EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPPYG00000008244 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Pongo_abelii
Status: putative
Strand: Minus strand
Length: 431344 bases
Position: chr17:34479591-34910934
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPPYP00000009262	RRM_1	PF00076.22	5.6e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPPYT00000009636	-	742	-	ENSPPYP00000009262	236 (aa)	-	H2NTJ2

Gene Model

Click here to download ENSPPYG00000008244's gene model file

Pathways

Pathway ID	Pathway Name	Source
pon03015	mRNA surveillance pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPPYG00000008244's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPPYG00000008244	-	60	35.922	ENSPPYG00000001012	-	62	35.833
ENSPPYG00000008244	-	100	67.033	ENSPPYG00000005027	MSI1	94	65.201

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPPYG00000008244	-	100	96.639	ENSG00000153944	MSI2	94	96.639	Homo_sapiens
ENSPPYG00000008244	-	100	89.916	ENSAPOG00000001658	msi2a	93	89.916	Acanthochromis_polyacanthus
ENSPPYG00000008244	-	100	89.844	ENSAMEG00000002697	MSI2	99	89.844	Ailuropoda_melanoleuca
ENSPPYG00000008244	-	100	62.914	ENSACIG00000009475	msi2a	94	63.245	Amphilophus_citrinellus
ENSPPYG00000008244	-	100	89.916	ENSAPEG00000007706	msi2a	93	89.916	Amphiprion_percula
ENSPPYG00000008244	-	100	89.916	ENSATEG00000010498	msi2a	93	89.916	Anabas_testudineus
ENSPPYG00000008244	-	100	90.336	ENSATEG00000003301	-	100	90.336	Anabas_testudineus
ENSPPYG00000008244	-	94	92.857	ENSACAG00000005452	MSI2	67	95.455	Anolis_carolinensis
ENSPPYG00000008244	-	100	96.639	ENSANAG00000037827	MSI2	94	96.639	Aotus_nancymaae
ENSPPYG00000008244	-	100	89.496	ENSACLG00000007752	msi2a	93	89.496	Astatotilapia_calliptera
ENSPPYG00000008244	-	100	91.213	ENSAMXG00000032796	msi2a	94	88.703	Astyanax_mexicanus
ENSPPYG00000008244	-	100	92.017	ENSAMXG00000010474	msi2b	97	92.017	Astyanax_mexicanus
ENSPPYG00000008244	-	100	96.218	ENSBTAG00000004406	MSI2	97	96.218	Bos_taurus
ENSPPYG00000008244	-	60	52.830	WBGene00003423	msi-1	71	52.830	Caenorhabditis_elegans
ENSPPYG00000008244	-	100	96.639	ENSCJAG00000013998	MSI2	94	96.639	Callithrix_jacchus
ENSPPYG00000008244	-	100	89.844	ENSCAFG00020025620	MSI2	81	89.844	Canis_lupus_dingo
ENSPPYG00000008244	-	100	96.218	ENSCHIG00000016580	MSI2	94	96.218	Capra_hircus
ENSPPYG00000008244	-	100	96.639	ENSCPOG00000034042	MSI2	84	96.639	Cavia_porcellus
ENSPPYG00000008244	-	100	96.639	ENSCCAG00000033927	MSI2	94	96.639	Cebus_capucinus
ENSPPYG00000008244	-	100	96.639	ENSCATG00000040879	MSI2	94	96.639	Cercocebus_atys
ENSPPYG00000008244	-	100	89.844	ENSCLAG00000014325	MSI2	94	89.844	Chinchilla_lanigera
ENSPPYG00000008244	-	100	96.639	ENSCSAG00000005633	MSI2	94	96.639	Chlorocebus_sabaeus
ENSPPYG00000008244	-	94	68.000	ENSCHOG00000008660	MSI2	80	68.000	Choloepus_hoffmanni
ENSPPYG00000008244	-	100	94.828	ENSCPBG00000009942	MSI2	76	96.970	Chrysemys_picta_bellii
ENSPPYG00000008244	-	85	51.220	ENSCING00000018579	-	97	49.776	Ciona_intestinalis
