EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPPYG00000008398 (Gene tree)
Gene ID: 100174605
Gene Symbol: RAB5C
Alias: -
Full Name: Pongo abelii RAB5C%2C member RAS oncogene family (RAB5C)%2C mRNA.
Gene Type: protein_coding
Species: Pongo_abelii
Status: putative
Strand: Plus strand
Length: 30356 bases
Position: chr17:47291903-47322258
Accession: NM_001134057
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPPYP00000009444	MMR_HSR1	PF01926.23	9.6e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPPYT00000009823	-	1693	-	ENSPPYP00000009444	216 (aa)	XP_024090062	Q5R7L7

Gene Model

Click here to download ENSPPYG00000008398's gene model file

Pathways

Pathway ID	Pathway Name	Source
pon04014	Ras signaling pathway	KEGG
pon04144	Endocytosis	KEGG
pon04145	Phagosome	KEGG
pon04962	Vasopressin-regulated water reabsorption	KEGG
pon05146	Amoebiasis	KEGG
pon05152	Tuberculosis	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPPYG00000008398's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPPYG00000008398	RAB5C	93	38.164	ENSPPYG00000015072	RAB33B	89	38.164
ENSPPYG00000008398	RAB5C	83	39.459	ENSPPYG00000003733	RAB30	91	39.459
ENSPPYG00000008398	RAB5C	69	41.060	ENSPPYG00000008601	-	77	41.060
ENSPPYG00000008398	RAB5C	80	35.838	ENSPPYG00000016739	RAB23	73	35.838
ENSPPYG00000008398	RAB5C	89	41.463	ENSPPYG00000000730	RAB25	93	41.463
ENSPPYG00000008398	RAB5C	55	31.148	ENSPPYG00000000352	ARL8A	62	31.148
ENSPPYG00000008398	RAB5C	77	42.442	ENSPPYG00000013431	RAB7A	83	42.442
ENSPPYG00000008398	RAB5C	77	32.934	ENSPPYG00000004369	KRAS	90	32.164
ENSPPYG00000008398	RAB5C	73	30.818	ENSPPYG00000008107	-	61	30.818
ENSPPYG00000008398	RAB5C	100	87.500	ENSPPYG00000014074	RAB5A	100	87.500
ENSPPYG00000008398	RAB5C	75	36.585	ENSPPYG00000020901	RAB39B	77	36.585
ENSPPYG00000008398	RAB5C	89	43.590	ENSPPYG00000012360	RAB1A	95	43.590
ENSPPYG00000008398	RAB5C	75	31.902	ENSPPYG00000000997	NRAS	85	31.902
ENSPPYG00000008398	RAB5C	75	40.361	ENSPPYG00000020713	RAB33A	70	40.361
ENSPPYG00000008398	RAB5C	94	41.379	ENSPPYG00000014116	RAB6B	98	41.379
ENSPPYG00000008398	RAB5C	77	43.713	ENSPPYG00000005597	RAB2B	77	43.713
ENSPPYG00000008398	RAB5C	90	47.938	ENSPPYG00000011171	RAB22A	98	47.938
ENSPPYG00000008398	RAB5C	89	37.436	ENSPPYG00000005021	RAB35	96	37.436
ENSPPYG00000008398	RAB5C	75	44.720	ENSPPYG00000018617	RAB2A	76	44.720
ENSPPYG00000008398	RAB5C	55	31.967	ENSPPYG00000013694	ARL8B	62	31.967
ENSPPYG00000008398	RAB5C	53	39.130	ENSPPYG00000012000	-	50	39.130
ENSPPYG00000008398	RAB5C	90	41.748	ENSPPYG00000006573	RAB11A	94	41.748
