EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPPYG00000009428 (Gene tree)
Gene ID: 100174056
Gene Symbol: SAFB
Alias: SAFB1
Full Name: Pongo abelii scaffold attachment factor B (SAFB)%2C mRNA.
Gene Type: protein_coding
Species: Pongo_abelii
Status: putative
Strand: Plus strand
Length: 45514 bases
Position: chr19:5638353-5683866
Accession: NM_001133559
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPPYP00000010573	RRM_5	PF13893.6	2.2e-07	1	1
ENSPPYP00000010573	RRM_1	PF00076.22	2.4e-13	1	1
ENSPPYP00000010573	SAP	PF02037.27	7.5e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPPYT00000010988	-	3034	XM_009252633	ENSPPYP00000010573	914 (aa)	XP_009250908	H2NX54

Gene Model

Click here to download ENSPPYG00000009428's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPPYG00000009428's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPPYG00000009428	SAFB	100	69.770	ENSPPYG00000009427	SAFB2	98	69.206

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPPYG00000009428	SAFB	100	99.672	ENSG00000160633	SAFB	100	99.672	Homo_sapiens
ENSPPYG00000009428	SAFB	89	45.213	ENSAPOG00000022508	safb	65	43.291	Acanthochromis_polyacanthus
ENSPPYG00000009428	SAFB	100	92.174	ENSAMEG00000012254	SAFB	98	92.076	Ailuropoda_melanoleuca
ENSPPYG00000009428	SAFB	94	40.022	ENSACIG00000006247	safb	95	43.508	Amphilophus_citrinellus
ENSPPYG00000009428	SAFB	92	44.022	ENSAOCG00000006308	safb	71	42.834	Amphiprion_ocellaris
ENSPPYG00000009428	SAFB	89	44.816	ENSAPEG00000023342	safb	66	42.743	Amphiprion_percula
ENSPPYG00000009428	SAFB	95	41.649	ENSATEG00000004998	safb	66	42.400	Anabas_testudineus
ENSPPYG00000009428	SAFB	93	65.553	ENSAPLG00000005780	-	100	64.706	Anas_platyrhynchos
ENSPPYG00000009428	SAFB	89	63.409	ENSAPLG00000006355	-	99	64.839	Anas_platyrhynchos
ENSPPYG00000009428	SAFB	100	98.253	ENSANAG00000028821	SAFB	100	98.253	Aotus_nancymaae
ENSPPYG00000009428	SAFB	89	43.060	ENSACLG00000001926	safb	64	42.998	Astatotilapia_calliptera
ENSPPYG00000009428	SAFB	91	44.264	ENSAMXG00000018154	safb	64	43.648	Astyanax_mexicanus
ENSPPYG00000009428	SAFB	100	88.877	ENSBTAG00000007875	SAFB	100	88.877	Bos_taurus
ENSPPYG00000009428	SAFB	88	98.585	ENSCJAG00000017081	SAFB	100	98.694	Callithrix_jacchus
ENSPPYG00000009428	SAFB	100	93.777	ENSCAFG00000018803	SAFB	87	93.777	Canis_familiaris
ENSPPYG00000009428	SAFB	100	93.777	ENSCAFG00020018943	SAFB	100	93.777	Canis_lupus_dingo
ENSPPYG00000009428	SAFB	100	87.459	ENSCHIG00000007262	SAFB	98	92.453	Capra_hircus
ENSPPYG00000009428	SAFB	58	80.639	ENSTSYG00000001851	-	54	93.040	Carlito_syrichta
ENSPPYG00000009428	SAFB	93	71.542	ENSCAPG00000012121	SAFB	77	83.557	Cavia_aperea