ENSPPYG00000008244	-	59	65.972	ENSCSAVG00000010397	-	71	64.238	Ciona_savignyi
ENSPPYG00000008244	-	94	96.000	ENSCANG00000036414	MSI2	100	89.844	Colobus_angolensis_palliatus
ENSPPYG00000008244	-	100	96.234	ENSCGRG00001013330	Msi2	94	96.234	Cricetulus_griseus_chok1gshd
ENSPPYG00000008244	-	100	89.494	ENSCGRG00000003141	Msi2	100	89.494	Cricetulus_griseus_crigri
ENSPPYG00000008244	-	81	71.134	ENSCSEG00000013557	msi2a	83	69.588	Cynoglossus_semilaevis
ENSPPYG00000008244	-	100	79.832	ENSCSEG00000003266	-	91	79.832	Cynoglossus_semilaevis
ENSPPYG00000008244	-	94	88.889	ENSCVAG00000017075	msi2a	92	89.286	Cyprinodon_variegatus
ENSPPYG00000008244	-	89	90.654	ENSDARG00000032614	msi2b	100	100.000	Danio_rerio
ENSPPYG00000008244	-	100	70.470	ENSDARG00000033901	msi2a	95	70.470	Danio_rerio
ENSPPYG00000008244	-	100	96.639	ENSDNOG00000014501	MSI2	100	96.639	Dasypus_novemcinctus
ENSPPYG00000008244	-	81	84.772	ENSDORG00000005394	Msi2	84	83.756	Dipodomys_ordii
ENSPPYG00000008244	-	100	50.000	FBgn0260943	Rbp6	88	62.238	Drosophila_melanogaster
ENSPPYG00000008244	-	64	74.342	ENSETEG00000012450	-	64	74.342	Echinops_telfairi
ENSPPYG00000008244	-	98	58.824	ENSEBUG00000006732	msi2a	86	56.863	Eptatretus_burgeri
ENSPPYG00000008244	-	100	93.089	ENSEASG00005002965	MSI2	97	81.495	Equus_asinus_asinus
ENSPPYG00000008244	-	97	95.217	ENSECAG00000011435	MSI2	87	95.217	Equus_caballus
ENSPPYG00000008244	-	94	80.000	ENSEEUG00000007810	MSI2	89	80.000	Erinaceus_europaeus
ENSPPYG00000008244	-	100	83.784	ENSELUG00000001361	msi2b	93	83.784	Esox_lucius
ENSPPYG00000008244	-	100	90.756	ENSELUG00000011747	msi2a	93	90.756	Esox_lucius
ENSPPYG00000008244	-	100	96.639	ENSFCAG00000041686	MSI2	94	96.639	Felis_catus
ENSPPYG00000008244	-	100	89.844	ENSFDAG00000016118	MSI2	100	89.844	Fukomys_damarensis
ENSPPYG00000008244	-	100	89.496	ENSFHEG00000000084	msi2a	93	89.496	Fundulus_heteroclitus
ENSPPYG00000008244	-	100	88.672	ENSGALG00000005567	MSI2	94	88.672	Gallus_gallus
ENSPPYG00000008244	-	94	78.947	ENSGAFG00000006974	msi2a	78	98.361	Gambusia_affinis
ENSPPYG00000008244	-	100	94.828	ENSGAGG00000016542	MSI2	87	85.985	Gopherus_agassizii
ENSPPYG00000008244	-	94	96.000	ENSGGOG00000013182	MSI2	100	89.844	Gorilla_gorilla
ENSPPYG00000008244	-	100	89.496	ENSHBUG00000020800	msi2a	93	89.496	Haplochromis_burtoni
ENSPPYG00000008244	-	100	77.734	ENSHGLG00000012444	MSI2	93	77.734	Heterocephalus_glaber_female
ENSPPYG00000008244	-	79	87.440	ENSHGLG00100003744	MSI2	100	87.440	Heterocephalus_glaber_male
ENSPPYG00000008244	-	96	89.441	ENSHCOG00000000266	msi2a	91	79.839	Hippocampus_comes
ENSPPYG00000008244	-	93	83.333	ENSHCOG00000017241	-	65	84.416	Hippocampus_comes
ENSPPYG00000008244	-	94	91.556	ENSIPUG00000003732	msi2b	93	91.518	Ictalurus_punctatus
ENSPPYG00000008244	-	100	90.756	ENSIPUG00000021097	msi2a	93	89.076	Ictalurus_punctatus
ENSPPYG00000008244	-	100	96.639	ENSSTOG00000007884	MSI2	84	96.639	Ictidomys_tridecemlineatus
ENSPPYG00000008244	-	79	81.910	ENSJJAG00000006292	-	100	81.407	Jaculus_jaculus
ENSPPYG00000008244	-	94	88.000	ENSKMAG00000009494	msi2a	89	88.393	Kryptolebias_marmoratus
