EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPPYG00000008531 (Gene tree)
Gene ID: 100173349
Gene Symbol: DDX42
Alias: RHELP|RNAHP|SF3B8|SF3b125
Full Name: DEAD-box helicase 42
Gene Type: protein_coding
Species: Pongo_abelii
Status: putative
Strand: Plus strand
Length: 36769 bases
Position: chr17:53495871-53532639
Accession: 18676
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPPYP00000009583	ResIII	PF04851.15	4e-06	1	1
ENSPPYP00000009584	ResIII	PF04851.15	1e-05	1	1
ENSPPYP00000009584	DEAD	PF00270.29	1.4e-43	1	1
ENSPPYP00000009583	DEAD	PF00270.29	3.4e-42	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPPYT00000009967	DDX42-202	3085	-	ENSPPYP00000009584	942 (aa)	-	H2NUE8
ENSPPYT00000009966	DDX42-201	4007	-	ENSPPYP00000009583	943 (aa)	-	H2NUE7

Gene Model

Click here to download ENSPPYG00000008531's gene model file

Pathways

Pathway ID	Pathway Name	Source
pon03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPPYG00000008531's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPPYG00000008531	DDX42	58	37.611	ENSPPYG00000008547	DDX5	83	38.506

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPPYG00000008531	DDX42	100	97.240	ENSG00000198231	DDX42	100	100.000	Homo_sapiens
ENSPPYG00000008531	DDX42	92	73.196	ENSAPOG00000017675	ddx42	98	71.382	Acanthochromis_polyacanthus
ENSPPYG00000008531	DDX42	100	94.174	ENSAMEG00000003200	DDX42	100	94.174	Ailuropoda_melanoleuca
ENSPPYG00000008531	DDX42	73	74.111	ENSACIG00000007376	ddx42	99	68.995	Amphilophus_citrinellus
ENSPPYG00000008531	DDX42	99	69.030	ENSAOCG00000003520	ddx42	99	69.615	Amphiprion_ocellaris
ENSPPYG00000008531	DDX42	92	73.486	ENSAPEG00000000984	ddx42	99	69.833	Amphiprion_percula
ENSPPYG00000008531	DDX42	99	69.738	ENSATEG00000022920	ddx42	99	70.126	Anabas_testudineus
ENSPPYG00000008531	DDX42	100	82.304	ENSAPLG00000010544	DDX42	100	80.595	Anas_platyrhynchos
ENSPPYG00000008531	DDX42	100	81.646	ENSACAG00000003994	DDX42	99	81.933	Anolis_carolinensis
ENSPPYG00000008531	DDX42	100	96.178	ENSANAG00000035693	DDX42	100	96.178	Aotus_nancymaae
ENSPPYG00000008531	DDX42	88	75.388	ENSACLG00000025113	ddx42	99	70.262	Astatotilapia_calliptera
ENSPPYG00000008531	DDX42	100	91.728	ENSBTAG00000021058	DDX42	100	92.251	Bos_taurus
ENSPPYG00000008531	DDX42	63	51.101	WBGene00008119	C46F11.4	78	51.330	Caenorhabditis_elegans
ENSPPYG00000008531	DDX42	100	96.072	ENSCJAG00000019649	DDX42	99	97.255	Callithrix_jacchus
ENSPPYG00000008531	DDX42	100	94.062	ENSCAFG00000012818	DDX42	100	94.062	Canis_familiaris
ENSPPYG00000008531	DDX42	100	94.168	ENSCAFG00020026631	DDX42	100	94.168	Canis_lupus_dingo
ENSPPYG00000008531	DDX42	100	93.031	ENSCHIG00000014431	DDX42	100	93.136	Capra_hircus
ENSPPYG00000008531	DDX42	100	92.895	ENSTSYG00000001380	DDX42	100	92.895	Carlito_syrichta