ENSPPYG00000009428	SAFB	100	87.473	ENSCPOG00000026322	SAFB	100	87.261	Cavia_porcellus
ENSPPYG00000009428	SAFB	100	98.582	ENSCCAG00000020193	SAFB	100	98.582	Cebus_capucinus
ENSPPYG00000009428	SAFB	100	99.345	ENSCATG00000029994	SAFB	100	99.345	Cercocebus_atys
ENSPPYG00000009428	SAFB	100	88.474	ENSCLAG00000007734	SAFB	100	89.221	Chinchilla_lanigera
ENSPPYG00000009428	SAFB	100	99.236	ENSCSAG00000009949	SAFB	100	99.236	Chlorocebus_sabaeus
ENSPPYG00000009428	SAFB	87	92.857	ENSCHOG00000003208	SAFB	100	78.571	Choloepus_hoffmanni
ENSPPYG00000009428	SAFB	91	65.207	ENSCPBG00000010928	-	99	64.455	Chrysemys_picta_bellii
ENSPPYG00000009428	SAFB	91	61.695	ENSCPBG00000010936	-	99	61.695	Chrysemys_picta_bellii
ENSPPYG00000009428	SAFB	100	92.888	ENSCANG00000019754	-	100	92.779	Colobus_angolensis_palliatus
ENSPPYG00000009428	SAFB	100	86.354	ENSCANG00000004774	-	100	99.517	Colobus_angolensis_palliatus
ENSPPYG00000009428	SAFB	100	83.885	ENSCGRG00001002254	Safb	100	83.885	Cricetulus_griseus_chok1gshd
ENSPPYG00000009428	SAFB	90	80.871	ENSCGRG00000011529	Safb	96	80.871	Cricetulus_griseus_crigri
ENSPPYG00000009428	SAFB	94	41.947	ENSCSEG00000019870	safb	69	41.234	Cynoglossus_semilaevis
ENSPPYG00000009428	SAFB	94	39.887	ENSCVAG00000002226	safb	94	39.644	Cyprinodon_variegatus
ENSPPYG00000009428	SAFB	92	42.308	ENSDARG00000020467	safb	60	59.167	Danio_rerio
ENSPPYG00000009428	SAFB	100	92.157	ENSDNOG00000015746	SAFB	95	92.683	Dasypus_novemcinctus
ENSPPYG00000009428	SAFB	100	82.397	ENSDORG00000016200	Safb	100	82.627	Dipodomys_ordii
ENSPPYG00000009428	SAFB	80	86.232	ENSETEG00000018679	SAFB	85	86.232	Echinops_telfairi
ENSPPYG00000009428	SAFB	100	88.612	ENSEASG00005023019	SAFB	100	88.829	Equus_asinus_asinus
ENSPPYG00000009428	SAFB	100	91.266	ENSECAG00000018659	SAFB	89	91.266	Equus_caballus
ENSPPYG00000009428	SAFB	94	42.320	ENSELUG00000022327	safb	68	44.179	Esox_lucius
ENSPPYG00000009428	SAFB	100	93.246	ENSFCAG00000011835	SAFB	100	93.246	Felis_catus
ENSPPYG00000009428	SAFB	100	65.484	ENSFALG00000013882	-	89	64.745	Ficedula_albicollis
ENSPPYG00000009428	SAFB	91	59.729	ENSFALG00000013881	-	99	60.158	Ficedula_albicollis
ENSPPYG00000009428	SAFB	100	74.866	ENSFDAG00000020306	SAFB	100	88.732	Fukomys_damarensis
ENSPPYG00000009428	SAFB	94	37.585	ENSFHEG00000004219	safb	66	40.426	Fundulus_heteroclitus
ENSPPYG00000009428	SAFB	59	45.855	ENSGMOG00000014280	safb	65	40.226	Gadus_morhua
ENSPPYG00000009428	SAFB	100	60.766	ENSGALG00000001948	-	97	63.365	Gallus_gallus
ENSPPYG00000009428	SAFB	100	65.124	ENSGALG00000013365	-	97	64.850	Gallus_gallus
