhynchos
ENSPPYG00000008198	RDM1	97	48.399	ENSACAG00000012989	-	100	48.399	Anolis_carolinensis
ENSPPYG00000008198	RDM1	100	91.901	ENSANAG00000032752	RDM1	100	93.284	Aotus_nancymaae
ENSPPYG00000008198	RDM1	100	78.596	ENSBTAG00000000030	RDM1	100	78.596	Bos_taurus
ENSPPYG00000008198	RDM1	89	91.270	ENSCJAG00000015031	RDM1	99	91.928	Callithrix_jacchus
ENSPPYG00000008198	RDM1	88	75.000	ENSCAFG00000015160	-	100	75.000	Canis_familiaris
ENSPPYG00000008198	RDM1	99	78.723	ENSCHIG00000020607	RDM1	100	78.723	Capra_hircus
ENSPPYG00000008198	RDM1	100	69.014	ENSCPOG00000001495	-	99	69.014	Cavia_porcellus
ENSPPYG00000008198	RDM1	96	90.074	ENSCCAG00000035763	RDM1	100	92.537	Cebus_capucinus
ENSPPYG00000008198	RDM1	100	95.423	ENSCATG00000044451	RDM1	100	95.556	Cercocebus_atys
ENSPPYG00000008198	RDM1	94	89.850	ENSCSAG00000006209	RDM1	100	89.850	Chlorocebus_sabaeus
ENSPPYG00000008198	RDM1	78	56.306	ENSCPBG00000009105	RDM1	93	54.694	Chrysemys_picta_bellii
ENSPPYG00000008198	RDM1	100	94.366	ENSCANG00000041322	RDM1	100	94.366	Colobus_angolensis_palliatus
ENSPPYG00000008198	RDM1	96	72.794	ENSCGRG00001015927	Rdm1	99	72.792	Cricetulus_griseus_chok1gshd
ENSPPYG00000008198	RDM1	88	34.127	ENSCVAG00000001956	zgc:103564	96	34.457	Cyprinodon_variegatus
ENSPPYG00000008198	RDM1	89	80.632	ENSDNOG00000045224	-	94	80.632	Dasypus_novemcinctus
ENSPPYG00000008198	RDM1	67	81.443	ENSEASG00005010554	RDM1	69	81.443	Equus_asinus_asinus
ENSPPYG00000008198	RDM1	89	81.569	ENSECAG00000022182	RDM1	91	81.569	Equus_caballus
ENSPPYG00000008198	RDM1	89	73.705	ENSEEUG00000006127	RDM1	100	73.705	Erinaceus_europaeus
ENSPPYG00000008198	RDM1	80	83.700	ENSFCAG00000043429	RDM1	96	87.218	Felis_catus
ENSPPYG00000008198	RDM1	97	52.500	ENSGALG00000000243	RDM1	97	52.500	Gallus_gallus
ENSPPYG00000008198	RDM1	81	53.448	ENSGAGG00000000293	-	78	53.815	Gopherus_agassizii
ENSPPYG00000008198	RDM1	100	97.183	ENSGGOG00000010584	RDM1	100	97.183	Gorilla_gorilla
ENSPPYG00000008198	RDM1	88	35.600	ENSHCOG00000002518	-	89	35.600	Hippocampus_comes
ENSPPYG00000008198	RDM1	100	82.394	ENSSTOG00000022491	RDM1	100	82.394	Ictidomys_tridecemlineatus
ENSPPYG00000008198	RDM1	100	78.596	ENSLAFG00000029300	RDM1	100	78.596	Loxodonta_africana
ENSPPYG00000008198	RDM1	100	95.070	ENSMFAG00000032968	RDM1	100	95.556	Macaca_fascicularis
ENSPPYG00000008198	RDM1	100	95.423	ENSMMUG00000006847	RDM1	100	95.556	Macaca_mulatta
ENSPPYG00000008198	RDM1	100	95.070	ENSMNEG00000039977	RDM1	100	95.556	Macaca_nemestrina
ENSPPYG00000008198	RDM1	100	94.718	ENSMLEG00000041158	RDM1	100	95.556	Mandrillus_leucophaeus