ENSPPYG00000008398	RAB5C	85	41.799	ENSPPYG00000002172	RAB18	93	40.404
ENSPPYG00000008398	RAB5C	71	33.540	ENSPPYG00000016550	-	99	33.540
ENSPPYG00000008398	RAB5C	89	37.500	ENSPPYG00000000790	-	95	37.500
ENSPPYG00000008398	RAB5C	77	33.333	ENSPPYG00000004331	RERG	84	33.333
ENSPPYG00000008398	RAB5C	94	40.097	ENSPPYG00000003663	RAB6A	98	40.097
ENSPPYG00000008398	RAB5C	81	33.702	ENSPPYG00000002868	HRAS	94	33.702
ENSPPYG00000008398	RAB5C	90	42.512	ENSPPYG00000009504	RAB11B	94	42.512
ENSPPYG00000008398	RAB5C	89	34.848	ENSPPYG00000020591	RAB9B	97	34.848

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPPYG00000008398	RAB5C	100	100.000	ENSG00000108774	RAB5C	100	100.000	Homo_sapiens
ENSPPYG00000008398	RAB5C	99	89.302	ENSAPOG00000016864	rab5c	98	91.163	Acanthochromis_polyacanthus
ENSPPYG00000008398	RAB5C	100	99.074	ENSAMEG00000006003	RAB5C	100	99.074	Ailuropoda_melanoleuca
ENSPPYG00000008398	RAB5C	99	88.889	ENSACIG00000010896	rab5c	98	90.278	Amphilophus_citrinellus
ENSPPYG00000008398	RAB5C	99	89.352	ENSAOCG00000016614	rab5c	98	91.204	Amphiprion_ocellaris
ENSPPYG00000008398	RAB5C	97	89.100	ENSAPEG00000017868	-	97	90.995	Amphiprion_percula
ENSPPYG00000008398	RAB5C	100	89.450	ENSATEG00000001937	rab5c	100	90.826	Anabas_testudineus
ENSPPYG00000008398	RAB5C	94	99.020	ENSANAG00000025390	RAB5C	100	99.020	Aotus_nancymaae
ENSPPYG00000008398	RAB5C	96	89.100	ENSACLG00000008615	-	99	88.584	Astatotilapia_calliptera
ENSPPYG00000008398	RAB5C	99	87.963	ENSACLG00000002706	rab5c	98	90.278	Astatotilapia_calliptera
ENSPPYG00000008398	RAB5C	96	88.571	ENSAMXG00000037267	-	99	90.952	Astyanax_mexicanus
ENSPPYG00000008398	RAB5C	99	89.862	ENSAMXG00000043717	rab5c	98	91.244	Astyanax_mexicanus
ENSPPYG00000008398	RAB5C	100	99.074	ENSBTAG00000006982	RAB5C	100	99.074	Bos_taurus
ENSPPYG00000008398	RAB5C	99	75.814	WBGene00004268	rab-5	99	75.814	Caenorhabditis_elegans
ENSPPYG00000008398	RAB5C	100	98.611	ENSCAFG00000015629	RAB5C	100	98.611	Canis_familiaris
ENSPPYG00000008398	RAB5C	100	98.611	ENSCAFG00020013537	RAB5C	100	98.611	Canis_lupus_dingo
ENSPPYG00000008398	RAB5C	100	99.074	ENSCHIG00000012960	RAB5C	100	99.074	Capra_hircus
ENSPPYG00000008398	RAB5C	100	99.537	ENSTSYG00000030531	RAB5C	100	99.537	Carlito_syrichta
ENSPPYG00000008398	RAB5C	100	98.611	ENSCCAG00000025940	RAB5C	100	98.611	Cebus_capucinus
ENSPPYG00000008398	RAB5C	100	100.000	ENSCATG00000040873	RAB5C	100	100.000	Cercocebus_atys
ENSPPYG00000008398	RAB5C	100	97.222	ENSCLAG00000016650	RAB5C	100	97.222	Chinchilla_lanigera
ENSPPYG00000008398	RAB5C	82	99.438	ENSCHOG00000009886	RAB5C	100	99.438	Choloepus_hoffmanni