ENSPPYG00000008531	DDX42	72	73.235	ENSCAPG00000013621	DDX42	94	73.235	Cavia_aperea
ENSPPYG00000008531	DDX42	100	92.381	ENSCPOG00000005633	DDX42	100	92.381	Cavia_porcellus
ENSPPYG00000008531	DDX42	100	90.764	ENSCCAG00000020612	DDX42	100	95.477	Cebus_capucinus
ENSPPYG00000008531	DDX42	100	96.921	ENSCATG00000030490	DDX42	100	96.921	Cercocebus_atys
ENSPPYG00000008531	DDX42	100	93.432	ENSCLAG00000003497	DDX42	100	93.432	Chinchilla_lanigera
ENSPPYG00000008531	DDX42	100	93.242	ENSCSAG00000003914	DDX42	100	93.242	Chlorocebus_sabaeus
ENSPPYG00000008531	DDX42	79	95.495	ENSCHOG00000006241	DDX42	79	95.495	Choloepus_hoffmanni
ENSPPYG00000008531	DDX42	100	82.073	ENSCPBG00000026682	DDX42	100	81.535	Chrysemys_picta_bellii
ENSPPYG00000008531	DDX42	100	97.028	ENSCANG00000034663	DDX42	100	97.028	Colobus_angolensis_palliatus
ENSPPYG00000008531	DDX42	100	92.259	ENSCGRG00001009775	Ddx42	100	92.259	Cricetulus_griseus_chok1gshd
ENSPPYG00000008531	DDX42	100	92.259	ENSCGRG00000011718	Ddx42	100	92.259	Cricetulus_griseus_crigri
ENSPPYG00000008531	DDX42	89	72.373	ENSCSEG00000021574	ddx42	99	67.650	Cynoglossus_semilaevis
ENSPPYG00000008531	DDX42	99	67.861	ENSCVAG00000011404	ddx42	99	68.737	Cyprinodon_variegatus
ENSPPYG00000008531	DDX42	99	67.009	ENSDARG00000037928	ddx42	99	68.789	Danio_rerio
ENSPPYG00000008531	DDX42	100	87.315	ENSDNOG00000007961	DDX42	100	87.315	Dasypus_novemcinctus
ENSPPYG00000008531	DDX42	100	85.037	ENSDORG00000004199	Ddx42	100	84.721	Dipodomys_ordii
ENSPPYG00000008531	DDX42	65	58.805	FBgn0036104	CG6418	87	54.545	Drosophila_melanogaster
ENSPPYG00000008531	DDX42	79	71.504	ENSEBUG00000001155	ddx42	91	71.372	Eptatretus_burgeri
ENSPPYG00000008531	DDX42	100	94.592	ENSEASG00005013089	DDX42	100	94.592	Equus_asinus_asinus
ENSPPYG00000008531	DDX42	100	94.592	ENSECAG00000022684	DDX42	100	94.592	Equus_caballus
ENSPPYG00000008531	DDX42	67	100.000	ENSEEUG00000009144	DDX42	85	100.000	Erinaceus_europaeus
ENSPPYG00000008531	DDX42	100	67.883	ENSELUG00000020593	ddx42	100	68.125	Esox_lucius
ENSPPYG00000008531	DDX42	100	94.910	ENSFCAG00000003499	DDX42	100	94.910	Felis_catus
ENSPPYG00000008531	DDX42	94	83.221	ENSFALG00000004675	DDX42	72	86.571	Ficedula_albicollis
ENSPPYG00000008531	DDX42	100	93.122	ENSFDAG00000020516	DDX42	100	93.122	Fukomys_damarensis
ENSPPYG00000008531	DDX42	99	66.947	ENSFHEG00000023290	ddx42	99	67.954	Fundulus_heteroclitus
ENSPPYG00000008531	DDX42	75	75.882	ENSGMOG00000004595	ddx42	79	75.882	Gadus_morhua
ENSPPYG00000008531	DDX42	100	80.328	ENSGALG00000000581	DDX42	100	79.352	Gallus_gallus
ENSPPYG00000008531	DDX42	89	72.695	ENSGAFG00000011846	ddx42	96	71.254	Gambusia_affinis
ENSPPYG00000008531	DDX42	99	65.681	ENSGACG00000009782	ddx42	99	64.669	Gasterosteus_aculeatus
ENSPPYG00000008531	DDX42	100	81.790	ENSGAGG00000024411	DDX42	99	81.497	Gopherus_agassizii
