EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPPYG00000008679 (Gene tree)
Gene ID: -
Gene Symbol: TNRC6C
Alias: FLJ20015|KIAA1582
Full Name: trinucleotide repeat containing 6C
Gene Type: protein_coding
Species: Pongo_abelii
Status: putative
Strand: Plus strand
Length: 102203 bases
Position: chr17:68042460-68144662
Accession: 100442985
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPPYP00000009747	Ago_hook	PF10427.9	5.8e-22	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPPYT00000010134	TNRC6C-201	5914	XM_024234662	ENSPPYP00000009747	1961 (aa)	XP_024090430	H2NUV6

Gene Model

Click here to download ENSPPYG00000008679's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPPYG00000008679's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPPYG00000008679	TNRC6C	99	43.533	ENSPPYG00000007202	TNRC6A	98	42.746
ENSPPYG00000008679	TNRC6C	94	40.651	ENSPPYG00000011849	TNRC6B	99	42.581

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPPYG00000008679	TNRC6C	99	99.126	ENSG00000078687	TNRC6C	100	99.479	Homo_sapiens
ENSPPYG00000008679	TNRC6C	71	53.077	ENSAPOG00000019749	tnrc6c1	98	49.285	Acanthochromis_polyacanthus
ENSPPYG00000008679	TNRC6C	92	89.896	ENSAMEG00000013756	TNRC6C	99	89.786	Ailuropoda_melanoleuca
ENSPPYG00000008679	TNRC6C	92	48.470	ENSACIG00000008075	tnrc6c1	98	54.646	Amphilophus_citrinellus
ENSPPYG00000008679	TNRC6C	68	64.955	ENSAOCG00000023968	tnrc6c1	99	49.305	Amphiprion_ocellaris
ENSPPYG00000008679	TNRC6C	71	53.930	ENSAPEG00000009020	tnrc6c1	99	49.202	Amphiprion_percula
ENSPPYG00000008679	TNRC6C	97	87.026	ENSAPLG00000005456	TNRC6C	100	86.936	Anas_platyrhynchos
ENSPPYG00000008679	TNRC6C	98	86.749	ENSACAG00000016198	TNRC6C	99	86.505	Anolis_carolinensis
ENSPPYG00000008679	TNRC6C	99	98.147	ENSANAG00000021554	TNRC6C	100	98.147	Aotus_nancymaae
ENSPPYG00000008679	TNRC6C	92	48.677	ENSACLG00000000424	tnrc6c1	98	53.533	Astatotilapia_calliptera
ENSPPYG00000008679	TNRC6C	98	88.275	ENSBTAG00000018658	TNRC6C	100	88.548	Bos_taurus
ENSPPYG00000008679	TNRC6C	99	98.044	ENSCJAG00000019431	TNRC6C	100	98.044	Callithrix_jacchus
ENSPPYG00000008679	TNRC6C	98	91.954	ENSCAFG00000005224	TNRC6C	99	91.962	Canis_familiaris
ENSPPYG00000008679	TNRC6C	97	91.549	ENSCAFG00020006661	TNRC6C	99	91.549	Canis_lupus_dingo
ENSPPYG00000008679	TNRC6C	97	87.893	ENSCHIG00000026004	TNRC6C	98	87.945	Capra_hircus
ENSPPYG00000008679	TNRC6C	88	96.116	ENSTSYG00000005403	TNRC6C	100	96.116	Carlito_syrichta