ENSPPYG00000008398	RAB5C	99	76.168	ENSCING00000003340	-	99	76.168	Ciona_intestinalis
ENSPPYG00000008398	RAB5C	99	75.000	ENSCSAVG00000000613	-	99	83.333	Ciona_savignyi
ENSPPYG00000008398	RAB5C	100	99.074	ENSCGRG00001014226	Rab5c	100	99.074	Cricetulus_griseus_chok1gshd
ENSPPYG00000008398	RAB5C	100	99.074	ENSCGRG00000007534	Rab5c	100	99.074	Cricetulus_griseus_crigri
ENSPPYG00000008398	RAB5C	99	90.741	ENSCSEG00000017024	rab5c	98	90.741	Cynoglossus_semilaevis
ENSPPYG00000008398	RAB5C	99	89.352	ENSCVAG00000009550	rab5c	98	90.741	Cyprinodon_variegatus
ENSPPYG00000008398	RAB5C	100	98.611	ENSDNOG00000038853	RAB5C	100	98.611	Dasypus_novemcinctus
ENSPPYG00000008398	RAB5C	100	98.611	ENSDORG00000006819	Rab5c	100	98.611	Dipodomys_ordii
ENSPPYG00000008398	RAB5C	99	74.648	FBgn0014010	Rab5	95	74.648	Drosophila_melanogaster
ENSPPYG00000008398	RAB5C	99	79.535	ENSEBUG00000014794	rab5c	100	79.535	Eptatretus_burgeri
ENSPPYG00000008398	RAB5C	100	99.074	ENSEASG00005009281	RAB5C	100	99.074	Equus_asinus_asinus
ENSPPYG00000008398	RAB5C	100	99.537	ENSECAG00000025054	RAB5C	100	99.537	Equus_caballus
ENSPPYG00000008398	RAB5C	100	99.074	ENSEEUG00000002790	RAB5C	100	99.074	Erinaceus_europaeus
ENSPPYG00000008398	RAB5C	99	88.426	ENSELUG00000010439	-	98	88.426	Esox_lucius
ENSPPYG00000008398	RAB5C	99	87.963	ENSELUG00000018516	rab5c	99	89.815	Esox_lucius
ENSPPYG00000008398	RAB5C	100	99.074	ENSFCAG00000002148	RAB5C	100	99.074	Felis_catus
ENSPPYG00000008398	RAB5C	100	95.370	ENSFDAG00000021541	RAB5C	100	95.370	Fukomys_damarensis
ENSPPYG00000008398	RAB5C	99	90.783	ENSFHEG00000015268	-	99	90.783	Fundulus_heteroclitus
ENSPPYG00000008398	RAB5C	99	89.352	ENSFHEG00000012117	rab5c	98	90.741	Fundulus_heteroclitus
ENSPPYG00000008398	RAB5C	80	87.209	ENSGMOG00000001876	-	99	87.209	Gadus_morhua
ENSPPYG00000008398	RAB5C	99	87.963	ENSGMOG00000015096	rab5c	98	90.278	Gadus_morhua
ENSPPYG00000008398	RAB5C	96	90.952	ENSGAFG00000003642	-	99	88.182	Gambusia_affinis
ENSPPYG00000008398	RAB5C	99	89.815	ENSGAFG00000000884	rab5c	98	91.204	Gambusia_affinis
ENSPPYG00000008398	RAB5C	87	94.681	ENSGACG00000008659	rab5c	98	86.574	Gasterosteus_aculeatus
ENSPPYG00000008398	RAB5C	100	100.000	ENSGGOG00000005472	RAB5C	100	100.000	Gorilla_gorilla
ENSPPYG00000008398	RAB5C	96	89.100	ENSHBUG00000006823	-	99	88.584	Haplochromis_burtoni
ENSPPYG00000008398	RAB5C	99	87.963	ENSHBUG00000002014	rab5c	98	90.278	Haplochromis_burtoni
ENSPPYG00000008398	RAB5C	100	94.907	ENSHGLG00000012067	RAB5C	100	94.907	Heterocephalus_glaber_female
ENSPPYG00000008398	RAB5C	97	82.075	ENSHCOG00000020238	-	100	80.455	Hippocampus_comes
