EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPPYG00000009158 (Gene tree)
Gene ID: -
Gene Symbol: MBD1
Alias: CXXC3|PCM1
Full Name: methyl-CpG binding domain protein 1
Gene Type: protein_coding
Species: Pongo_abelii
Status: putative
Strand: Minus strand
Length: 9303 bases
Position: chr18:62657130-62666432
Accession: 6916
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPPYP00000010290	MBD	PF01429.19	2.6e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPPYT00000010696	MBD1-201	2411	-	ENSPPYP00000010290	667 (aa)	-	H2NWC7

Gene Model

Click here to download ENSPPYG00000009158's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPPYG00000009158's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPPYG00000009158	MBD1	91	99.504	ENSG00000141644	MBD1	100	99.504	Homo_sapiens
ENSPPYG00000009158	MBD1	92	84.087	ENSAMEG00000000238	MBD1	96	84.567	Ailuropoda_melanoleuca
ENSPPYG00000009158	MBD1	57	45.545	ENSACAG00000006091	-	100	44.554	Anolis_carolinensis
ENSPPYG00000009158	MBD1	89	96.791	ENSANAG00000036253	MBD1	100	93.016	Aotus_nancymaae
ENSPPYG00000009158	MBD1	91	86.304	ENSBTAG00000003801	MBD1	100	86.469	Bos_taurus
ENSPPYG00000009158	MBD1	89	97.128	ENSCJAG00000004959	MBD1	100	91.589	Callithrix_jacchus
ENSPPYG00000009158	MBD1	92	83.125	ENSCAFG00000018928	MBD1	96	83.912	Canis_familiaris
ENSPPYG00000009158	MBD1	90	82.504	ENSCAFG00020024272	MBD1	97	83.307	Canis_lupus_dingo
ENSPPYG00000009158	MBD1	91	86.304	ENSCHIG00000021134	MBD1	100	87.129	Capra_hircus
ENSPPYG00000009158	MBD1	89	91.047	ENSTSYG00000000509	MBD1	100	87.460	Carlito_syrichta
ENSPPYG00000009158	MBD1	89	65.257	ENSCAPG00000015782	MBD1	96	65.257	Cavia_aperea
ENSPPYG00000009158	MBD1	91	68.827	ENSCPOG00000001671	MBD1	100	72.897	Cavia_porcellus
ENSPPYG00000009158	MBD1	94	93.271	ENSCCAG00000034600	MBD1	90	94.764	Cebus_capucinus
ENSPPYG00000009158	MBD1	91	99.339	ENSCATG00000029959	MBD1	100	99.339	Cercocebus_atys
ENSPPYG00000009158	MBD1	94	81.135	ENSCLAG00000007457	MBD1	89	82.437	Chinchilla_lanigera
ENSPPYG00000009158	MBD1	91	99.669	ENSCSAG00000018070	MBD1	100	99.669	Chlorocebus_sabaeus
ENSPPYG00000009158	MBD1	91	99.339	ENSCANG00000033425	MBD1	100	99.339	Colobus_angolensis_palliatus
ENSPPYG00000009158	MBD1	91	74.713	ENSCGRG00001014843	Mbd1	100	74.713	Cricetulus_griseus_chok1gshd
ENSPPYG00000009158	MBD1	90	58.863	ENSCGRG00000014135	Mbd1	96	58.696	Cricetulus_griseus_crigri
ENSPPYG00000009158	MBD1	91	77.813	ENSDNOG00000015998	MBD1	100	80.032	Dasypus_novemcinctus
ENSPPYG00000009158	MBD1	81	78.963	ENSDORG00000013917	Mbd1	97	78.963	Dipodomys_ordii
ENSPPYG00000009158	MBD1	91	84.323	ENSEASG00005003857	MBD1	100	84.652	Equus_asinus_asinus
ENSPPYG00000009158	MBD1	93	86.129	ENSECAG00000011497	MBD1	81	88.033	Equus_caballus
ENSPPYG00000009158	MBD1	89	88.215	ENSFCAG00000015730	MBD1	100	85.443	Felis_catus
ENSPPYG00000009158	MBD1	82	80.480	ENSFDAG00000011085	MBD1	96	80.781	Fukomys_damarensis
ENSPPYG00000009158	MBD1	57	30.946	ENSGACG00000012106	-	50	60.656	Gasterosteus_aculeatus
ENSPPYG00000009158	MBD1	91	99.174	ENSGGOG00000016966	MBD1	100	99.174	Gorilla_gorilla
ENSPPYG00000009158	MBD1	91	85.950	ENSHGLG00000008740	MBD1	100	85.950	Heterocephalus_glaber_female
ENSPPYG00000009158	MBD1	80	90.152	ENSHGLG00100005198	MBD1	100	81.433	Heterocephalus_glaber_male
ENSPPYG00000009158	MBD1	91	83.252	ENSSTOG00000007780	MBD1	100	83.577	Ictidomys_tridecemlineatus
ENSPPYG00000009158	MBD1	89	70.302	ENSJJAG00000022859	Mbd1	96	67.839	Jaculus_jaculus
ENSPPYG00000009158	MBD1	59	40.100	ENSLACG00000002414	-	58	39.747	Latimeria_chalumnae