ENSPPYG00000008679	TNRC6C	97	83.778	ENSCAPG00000007307	TNRC6C	99	83.866	Cavia_aperea
ENSPPYG00000008679	TNRC6C	98	88.860	ENSCPOG00000000467	TNRC6C	100	88.845	Cavia_porcellus
ENSPPYG00000008679	TNRC6C	99	98.199	ENSCCAG00000030524	TNRC6C	100	98.609	Cebus_capucinus
ENSPPYG00000008679	TNRC6C	99	98.662	ENSCATG00000033135	TNRC6C	100	99.188	Cercocebus_atys
ENSPPYG00000008679	TNRC6C	98	91.066	ENSCLAG00000011139	TNRC6C	99	91.014	Chinchilla_lanigera
ENSPPYG00000008679	TNRC6C	99	99.018	ENSCSAG00000005167	TNRC6C	100	99.018	Chlorocebus_sabaeus
ENSPPYG00000008679	TNRC6C	69	86.976	ENSCHOG00000000088	TNRC6C	75	85.952	Choloepus_hoffmanni
ENSPPYG00000008679	TNRC6C	91	86.622	ENSCPBG00000027960	TNRC6C	100	86.177	Chrysemys_picta_bellii
ENSPPYG00000008679	TNRC6C	99	98.353	ENSCANG00000041771	TNRC6C	100	98.783	Colobus_angolensis_palliatus
ENSPPYG00000008679	TNRC6C	98	87.240	ENSCGRG00001022686	Tnrc6c	100	86.613	Cricetulus_griseus_chok1gshd
ENSPPYG00000008679	TNRC6C	98	87.572	ENSCGRG00000018041	Tnrc6c	100	86.613	Cricetulus_griseus_crigri
ENSPPYG00000008679	TNRC6C	71	51.495	ENSCSEG00000012744	tnrc6c1	98	47.313	Cynoglossus_semilaevis
ENSPPYG00000008679	TNRC6C	97	51.207	ENSDARG00000076847	tnrc6c1	99	54.484	Danio_rerio
ENSPPYG00000008679	TNRC6C	99	89.959	ENSDNOG00000003247	TNRC6C	99	89.833	Dasypus_novemcinctus
ENSPPYG00000008679	TNRC6C	97	83.977	ENSDORG00000004558	Tnrc6c	100	84.207	Dipodomys_ordii
ENSPPYG00000008679	TNRC6C	81	80.404	ENSETEG00000005527	TNRC6C	89	80.851	Echinops_telfairi
ENSPPYG00000008679	TNRC6C	88	89.571	ENSEASG00005004799	TNRC6C	100	89.571	Equus_asinus_asinus
ENSPPYG00000008679	TNRC6C	97	91.562	ENSECAG00000012486	TNRC6C	99	91.300	Equus_caballus
ENSPPYG00000008679	TNRC6C	87	92.217	ENSEEUG00000010008	TNRC6C	96	92.217	Erinaceus_europaeus
ENSPPYG00000008679	TNRC6C	98	88.669	ENSFCAG00000028358	TNRC6C	99	88.629	Felis_catus
ENSPPYG00000008679	TNRC6C	88	87.067	ENSFALG00000000848	TNRC6C	100	86.387	Ficedula_albicollis
ENSPPYG00000008679	TNRC6C	91	89.803	ENSFDAG00000010368	TNRC6C	100	90.197	Fukomys_damarensis
ENSPPYG00000008679	TNRC6C	93	69.659	ENSFHEG00000002936	tnrc6c1	99	48.364	Fundulus_heteroclitus
ENSPPYG00000008679	TNRC6C	92	89.234	ENSGALG00000001725	TNRC6C	99	89.068	Gallus_gallus
ENSPPYG00000008679	TNRC6C	98	47.539	ENSGAFG00000019019	tnrc6c1	100	48.076	Gambusia_affinis
ENSPPYG00000008679	TNRC6C	94	52.427	ENSGACG00000012320	tnrc6c1	97	47.813	Gasterosteus_aculeatus
ENSPPYG00000008679	TNRC6C	91	88.022	ENSGAGG00000022043	TNRC6C	99	87.874	Gopherus_agassizii