ENSPPYG00000008398	RAB5C	99	89.862	ENSHCOG00000004662	rab5c	97	90.783	Hippocampus_comes
ENSPPYG00000008398	RAB5C	96	87.619	ENSIPUG00000020082	rab5c	98	88.532	Ictalurus_punctatus
ENSPPYG00000008398	RAB5C	100	97.685	ENSSTOG00000006620	RAB5C	100	97.685	Ictidomys_tridecemlineatus
ENSPPYG00000008398	RAB5C	100	99.074	ENSJJAG00000021181	Rab5c	100	99.074	Jaculus_jaculus
ENSPPYG00000008398	RAB5C	99	88.018	ENSKMAG00000017417	-	99	88.018	Kryptolebias_marmoratus
ENSPPYG00000008398	RAB5C	99	88.889	ENSKMAG00000020038	rab5c	98	90.741	Kryptolebias_marmoratus
ENSPPYG00000008398	RAB5C	99	90.278	ENSLBEG00000004128	rab5c	98	91.667	Labrus_bergylta
ENSPPYG00000008398	RAB5C	100	87.615	ENSLBEG00000010408	-	99	87.615	Labrus_bergylta
ENSPPYG00000008398	RAB5C	99	93.925	ENSLOCG00000012566	rab5c	100	93.925	Lepisosteus_oculatus
ENSPPYG00000008398	RAB5C	100	100.000	ENSMFAG00000039627	RAB5C	100	100.000	Macaca_fascicularis
ENSPPYG00000008398	RAB5C	100	100.000	ENSMNEG00000000355	RAB5C	100	100.000	Macaca_nemestrina
ENSPPYG00000008398	RAB5C	99	88.018	ENSMAMG00000016207	-	99	88.018	Mastacembelus_armatus
ENSPPYG00000008398	RAB5C	99	88.426	ENSMAMG00000022322	rab5c	98	90.278	Mastacembelus_armatus
ENSPPYG00000008398	RAB5C	96	89.100	ENSMZEG00005021090	-	99	88.584	Maylandia_zebra
ENSPPYG00000008398	RAB5C	99	87.963	ENSMZEG00005022735	rab5c	98	90.278	Maylandia_zebra
ENSPPYG00000008398	RAB5C	100	99.074	ENSMAUG00000015005	Rab5c	100	99.074	Mesocricetus_auratus
ENSPPYG00000008398	RAB5C	100	99.074	ENSMICG00000041608	RAB5C	100	99.074	Microcebus_murinus
ENSPPYG00000008398	RAB5C	100	98.148	ENSMOCG00000018531	-	100	98.148	Microtus_ochrogaster
ENSPPYG00000008398	RAB5C	100	89.450	ENSMMOG00000020621	rab5c	99	89.450	Mola_mola
ENSPPYG00000008398	RAB5C	99	87.156	ENSMALG00000022348	-	99	87.156	Monopterus_albus
ENSPPYG00000008398	RAB5C	97	84.834	ENSMALG00000006052	rab5c	96	84.651	Monopterus_albus
ENSPPYG00000008398	RAB5C	100	98.611	MGP_CAROLIEiJ_G0017184	Rab5c	100	98.611	Mus_caroli
ENSPPYG00000008398	RAB5C	100	98.611	ENSMUSG00000019173	Rab5c	100	98.611	Mus_musculus
ENSPPYG00000008398	RAB5C	100	98.611	MGP_PahariEiJ_G0018314	Rab5c	100	98.611	Mus_pahari
ENSPPYG00000008398	RAB5C	100	98.611	MGP_SPRETEiJ_G0018027	Rab5c	100	98.611	Mus_spretus
ENSPPYG00000008398	RAB5C	100	99.074	ENSMPUG00000010554	RAB5C	100	99.074	Mustela_putorius_furo
ENSPPYG00000008398	RAB5C	100	98.148	ENSNGAG00000010286	Rab5c	100	98.148	Nannospalax_galili
ENSPPYG00000008398	RAB5C	96	89.100	ENSNBRG00000016922	-	99	88.584	Neolamprologus_brichardi