ENSPPYG00000008198	RDM1	91	50.965	ENSMGAG00000008774	RDM1	96	54.286	Meleagris_gallopavo
ENSPPYG00000008198	RDM1	99	72.792	ENSMAUG00000018559	Rdm1	99	72.792	Mesocricetus_auratus
ENSPPYG00000008198	RDM1	100	86.219	ENSMICG00000038651	RDM1	100	90.580	Microcebus_murinus
ENSPPYG00000008198	RDM1	97	68.478	ENSMOCG00000015095	Rdm1	99	68.478	Microtus_ochrogaster
ENSPPYG00000008198	RDM1	97	64.000	ENSMODG00000011101	RDM1	100	64.000	Monodelphis_domestica
ENSPPYG00000008198	RDM1	99	72.085	MGP_CAROLIEiJ_G0017226	Rdm1	99	72.085	Mus_caroli
ENSPPYG00000008198	RDM1	99	72.143	ENSMUSG00000010362	Rdm1	99	72.143	Mus_musculus
ENSPPYG00000008198	RDM1	99	72.183	MGP_PahariEiJ_G0018356	Rdm1	99	72.183	Mus_pahari
ENSPPYG00000008198	RDM1	99	71.731	MGP_SPRETEiJ_G0018069	Rdm1	99	71.731	Mus_spretus
ENSPPYG00000008198	RDM1	100	80.769	ENSMPUG00000008363	RDM1	100	80.769	Mustela_putorius_furo
ENSPPYG00000008198	RDM1	100	96.831	ENSNLEG00000014173	RDM1	100	96.831	Nomascus_leucogenys
ENSPPYG00000008198	RDM1	88	66.000	ENSMEUG00000015826	RDM1	100	66.000	Notamacropus_eugenii
ENSPPYG00000008198	RDM1	89	77.778	ENSOCUG00000022704	RDM1	97	77.778	Oryctolagus_cuniculus
ENSPPYG00000008198	RDM1	100	82.394	ENSOGAG00000011332	RDM1	100	82.394	Otolemur_garnettii
ENSPPYG00000008198	RDM1	100	97.535	ENSPPAG00000029969	RDM1	100	97.535	Pan_paniscus
ENSPPYG00000008198	RDM1	100	97.887	ENSPTRG00000009031	RDM1	100	97.887	Pan_troglodytes
ENSPPYG00000008198	RDM1	100	95.070	ENSPANG00000022933	RDM1	100	95.070	Papio_anubis
ENSPPYG00000008198	RDM1	96	72.426	ENSPEMG00000018985	Rdm1	99	72.183	Peromyscus_maniculatus_bairdii
ENSPPYG00000008198	RDM1	100	82.746	ENSPCOG00000017995	RDM1	100	85.507	Propithecus_coquereli
ENSPPYG00000008198	RDM1	88	82.869	ENSPVAG00000001116	RDM1	100	82.869	Pteropus_vampyrus
ENSPPYG00000008198	RDM1	99	71.786	ENSRNOG00000020751	Rdm1	99	71.786	Rattus_norvegicus
ENSPPYG00000008198	RDM1	100	95.070	ENSRBIG00000030000	RDM1	100	95.070	Rhinopithecus_bieti
ENSPPYG00000008198	RDM1	100	95.070	ENSRROG00000035242	RDM1	100	95.070	Rhinopithecus_roxellana
ENSPPYG00000008198	RDM1	97	66.909	ENSSHAG00000013584	RDM1	100	66.909	Sarcophilus_harrisii
ENSPPYG00000008198	RDM1	92	52.830	ENSSPUG00000010941	RDM1	94	52.830	Sphenodon_punctatus
ENSPPYG00000008198	RDM1	93	35.985	ENSSPAG00000011690	-	95	35.985	Stegastes_partitus
ENSPPYG00000008198	RDM1	79	71.429	ENSSSCG00000017574	-	93	71.429	Sus_scrofa
ENSPPYG00000008198	RDM1	89	63.347	ENSTBEG00000010030	RDM1	99	63.347	Tupaia_belangeri
ENSPPYG00000008198	RDM1	100	82.394	ENSUAMG00000027279	RDM1	100	82.394	Ursus_americanus
ENSPPYG00000008198	RDM1	100	82.394	ENSUMAG00000015423	RDM1	98	82.394	Ursus_maritimus