ENSPPYG00000008531	DDX42	100	97.240	ENSGGOG00000006779	DDX42	100	97.240	Gorilla_gorilla
ENSPPYG00000008531	DDX42	88	75.627	ENSHBUG00000008705	ddx42	99	70.471	Haplochromis_burtoni
ENSPPYG00000008531	DDX42	100	88.865	ENSHGLG00000010024	DDX42	100	88.865	Heterocephalus_glaber_female
ENSPPYG00000008531	DDX42	100	93.743	ENSHGLG00100004479	-	100	93.743	Heterocephalus_glaber_male
ENSPPYG00000008531	DDX42	94	70.362	ENSHGLG00100007138	-	95	70.362	Heterocephalus_glaber_male
ENSPPYG00000008531	DDX42	82	76.418	ENSHCOG00000003357	ddx42	96	72.849	Hippocampus_comes
ENSPPYG00000008531	DDX42	79	77.851	ENSIPUG00000013327	ddx42	100	67.366	Ictalurus_punctatus
ENSPPYG00000008531	DDX42	100	94.603	ENSSTOG00000008922	DDX42	100	94.603	Ictidomys_tridecemlineatus
ENSPPYG00000008531	DDX42	100	92.479	ENSJJAG00000011727	Ddx42	100	92.479	Jaculus_jaculus
ENSPPYG00000008531	DDX42	83	77.030	ENSKMAG00000009914	ddx42	99	69.135	Kryptolebias_marmoratus
ENSPPYG00000008531	DDX42	89	69.222	ENSLBEG00000004687	ddx42	99	64.212	Labrus_bergylta
ENSPPYG00000008531	DDX42	99	74.231	ENSLACG00000013476	DDX42	97	75.422	Latimeria_chalumnae
ENSPPYG00000008531	DDX42	100	72.140	ENSLOCG00000011764	ddx42	100	71.958	Lepisosteus_oculatus
ENSPPYG00000008531	DDX42	100	93.955	ENSLAFG00000003249	DDX42	100	93.955	Loxodonta_africana
ENSPPYG00000008531	DDX42	100	96.921	ENSMFAG00000031356	DDX42	100	96.921	Macaca_fascicularis
ENSPPYG00000008531	DDX42	100	96.497	ENSMMUG00000016762	DDX42	100	96.598	Macaca_mulatta
ENSPPYG00000008531	DDX42	100	96.921	ENSMNEG00000038250	DDX42	100	96.921	Macaca_nemestrina
ENSPPYG00000008531	DDX42	100	97.028	ENSMLEG00000043080	DDX42	100	97.028	Mandrillus_leucophaeus
ENSPPYG00000008531	DDX42	91	73.988	ENSMAMG00000021888	ddx42	98	69.565	Mastacembelus_armatus
ENSPPYG00000008531	DDX42	88	75.388	ENSMZEG00005023103	ddx42	99	70.262	Maylandia_zebra
ENSPPYG00000008531	DDX42	100	80.573	ENSMGAG00000001822	DDX42	100	79.192	Meleagris_gallopavo
ENSPPYG00000008531	DDX42	75	94.602	ENSMAUG00000020774	-	94	94.602	Mesocricetus_auratus
ENSPPYG00000008531	DDX42	100	94.586	ENSMICG00000009952	DDX42	100	93.949	Microcebus_murinus
ENSPPYG00000008531	DDX42	100	91.729	ENSMOCG00000015504	Ddx42	100	91.516	Microtus_ochrogaster
ENSPPYG00000008531	DDX42	89	70.119	ENSMMOG00000016963	ddx42	86	68.607	Mola_mola
ENSPPYG00000008531	DDX42	50	94.004	ENSMODG00000009917	-	98	94.004	Monodelphis_domestica
ENSPPYG00000008531	DDX42	99	69.360	ENSMALG00000007800	ddx42	99	70.222	Monopterus_albus
ENSPPYG00000008531	DDX42	100	93.001	MGP_CAROLIEiJ_G0017314	Ddx42	100	93.001	Mus_caroli
ENSPPYG00000008531	DDX42	100	93.001	ENSMUSG00000020705	Ddx42	100	93.001	Mus_musculus
ENSPPYG00000008531	DDX42	75	96.866	MGP_PahariEiJ_G0018444	-	100	96.866	Mus_pahari
ENSPPYG00000008531	DDX42	100	93.001	MGP_SPRETEiJ_G0018158	Ddx42	100	93.001	Mus_spretus