ENSPPYG00000008679	TNRC6C	99	98.457	ENSGGOG00000011304	TNRC6C	100	98.725	Gorilla_gorilla
ENSPPYG00000008679	TNRC6C	96	45.945	ENSHBUG00000010846	tnrc6c1	98	53.767	Haplochromis_burtoni
ENSPPYG00000008679	TNRC6C	98	90.591	ENSHGLG00000004809	TNRC6C	99	90.548	Heterocephalus_glaber_female
ENSPPYG00000008679	TNRC6C	98	89.693	ENSHGLG00100012597	TNRC6C	99	89.912	Heterocephalus_glaber_male
ENSPPYG00000008679	TNRC6C	98	51.210	ENSIPUG00000000818	tnrc6c1	98	51.813	Ictalurus_punctatus
ENSPPYG00000008679	TNRC6C	98	89.126	ENSSTOG00000009101	TNRC6C	100	89.252	Ictidomys_tridecemlineatus
ENSPPYG00000008679	TNRC6C	98	86.681	ENSJJAG00000017055	Tnrc6c	99	86.642	Jaculus_jaculus
ENSPPYG00000008679	TNRC6C	99	48.283	ENSKMAG00000021023	tnrc6c1	100	49.464	Kryptolebias_marmoratus
ENSPPYG00000008679	TNRC6C	91	74.554	ENSLACG00000015283	TNRC6C	100	74.693	Latimeria_chalumnae
ENSPPYG00000008679	TNRC6C	98	71.988	ENSLOCG00000013377	tnrc6c1	99	55.865	Lepisosteus_oculatus
ENSPPYG00000008679	TNRC6C	98	89.496	ENSLAFG00000011122	TNRC6C	99	89.178	Loxodonta_africana
ENSPPYG00000008679	TNRC6C	97	98.747	ENSMFAG00000043943	TNRC6C	100	99.304	Macaca_fascicularis
ENSPPYG00000008679	TNRC6C	99	98.976	ENSMMUG00000011924	TNRC6C	99	98.976	Macaca_mulatta
ENSPPYG00000008679	TNRC6C	99	98.765	ENSMNEG00000030405	TNRC6C	100	98.765	Macaca_nemestrina
ENSPPYG00000008679	TNRC6C	99	98.765	ENSMLEG00000033436	TNRC6C	100	99.246	Mandrillus_leucophaeus
ENSPPYG00000008679	TNRC6C	83	54.937	ENSMAMG00000023613	tnrc6c1	100	51.397	Mastacembelus_armatus
ENSPPYG00000008679	TNRC6C	96	47.134	ENSMZEG00005010920	tnrc6c1	98	53.533	Maylandia_zebra
ENSPPYG00000008679	TNRC6C	97	80.965	ENSMGAG00000003906	TNRC6C	100	81.049	Meleagris_gallopavo
ENSPPYG00000008679	TNRC6C	88	87.709	ENSMAUG00000021618	Tnrc6c	100	87.594	Mesocricetus_auratus
ENSPPYG00000008679	TNRC6C	98	94.375	ENSMICG00000003952	TNRC6C	100	94.493	Microcebus_murinus
ENSPPYG00000008679	TNRC6C	98	89.479	ENSMOCG00000015879	Tnrc6c	100	89.577	Microtus_ochrogaster
ENSPPYG00000008679	TNRC6C	82	54.533	ENSMMOG00000005203	tnrc6c1	100	49.667	Mola_mola
ENSPPYG00000008679	TNRC6C	98	85.387	ENSMODG00000001785	TNRC6C	99	85.091	Monodelphis_domestica
ENSPPYG00000008679	TNRC6C	98	88.750	MGP_CAROLIEiJ_G0017465	Tnrc6c	100	89.183	Mus_caroli
ENSPPYG00000008679	TNRC6C	98	88.490	ENSMUSG00000025571	Tnrc6c	100	88.958	Mus_musculus
ENSPPYG00000008679	TNRC6C	98	88.594	MGP_PahariEiJ_G0018593	Tnrc6c	100	89.014	Mus_pahari
ENSPPYG00000008679	TNRC6C	99	88.690	MGP_SPRETEiJ_G0018309	Tnrc6c	100	89.014	Mus_spretus