ENSPPYG00000008244	-	100	60.133	ENSLBEG00000026223	-	88	60.133	Labrus_bergylta
ENSPPYG00000008244	-	100	89.916	ENSLBEG00000007061	msi2a	93	89.916	Labrus_bergylta
ENSPPYG00000008244	-	100	72.727	ENSLOCG00000004675	msi2b	95	72.727	Lepisosteus_oculatus
ENSPPYG00000008244	-	94	96.000	ENSMFAG00000003775	MSI2	100	89.844	Macaca_fascicularis
ENSPPYG00000008244	-	94	96.000	ENSMMUG00000002069	MSI2	100	89.844	Macaca_mulatta
ENSPPYG00000008244	-	100	96.639	ENSMNEG00000045275	MSI2	94	96.639	Macaca_nemestrina
ENSPPYG00000008244	-	94	96.000	ENSMLEG00000033888	MSI2	100	89.844	Mandrillus_leucophaeus
ENSPPYG00000008244	-	100	86.555	ENSMAMG00000002488	-	85	98.361	Mastacembelus_armatus
ENSPPYG00000008244	-	100	89.121	ENSMAMG00000010503	msi2a	93	87.029	Mastacembelus_armatus
ENSPPYG00000008244	-	100	89.496	ENSMZEG00005007676	msi2a	94	89.496	Maylandia_zebra
ENSPPYG00000008244	-	100	89.494	ENSMAUG00000003862	Msi2	94	89.494	Mesocricetus_auratus
ENSPPYG00000008244	-	100	96.639	ENSMICG00000013598	-	94	96.639	Microcebus_murinus
ENSPPYG00000008244	-	100	72.428	ENSMICG00000032913	-	93	73.663	Microcebus_murinus
ENSPPYG00000008244	-	100	89.844	ENSMOCG00000005820	Msi2	94	89.844	Microtus_ochrogaster
ENSPPYG00000008244	-	94	79.111	ENSMMOG00000008348	msi2a	76	98.387	Mola_mola
ENSPPYG00000008244	-	79	85.990	ENSMODG00000014790	MSI2	100	85.990	Monodelphis_domestica
ENSPPYG00000008244	-	100	85.714	ENSMALG00000000071	msi2a	93	96.825	Monopterus_albus
ENSPPYG00000008244	-	100	96.639	MGP_CAROLIEiJ_G0016948	Msi2	100	100.000	Mus_caroli
ENSPPYG00000008244	-	100	96.639	ENSMUSG00000069769	Msi2	100	100.000	Mus_musculus
ENSPPYG00000008244	-	100	96.639	MGP_PahariEiJ_G0018079	Msi2	100	100.000	Mus_pahari
ENSPPYG00000008244	-	100	96.639	MGP_SPRETEiJ_G0017795	Msi2	100	100.000	Mus_spretus
ENSPPYG00000008244	-	100	96.639	ENSMPUG00000015377	MSI2	97	96.639	Mustela_putorius_furo
ENSPPYG00000008244	-	100	96.639	ENSMLUG00000007865	MSI2	97	96.639	Myotis_lucifugus
ENSPPYG00000008244	-	100	89.844	ENSNGAG00000017807	Msi2	94	89.844	Nannospalax_galili
ENSPPYG00000008244	-	100	89.496	ENSNBRG00000014596	msi2a	93	89.496	Neolamprologus_brichardi
ENSPPYG00000008244	-	94	96.000	ENSNLEG00000008059	MSI2	100	89.844	Nomascus_leucogenys
ENSPPYG00000008244	-	64	87.417	ENSOPRG00000000872	-	64	87.417	Ochotona_princeps
ENSPPYG00000008244	-	100	89.844	ENSODEG00000011974	MSI2	94	89.844	Octodon_degus
ENSPPYG00000008244	-	92	94.156	ENSOANG00000005667	MSI2	70	94.156	Ornithorhynchus_anatinus
ENSPPYG00000008244	-	100	96.639	ENSOCUG00000010440	MSI2	97	96.639	Oryctolagus_cuniculus
ENSPPYG00000008244	-	100	89.916	ENSORLG00000009671	msi2a	94	89.916	Oryzias_latipes
ENSPPYG00000008244	-	100	89.916	ENSORLG00020021556	msi2a	94	89.916	Oryzias_latipes_hni
ENSPPYG00000008244	-	100	89.916	ENSORLG00015004592	msi2a	94	89.916	Oryzias_latipes_hsok
ENSPPYG00000008244	-	100	89.916	ENSOMEG00000000146	msi2a	99	89.916	Oryzias_melastigma
ENSPPYG00000008244	-	100	90.756	ENSOGAG00000005621	MSI2	99	90.756	Otolemur_garnettii
ENSPPYG00000008244	-	100	89.844	ENSPPAG00000037697	MSI2	100	89.844	Pan_paniscus