ENSPPYG00000008531	DDX42	100	94.310	ENSMPUG00000014921	DDX42	100	94.310	Mustela_putorius_furo
ENSPPYG00000008531	DDX42	100	91.745	ENSMLUG00000011645	DDX42	100	92.790	Myotis_lucifugus
ENSPPYG00000008531	DDX42	100	92.797	ENSNGAG00000021897	Ddx42	100	92.797	Nannospalax_galili
ENSPPYG00000008531	DDX42	88	74.074	ENSNBRG00000004466	ddx42	99	69.110	Neolamprologus_brichardi
ENSPPYG00000008531	DDX42	100	97.134	ENSNLEG00000004248	DDX42	100	97.134	Nomascus_leucogenys
ENSPPYG00000008531	DDX42	74	79.518	ENSMEUG00000013227	-	85	79.518	Notamacropus_eugenii
ENSPPYG00000008531	DDX42	100	92.812	ENSOPRG00000014960	DDX42	100	92.812	Ochotona_princeps
ENSPPYG00000008531	DDX42	100	89.831	ENSODEG00000007810	DDX42	100	89.831	Octodon_degus
ENSPPYG00000008531	DDX42	88	75.269	ENSONIG00000000734	ddx42	99	69.688	Oreochromis_niloticus
ENSPPYG00000008531	DDX42	57	89.054	ENSOANG00000000265	DDX42	100	89.054	Ornithorhynchus_anatinus
ENSPPYG00000008531	DDX42	96	93.046	ENSOCUG00000004304	DDX42	89	92.952	Oryctolagus_cuniculus
ENSPPYG00000008531	DDX42	100	66.770	ENSORLG00000002395	ddx42	100	67.051	Oryzias_latipes
ENSPPYG00000008531	DDX42	100	68.267	ENSORLG00020011621	ddx42	100	68.252	Oryzias_latipes_hni
ENSPPYG00000008531	DDX42	100	68.163	ENSORLG00015004487	ddx42	100	68.046	Oryzias_latipes_hsok
ENSPPYG00000008531	DDX42	82	78.021	ENSOMEG00000020093	ddx42	100	68.926	Oryzias_melastigma
ENSPPYG00000008531	DDX42	100	94.055	ENSOGAG00000006872	DDX42	100	94.055	Otolemur_garnettii
ENSPPYG00000008531	DDX42	100	91.946	ENSOARG00000013540	DDX42	100	92.469	Ovis_aries
ENSPPYG00000008531	DDX42	100	97.452	ENSPPAG00000007496	DDX42	100	97.452	Pan_paniscus
ENSPPYG00000008531	DDX42	100	94.698	ENSPPRG00000002740	DDX42	100	94.698	Panthera_pardus
ENSPPYG00000008531	DDX42	100	94.592	ENSPTIG00000009932	DDX42	100	94.592	Panthera_tigris_altaica
ENSPPYG00000008531	DDX42	100	97.452	ENSPTRG00000009523	DDX42	100	97.452	Pan_troglodytes
ENSPPYG00000008531	DDX42	100	96.921	ENSPANG00000020990	DDX42	100	96.921	Papio_anubis
ENSPPYG00000008531	DDX42	79	79.627	ENSPKIG00000002901	ddx42	99	68.038	Paramormyrops_kingsleyae
ENSPPYG00000008531	DDX42	85	89.814	ENSPSIG00000010289	DDX42	98	89.655	Pelodiscus_sinensis
ENSPPYG00000008531	DDX42	89	70.449	ENSPMGG00000009323	ddx42	100	65.789	Periophthalmus_magnuspinnatus
ENSPPYG00000008531	DDX42	100	92.683	ENSPEMG00000006755	Ddx42	100	92.683	Peromyscus_maniculatus_bairdii
ENSPPYG00000008531	DDX42	79	70.210	ENSPMAG00000005580	ddx42	100	70.866	Petromyzon_marinus
ENSPPYG00000008531	DDX42	100	89.852	ENSPCIG00000009093	DDX42	100	89.535	Phascolarctos_cinereus
ENSPPYG00000008531	DDX42	99	67.183	ENSPFOG00000014104	ddx42	99	68.705	Poecilia_formosa
ENSPPYG00000008531	DDX42	99	67.183	ENSPLAG00000010522	ddx42	99	68.705	Poecilia_latipinna