ENSPPYG00000008679	TNRC6C	98	88.727	ENSMPUG00000013348	TNRC6C	98	89.353	Mustela_putorius_furo
ENSPPYG00000008679	TNRC6C	99	82.532	ENSMLUG00000014431	TNRC6C	98	82.611	Myotis_lucifugus
ENSPPYG00000008679	TNRC6C	98	88.906	ENSNGAG00000012203	Tnrc6c	99	88.814	Nannospalax_galili
ENSPPYG00000008679	TNRC6C	91	53.581	ENSNBRG00000005344	tnrc6c1	98	54.527	Neolamprologus_brichardi
ENSPPYG00000008679	TNRC6C	98	95.511	ENSNLEG00000000047	TNRC6C	99	95.511	Nomascus_leucogenys
ENSPPYG00000008679	TNRC6C	88	80.104	ENSMEUG00000005104	TNRC6C	99	90.104	Notamacropus_eugenii
ENSPPYG00000008679	TNRC6C	88	90.493	ENSODEG00000012499	TNRC6C	100	90.667	Octodon_degus
ENSPPYG00000008679	TNRC6C	83	50.030	ENSONIG00000002210	tnrc6c1	96	52.326	Oreochromis_niloticus
ENSPPYG00000008679	TNRC6C	97	60.925	ENSOANG00000009758	-	100	60.925	Ornithorhynchus_anatinus
ENSPPYG00000008679	TNRC6C	82	80.305	ENSOCUG00000006122	TNRC6C	95	78.500	Oryctolagus_cuniculus
ENSPPYG00000008679	TNRC6C	92	46.924	ENSORLG00000009837	tnrc6c1	100	67.286	Oryzias_latipes
ENSPPYG00000008679	TNRC6C	92	47.747	ENSORLG00020016510	tnrc6c1	100	49.103	Oryzias_latipes_hni
ENSPPYG00000008679	TNRC6C	73	43.287	ENSORLG00015000171	tnrc6c1	98	44.882	Oryzias_latipes_hsok
ENSPPYG00000008679	TNRC6C	92	48.463	ENSOMEG00000000357	tnrc6c1	99	48.502	Oryzias_melastigma
ENSPPYG00000008679	TNRC6C	88	93.217	ENSOGAG00000007197	TNRC6C	100	93.217	Otolemur_garnettii
ENSPPYG00000008679	TNRC6C	94	85.536	ENSOARG00000006041	TNRC6C	97	85.878	Ovis_aries
ENSPPYG00000008679	TNRC6C	98	98.649	ENSPPAG00000027160	TNRC6C	100	99.420	Pan_paniscus
ENSPPYG00000008679	TNRC6C	98	88.669	ENSPPRG00000018881	TNRC6C	99	88.629	Panthera_pardus
ENSPPYG00000008679	TNRC6C	87	86.486	ENSPTIG00000008791	TNRC6C	89	86.667	Panthera_tigris_altaica
ENSPPYG00000008679	TNRC6C	99	99.074	ENSPTRG00000009699	TNRC6C	100	99.420	Pan_troglodytes
ENSPPYG00000008679	TNRC6C	99	98.765	ENSPANG00000019994	TNRC6C	100	98.765	Papio_anubis
ENSPPYG00000008679	TNRC6C	85	52.894	ENSPKIG00000005428	tnrc6c1	100	51.799	Paramormyrops_kingsleyae
ENSPPYG00000008679	TNRC6C	91	84.663	ENSPSIG00000018069	TNRC6C	100	84.607	Pelodiscus_sinensis
ENSPPYG00000008679	TNRC6C	65	57.505	ENSPMGG00000022911	tnrc6c1	97	62.857	Periophthalmus_magnuspinnatus
ENSPPYG00000008679	TNRC6C	98	88.906	ENSPEMG00000009785	Tnrc6c	99	88.918	Peromyscus_maniculatus_bairdii
ENSPPYG00000008679	TNRC6C	95	47.871	ENSPFOG00000012560	tnrc6c1	97	57.307	Poecilia_formosa