ENSPPYG00000009158	MBD1	90	75.954	ENSLAFG00000031328	MBD1	97	75.954	Loxodonta_africana
ENSPPYG00000009158	MBD1	91	99.174	ENSMFAG00000026335	MBD1	100	99.174	Macaca_fascicularis
ENSPPYG00000009158	MBD1	91	95.238	ENSMMUG00000009050	MBD1	100	95.238	Macaca_mulatta
ENSPPYG00000009158	MBD1	91	99.174	ENSMNEG00000038822	MBD1	100	99.174	Macaca_nemestrina
ENSPPYG00000009158	MBD1	91	99.504	ENSMLEG00000043121	MBD1	100	99.504	Mandrillus_leucophaeus
ENSPPYG00000009158	MBD1	91	89.919	ENSMICG00000006414	MBD1	100	90.244	Microcebus_murinus
ENSPPYG00000009158	MBD1	59	43.447	ENSMODG00000001286	-	58	42.683	Monodelphis_domestica
ENSPPYG00000009158	MBD1	90	67.250	ENSMUSG00000024561	Mbd1	97	67.834	Mus_musculus
ENSPPYG00000009158	MBD1	91	68.045	MGP_PahariEiJ_G0019128	Mbd1	100	67.886	Mus_pahari
ENSPPYG00000009158	MBD1	89	68.720	MGP_SPRETEiJ_G0023304	Mbd1	99	69.156	Mus_spretus
ENSPPYG00000009158	MBD1	92	83.931	ENSMPUG00000008843	MBD1	96	84.409	Mustela_putorius_furo
ENSPPYG00000009158	MBD1	93	81.115	ENSMLUG00000008286	MBD1	96	81.833	Myotis_lucifugus
ENSPPYG00000009158	MBD1	89	68.152	ENSNGAG00000011412	Mbd1	96	68.317	Nannospalax_galili
ENSPPYG00000009158	MBD1	91	98.843	ENSNLEG00000011661	-	100	98.843	Nomascus_leucogenys
ENSPPYG00000009158	MBD1	89	79.561	ENSNLEG00000032711	-	89	79.561	Nomascus_leucogenys
ENSPPYG00000009158	MBD1	91	74.876	ENSOPRG00000007647	MBD1	100	74.876	Ochotona_princeps
ENSPPYG00000009158	MBD1	84	80.556	ENSODEG00000018451	MBD1	97	80.556	Octodon_degus
ENSPPYG00000009158	MBD1	77	47.477	ENSOANG00000014593	-	100	48.295	Ornithorhynchus_anatinus
ENSPPYG00000009158	MBD1	91	80.032	ENSOCUG00000006554	MBD1	100	80.824	Oryctolagus_cuniculus
ENSPPYG00000009158	MBD1	92	84.129	ENSOGAG00000003784	MBD1	97	84.137	Otolemur_garnettii
ENSPPYG00000009158	MBD1	91	82.362	ENSOARG00000004218	MBD1	95	83.150	Ovis_aries
ENSPPYG00000009158	MBD1	91	99.339	ENSPPAG00000038886	MBD1	100	99.339	Pan_paniscus
ENSPPYG00000009158	MBD1	91	88.633	ENSPPRG00000021387	MBD1	100	89.127	Panthera_pardus
ENSPPYG00000009158	MBD1	91	88.633	ENSPTIG00000021231	MBD1	100	89.127	Panthera_tigris_altaica
ENSPPYG00000009158	MBD1	91	99.339	ENSPTRG00000010021	MBD1	100	99.339	Pan_troglodytes
ENSPPYG00000009158	MBD1	89	99.493	ENSPANG00000010867	MBD1	100	95.556	Papio_anubis
ENSPPYG00000009158	MBD1	90	59.481	ENSPEMG00000022630	Mbd1	97	59.416	Peromyscus_maniculatus_bairdii
ENSPPYG00000009158	MBD1	87	47.627	ENSPCIG00000027937	-	79	46.972	Phascolarctos_cinereus
ENSPPYG00000009158	MBD1	91	76.529	ENSPCAG00000001648	MBD1	99	76.529	Procavia_capensis
ENSPPYG00000009158	MBD1	91	92.574	ENSPCOG00000012450	MBD1	100	92.574	Propithecus_coquereli
ENSPPYG00000009158	MBD1	90	51.212	ENSRNOG00000024104	Mbd1	96	51.212	Rattus_norvegicus
ENSPPYG00000009158	MBD1	91	88.730	ENSRBIG00000041294	MBD1	100	91.074	Rhinopithecus_bieti
ENSPPYG00000009158	MBD1	91	99.174	ENSRROG00000032517	MBD1	100	99.174	Rhinopithecus_roxellana
ENSPPYG00000009158	MBD1	89	96.284	ENSSBOG00000027169	MBD1	90	96.284	Saimiri_boliviensis_boliviensis
ENSPPYG00000009158	MBD1	69	46.253	ENSSHAG00000003661	-	100	47.335	Sarcophilus_harrisii
ENSPPYG00000009158	MBD1	91	86.281	ENSSSCG00000004516	MBD1	100	86.281	Sus_scrofa
ENSPPYG00000009158	MBD1	62	83.750	ENSTBEG00000012651	-	68	83.750	Tupaia_belangeri
ENSPPYG00000009158	MBD1	91	85.008	ENSTTRG00000015523	MBD1	100	85.667	Tursiops_truncatus
ENSPPYG00000009158	MBD1	91	83.168	ENSUAMG00000004752	MBD1	100	84.158	Ursus_americanus
ENSPPYG00000009158	MBD1	91	87.974	ENSUMAG00000002947	MBD1	100	88.468	Ursus_maritimus