ENSPPYG00000008531	DDX42	100	67.218	ENSPMEG00000010744	ddx42	99	69.561	Poecilia_mexicana
ENSPPYG00000008531	DDX42	100	66.530	ENSPREG00000009926	ddx42	99	68.711	Poecilia_reticulata
ENSPPYG00000008531	DDX42	92	87.227	ENSPCAG00000002474	DDX42	100	87.227	Procavia_capensis
ENSPPYG00000008531	DDX42	100	84.926	ENSPCOG00000001559	DDX42	98	87.463	Propithecus_coquereli
ENSPPYG00000008531	DDX42	100	89.936	ENSPVAG00000000160	DDX42	100	89.936	Pteropus_vampyrus
ENSPPYG00000008531	DDX42	73	72.779	ENSPNYG00000013954	ddx42	97	67.076	Pundamilia_nyererei
ENSPPYG00000008531	DDX42	100	92.683	ENSRNOG00000009474	Ddx42	100	92.683	Rattus_norvegicus
ENSPPYG00000008531	DDX42	100	96.815	ENSRBIG00000004781	DDX42	100	96.815	Rhinopithecus_bieti
ENSPPYG00000008531	DDX42	100	96.921	ENSRROG00000029794	DDX42	100	96.921	Rhinopithecus_roxellana
ENSPPYG00000008531	DDX42	100	96.178	ENSSBOG00000029624	DDX42	100	96.178	Saimiri_boliviensis_boliviensis
ENSPPYG00000008531	DDX42	100	90.063	ENSSHAG00000012896	-	100	89.746	Sarcophilus_harrisii
ENSPPYG00000008531	DDX42	71	59.496	ENSSHAG00000007919	-	99	59.050	Sarcophilus_harrisii
ENSPPYG00000008531	DDX42	81	78.378	ENSSFOG00015014064	ddx42	83	78.378	Scleropages_formosus
ENSPPYG00000008531	DDX42	89	73.467	ENSSMAG00000009077	ddx42	99	69.289	Scophthalmus_maximus
ENSPPYG00000008531	DDX42	99	69.167	ENSSDUG00000022221	ddx42	99	69.375	Seriola_dumerili
ENSPPYG00000008531	DDX42	99	68.980	ENSSLDG00000018483	ddx42	99	68.875	Seriola_lalandi_dorsalis
ENSPPYG00000008531	DDX42	100	92.789	ENSSARG00000009847	DDX42	100	92.789	Sorex_araneus
ENSPPYG00000008531	DDX42	100	81.903	ENSSPUG00000018806	DDX42	100	80.266	Sphenodon_punctatus
ENSPPYG00000008531	DDX42	89	74.676	ENSSPAG00000013055	ddx42	99	69.439	Stegastes_partitus
ENSPPYG00000008531	DDX42	86	91.646	ENSSSCG00000017289	DDX42	97	92.260	Sus_scrofa
ENSPPYG00000008531	DDX42	100	81.061	ENSTGUG00000001931	DDX42	100	81.061	Taeniopygia_guttata
ENSPPYG00000008531	DDX42	90	72.248	ENSTRUG00000010711	ddx42	99	77.778	Takifugu_rubripes
ENSPPYG00000008531	DDX42	81	91.579	ENSTBEG00000010159	DDX42	99	91.579	Tupaia_belangeri
ENSPPYG00000008531	DDX42	100	94.068	ENSTTRG00000006962	DDX42	100	94.068	Tursiops_truncatus
ENSPPYG00000008531	DDX42	100	94.068	ENSUAMG00000007321	DDX42	100	94.068	Ursus_americanus
ENSPPYG00000008531	DDX42	100	93.432	ENSUMAG00000017438	DDX42	100	93.432	Ursus_maritimus
ENSPPYG00000008531	DDX42	100	85.578	ENSVPAG00000009633	DDX42	100	85.578	Vicugna_pacos
ENSPPYG00000008531	DDX42	100	94.380	ENSVVUG00000006095	DDX42	100	94.380	Vulpes_vulpes
ENSPPYG00000008531	DDX42	100	74.170	ENSXETG00000003245	ddx42	100	73.368	Xenopus_tropicalis
ENSPPYG00000008531	DDX42	85	67.698	ENSXCOG00000017560	ddx42	97	67.980	Xiphophorus_couchianus
ENSPPYG00000008531	DDX42	100	68.737	ENSXMAG00000008138	ddx42	99	69.255	Xiphophorus_maculatus