ENSPPYG00000008679	TNRC6C	88	49.748	ENSPLAG00000021055	tnrc6c1	100	49.831	Poecilia_latipinna
ENSPPYG00000008679	TNRC6C	85	85.249	ENSPCAG00000012510	TNRC6C	94	85.033	Procavia_capensis
ENSPPYG00000008679	TNRC6C	88	95.072	ENSPCOG00000021451	TNRC6C	100	95.072	Propithecus_coquereli
ENSPPYG00000008679	TNRC6C	87	88.983	ENSPVAG00000002008	TNRC6C	95	88.983	Pteropus_vampyrus
ENSPPYG00000008679	TNRC6C	92	48.490	ENSPNYG00000014477	tnrc6c1	98	53.302	Pundamilia_nyererei
ENSPPYG00000008679	TNRC6C	88	88.535	ENSRNOG00000022395	Tnrc6c	100	88.535	Rattus_norvegicus
ENSPPYG00000008679	TNRC6C	97	98.642	ENSRBIG00000027777	TNRC6C	100	99.130	Rhinopithecus_bieti
ENSPPYG00000008679	TNRC6C	99	98.713	ENSRROG00000042912	TNRC6C	100	99.188	Rhinopithecus_roxellana
ENSPPYG00000008679	TNRC6C	99	97.684	ENSSBOG00000023981	TNRC6C	100	98.087	Saimiri_boliviensis_boliviensis
ENSPPYG00000008679	TNRC6C	89	57.851	ENSSFOG00015006475	tnrc6c1	99	52.161	Scleropages_formosus
ENSPPYG00000008679	TNRC6C	74	56.660	ENSSFOG00015004735	-	99	59.398	Scleropages_formosus
ENSPPYG00000008679	TNRC6C	91	47.083	ENSSMAG00000012761	tnrc6c1	99	49.549	Scophthalmus_maximus
ENSPPYG00000008679	TNRC6C	92	48.727	ENSSDUG00000002366	tnrc6c1	99	50.000	Seriola_dumerili
ENSPPYG00000008679	TNRC6C	88	47.847	ENSSLDG00000025613	tnrc6c1	100	48.993	Seriola_lalandi_dorsalis
ENSPPYG00000008679	TNRC6C	83	88.235	ENSSARG00000006816	TNRC6C	91	88.235	Sorex_araneus
ENSPPYG00000008679	TNRC6C	79	86.875	ENSSPUG00000007341	TNRC6C	98	86.389	Sphenodon_punctatus
ENSPPYG00000008679	TNRC6C	69	53.920	ENSSPAG00000014977	tnrc6c1	97	49.192	Stegastes_partitus
ENSPPYG00000008679	TNRC6C	85	91.180	ENSSSCG00000034373	TNRC6C	100	85.747	Sus_scrofa
ENSPPYG00000008679	TNRC6C	91	86.685	ENSTGUG00000007733	TNRC6C	100	86.517	Taeniopygia_guttata
ENSPPYG00000008679	TNRC6C	86	51.997	ENSTRUG00000011685	tnrc6c1	100	49.640	Takifugu_rubripes
ENSPPYG00000008679	TNRC6C	86	52.809	ENSTNIG00000005273	tnrc6c1	100	60.746	Tetraodon_nigroviridis
ENSPPYG00000008679	TNRC6C	57	84.830	ENSTBEG00000005046	TNRC6C	100	79.422	Tupaia_belangeri
ENSPPYG00000008679	TNRC6C	91	89.326	ENSTTRG00000010828	TNRC6C	99	89.326	Tursiops_truncatus
ENSPPYG00000008679	TNRC6C	98	89.528	ENSUMAG00000013614	TNRC6C	99	89.756	Ursus_maritimus
ENSPPYG00000008679	TNRC6C	88	90.330	ENSVVUG00000015268	TNRC6C	100	90.272	Vulpes_vulpes
ENSPPYG00000008679	TNRC6C	88	73.751	ENSXETG00000019470	tnrc6c	100	73.406	Xenopus_tropicalis
ENSPPYG00000008679	TNRC6C	95	48.349	ENSXMAG00000025971	tnrc6c1	99	48.938	Xiphophorus_maculatus