ENSPPYG00000008244	-	100	96.639	ENSPPRG00000001848	MSI2	94	96.639	Panthera_pardus
ENSPPYG00000008244	-	100	89.844	ENSPTIG00000021678	MSI2	96	89.844	Panthera_tigris_altaica
ENSPPYG00000008244	-	64	84.416	ENSPTIG00000021873	-	63	84.416	Panthera_tigris_altaica
ENSPPYG00000008244	-	94	96.000	ENSPTRG00000009437	MSI2	100	89.844	Pan_troglodytes
ENSPPYG00000008244	-	100	96.639	ENSPANG00000022319	MSI2	94	96.639	Papio_anubis
ENSPPYG00000008244	-	94	85.778	ENSPKIG00000007038	-	97	74.359	Paramormyrops_kingsleyae
ENSPPYG00000008244	-	100	94.828	ENSPSIG00000008618	MSI2	76	96.970	Pelodiscus_sinensis
ENSPPYG00000008244	-	100	89.076	ENSPMGG00000005888	msi2a	93	89.076	Periophthalmus_magnuspinnatus
ENSPPYG00000008244	-	100	88.672	ENSPCIG00000006063	MSI2	94	85.606	Phascolarctos_cinereus
ENSPPYG00000008244	-	99	86.555	ENSPREG00000000881	msi2a	92	86.555	Poecilia_reticulata
ENSPPYG00000008244	-	100	70.588	ENSPCAG00000010552	MSI2	100	70.588	Procavia_capensis
ENSPPYG00000008244	-	100	85.294	ENSPVAG00000017053	MSI2	99	85.294	Pteropus_vampyrus
ENSPPYG00000008244	-	100	89.496	ENSPNYG00000018393	msi2a	94	89.496	Pundamilia_nyererei
ENSPPYG00000008244	-	100	91.632	ENSPNAG00000014957	msi2a	94	89.540	Pygocentrus_nattereri
ENSPPYG00000008244	-	100	91.213	ENSPNAG00000000844	msi2b	93	89.121	Pygocentrus_nattereri
ENSPPYG00000008244	-	100	96.639	ENSRNOG00000025338	Msi2	86	96.639	Rattus_norvegicus
ENSPPYG00000008244	-	94	96.429	ENSSBOG00000026425	MSI2	100	89.844	Saimiri_boliviensis_boliviensis
ENSPPYG00000008244	-	100	88.672	ENSSHAG00000008672	MSI2	100	88.672	Sarcophilus_harrisii
ENSPPYG00000008244	-	94	85.621	ENSSFOG00015012168	msi2b	56	85.621	Scleropages_formosus
ENSPPYG00000008244	-	100	86.555	ENSSFOG00015021687	-	97	84.454	Scleropages_formosus
ENSPPYG00000008244	-	100	89.916	ENSSMAG00000018484	msi2a	93	89.916	Scophthalmus_maximus
ENSPPYG00000008244	-	100	89.916	ENSSDUG00000014507	msi2a	93	89.916	Seriola_dumerili
ENSPPYG00000008244	-	100	84.274	ENSSDUG00000021968	-	86	96.721	Seriola_dumerili
ENSPPYG00000008244	-	100	89.916	ENSSLDG00000017172	msi2a	93	89.916	Seriola_lalandi_dorsalis
ENSPPYG00000008244	-	96	89.441	ENSSPAG00000017793	msi2a	88	81.933	Stegastes_partitus
ENSPPYG00000008244	-	100	96.639	ENSSSCG00000038505	MSI2	94	96.639	Sus_scrofa
ENSPPYG00000008244	-	79	86.473	ENSTGUG00000008452	MSI2	100	86.473	Taeniopygia_guttata
ENSPPYG00000008244	-	100	89.076	ENSTRUG00000021248	msi2a	88	89.076	Takifugu_rubripes
ENSPPYG00000008244	-	100	87.395	ENSTTRG00000002189	MSI2	100	87.395	Tursiops_truncatus
ENSPPYG00000008244	-	100	96.639	ENSUAMG00000000700	MSI2	97	96.639	Ursus_americanus
ENSPPYG00000008244	-	94	87.111	ENSUMAG00000000505	MSI2	79	87.111	Ursus_maritimus
ENSPPYG00000008244	-	53	71.654	ENSVPAG00000006837	-	62	71.654	Vicugna_pacos
ENSPPYG00000008244	-	100	96.639	ENSVVUG00000011783	MSI2	94	89.844	Vulpes_vulpes
ENSPPYG00000008244	-	94	87.500	ENSXCOG00000006113	msi2a	83	87.500	Xiphophorus_couchianus
ENSPPYG00000008244	-	96	89.441	ENSXMAG00000000608	msi2a	92	89.286	Xiphophorus_maculatus