ENSPPYG00000008398	RAB5C	99	88.889	ENSNBRG00000018165	rab5c	98	91.204	Neolamprologus_brichardi
ENSPPYG00000008398	RAB5C	82	92.697	ENSOPRG00000008255	RAB5C	100	92.697	Ochotona_princeps
ENSPPYG00000008398	RAB5C	100	96.296	ENSODEG00000017920	RAB5C	100	96.296	Octodon_degus
ENSPPYG00000008398	RAB5C	99	88.889	ENSONIG00000001113	rab5c	98	91.204	Oreochromis_niloticus
ENSPPYG00000008398	RAB5C	100	88.073	ENSORLG00000003882	rab5c	100	89.450	Oryzias_latipes
ENSPPYG00000008398	RAB5C	100	88.991	ENSORLG00020008388	rab5c	100	88.991	Oryzias_latipes_hni
ENSPPYG00000008398	RAB5C	100	88.073	ENSORLG00015021900	rab5c	100	89.450	Oryzias_latipes_hsok
ENSPPYG00000008398	RAB5C	100	88.073	ENSOMEG00000023078	rab5c	100	89.450	Oryzias_melastigma
ENSPPYG00000008398	RAB5C	100	99.074	ENSOGAG00000009456	RAB5C	100	99.074	Otolemur_garnettii
ENSPPYG00000008398	RAB5C	100	99.074	ENSOARG00000018768	RAB5C	100	99.074	Ovis_aries
ENSPPYG00000008398	RAB5C	100	100.000	ENSPPAG00000037206	RAB5C	100	100.000	Pan_paniscus
ENSPPYG00000008398	RAB5C	100	99.074	ENSPPRG00000005745	RAB5C	100	99.074	Panthera_pardus
ENSPPYG00000008398	RAB5C	100	99.074	ENSPTIG00000008177	RAB5C	100	99.074	Panthera_tigris_altaica
ENSPPYG00000008398	RAB5C	100	100.000	ENSPTRG00000009194	RAB5C	100	100.000	Pan_troglodytes
ENSPPYG00000008398	RAB5C	99	87.500	ENSPKIG00000020112	-	99	87.500	Paramormyrops_kingsleyae
ENSPPYG00000008398	RAB5C	99	89.767	ENSPKIG00000001237	-	99	89.767	Paramormyrops_kingsleyae
ENSPPYG00000008398	RAB5C	99	86.111	ENSPMGG00000010792	rab5c	97	89.573	Periophthalmus_magnuspinnatus
ENSPPYG00000008398	RAB5C	100	98.148	ENSPEMG00000017971	Rab5c	100	98.148	Peromyscus_maniculatus_bairdii
ENSPPYG00000008398	RAB5C	99	78.972	ENSPMAG00000007867	rab5c	99	78.972	Petromyzon_marinus
ENSPPYG00000008398	RAB5C	99	79.535	ENSPMAG00000001399	rab5c	100	79.535	Petromyzon_marinus
ENSPPYG00000008398	RAB5C	99	78.829	ENSPMAG00000000008	rab5c	100	78.829	Petromyzon_marinus
ENSPPYG00000008398	RAB5C	100	97.685	ENSPCIG00000020225	-	100	97.685	Phascolarctos_cinereus
ENSPPYG00000008398	RAB5C	99	89.815	ENSPLAG00000004790	rab5c	98	91.204	Poecilia_latipinna
ENSPPYG00000008398	RAB5C	99	89.862	ENSPLAG00000016333	-	99	89.862	Poecilia_latipinna
ENSPPYG00000008398	RAB5C	99	89.815	ENSPMEG00000011336	rab5c	98	91.204	Poecilia_mexicana
ENSPPYG00000008398	RAB5C	98	88.732	ENSPMEG00000012614	-	98	88.584	Poecilia_mexicana
ENSPPYG00000008398	RAB5C	87	92.593	ENSPREG00000022167	-	89	93.989	Poecilia_reticulata
ENSPPYG00000008398	RAB5C	99	89.815	ENSPREG00000010146	rab5c	98	91.204	Poecilia_reticulata
ENSPPYG00000008398	RAB5C	100	98.148	ENSPCAG00000016412	RAB5C	100	98.148	Procavia_capensis
ENSPPYG00000008398	RAB5C	100	98.148	ENSPCOG00000026327	RAB5C	100	98.148	Propithecus_coquereli
ENSPPYG00000008398	RAB5C	100	99.537	ENSPVAG00000003867	RAB5C	100	99.537	Pteropus_vampyrus
ENSPPYG00000008398	RAB5C	99	87.963	ENSPNYG00000010615	rab5c	98	90.278	Pundamilia_nyererei
ENSPPYG00000008398	RAB5C	96	89.100	ENSPNYG00000015851	-	99	88.584	Pundamilia_nyererei
ENSPPYG00000008398	RAB5C	99	91.705	ENSPNAG00000028138	rab5c	98	91.705	Pygocentrus_nattereri
ENSPPYG00000008398	RAB5C	97	86.792	ENSPNAG00000002218	-	99	89.151	Pygocentrus_nattereri
ENSPPYG00000008398	RAB5C	100	99.074	ENSRNOG00000018568	Rab5c	100	99.074	Rattus_norvegicus
ENSPPYG00000008398	RAB5C	100	100.000	ENSRBIG00000031376	RAB5C	100	100.000	Rhinopithecus_bieti
ENSPPYG00000008398	RAB5C	100	100.000	ENSRROG00000032895	RAB5C	100	100.000	Rhinopithecus_roxellana
ENSPPYG00000008398	RAB5C	100	98.611	ENSSBOG00000032552	-	100	98.611	Saimiri_boliviensis_boliviensis
ENSPPYG00000008398	RAB5C	100	98.148	ENSSHAG00000005267	-	100	98.148	Sarcophilus_harrisii
ENSPPYG00000008398	RAB5C	99	87.097	ENSSFOG00015009988	-	99	87.097	Scleropages_formosus
ENSPPYG00000008398	RAB5C	96	91.827	ENSSMAG00000007323	rab5c	98	89.815	Scophthalmus_maximus
ENSPPYG00000008398	RAB5C	99	91.204	ENSSDUG00000023008	rab5c	98	91.204	Seriola_dumerili
ENSPPYG00000008398	RAB5C	99	90.741	ENSSLDG00000017771	rab5c	98	90.741	Seriola_lalandi_dorsalis
ENSPPYG00000008398	RAB5C	100	95.833	ENSSPUG00000012950	-	100	95.833	Sphenodon_punctatus
ENSPPYG00000008398	RAB5C	99	89.815	ENSSPAG00000006436	rab5c	98	92.130	Stegastes_partitus
ENSPPYG00000008398	RAB5C	100	99.074	ENSSSCG00000032467	RAB5C	100	99.074	Sus_scrofa
ENSPPYG00000008398	RAB5C	99	87.963	ENSTRUG00000015590	rab5c	98	90.278	Takifugu_rubripes
ENSPPYG00000008398	RAB5C	96	90.909	ENSTNIG00000011711	rab5c	95	90.909	Tetraodon_nigroviridis
ENSPPYG00000008398	RAB5C	100	99.537	ENSTBEG00000007092	RAB5C	100	99.537	Tupaia_belangeri
ENSPPYG00000008398	RAB5C	100	98.148	ENSTTRG00000006673	RAB5C	100	98.148	Tursiops_truncatus
ENSPPYG00000008398	RAB5C	100	99.074	ENSUAMG00000024343	RAB5C	100	99.074	Ursus_americanus
ENSPPYG00000008398	RAB5C	100	99.074	ENSUMAG00000023270	RAB5C	100	99.074	Ursus_maritimus
ENSPPYG00000008398	RAB5C	96	91.429	ENSXCOG00000006300	-	99	88.235	Xiphophorus_couchianus
ENSPPYG00000008398	RAB5C	99	89.352	ENSXCOG00000016788	rab5c	98	91.204	Xiphophorus_couchianus
ENSPPYG00000008398	RAB5C	99	89.815	ENSXMAG00000003266	rab5c	98	91.204	Xiphophorus_maculatus
ENSPPYG00000008398	RAB5C	99	90.323	ENSXMAG00000022179	-	99	90.323	Xiphophorus_maculatus