ENSPPYG00000009428	SAFB	94	38.158	ENSGAFG00000016162	safb	67	38.975	Gambusia_affinis
ENSPPYG00000009428	SAFB	95	42.213	ENSGACG00000011385	safb	66	41.214	Gasterosteus_aculeatus
ENSPPYG00000009428	SAFB	95	62.931	ENSGAGG00000008424	-	97	63.293	Gopherus_agassizii
ENSPPYG00000009428	SAFB	72	60.237	ENSGAGG00000017702	-	100	58.112	Gopherus_agassizii
ENSPPYG00000009428	SAFB	100	99.345	ENSGGOG00000015109	SAFB	100	99.345	Gorilla_gorilla
ENSPPYG00000009428	SAFB	95	39.438	ENSHBUG00000009218	safb	70	42.626	Haplochromis_burtoni
ENSPPYG00000009428	SAFB	100	90.880	ENSHGLG00000015883	SAFB	100	90.880	Heterocephalus_glaber_female
ENSPPYG00000009428	SAFB	100	79.318	ENSHGLG00100004228	SAFB	77	89.555	Heterocephalus_glaber_male
ENSPPYG00000009428	SAFB	91	37.558	ENSHCOG00000001705	safb	66	38.488	Hippocampus_comes
ENSPPYG00000009428	SAFB	97	45.197	ENSIPUG00000024869	safb2	64	44.733	Ictalurus_punctatus
ENSPPYG00000009428	SAFB	93	90.899	ENSSTOG00000002783	SAFB	100	90.899	Ictidomys_tridecemlineatus
ENSPPYG00000009428	SAFB	100	85.441	ENSJJAG00000009021	Safb	100	85.866	Jaculus_jaculus
ENSPPYG00000009428	SAFB	89	44.380	ENSKMAG00000022308	safb	95	42.825	Kryptolebias_marmoratus
ENSPPYG00000009428	SAFB	95	41.712	ENSLBEG00000006015	safb	65	44.481	Labrus_bergylta
ENSPPYG00000009428	SAFB	64	53.223	ENSLACG00000018090	SAFB	100	53.992	Latimeria_chalumnae
ENSPPYG00000009428	SAFB	97	46.939	ENSLOCG00000003613	safb	75	45.942	Lepisosteus_oculatus
ENSPPYG00000009428	SAFB	99	90.533	ENSLAFG00000003840	SAFB	100	89.336	Loxodonta_africana
ENSPPYG00000009428	SAFB	100	99.237	ENSMFAG00000003885	SAFB	100	99.237	Macaca_fascicularis
ENSPPYG00000009428	SAFB	100	99.345	ENSMMUG00000017970	SAFB	100	99.345	Macaca_mulatta
ENSPPYG00000009428	SAFB	100	95.529	ENSMNEG00000035637	SAFB	100	95.529	Macaca_nemestrina
ENSPPYG00000009428	SAFB	100	93.043	ENSMLEG00000038637	SAFB	100	93.043	Mandrillus_leucophaeus
ENSPPYG00000009428	SAFB	95	40.850	ENSMAMG00000003357	safb	60	40.968	Mastacembelus_armatus
ENSPPYG00000009428	SAFB	95	42.169	ENSMZEG00005009120	safb	66	43.450	Maylandia_zebra
ENSPPYG00000009428	SAFB	97	63.991	ENSMGAG00000001101	-	100	63.393	Meleagris_gallopavo
ENSPPYG00000009428	SAFB	89	58.243	ENSMGAG00000001051	-	97	60.697	Meleagris_gallopavo
ENSPPYG00000009428	SAFB	53	90.760	ENSMAUG00000005013	Safb	100	90.760	Mesocricetus_auratus
ENSPPYG00000009428	SAFB	100	92.048	ENSMICG00000008739	-	100	91.285	Microcebus_murinus
ENSPPYG00000009428	SAFB	85	80.794	ENSMICG00000046795	-	98	92.553	Microcebus_murinus
ENSPPYG00000009428	SAFB	100	84.026	ENSMOCG00000014040	Safb	100	84.026	Microtus_ochrogaster
ENSPPYG00000009428	SAFB	100	74.867	ENSMODG00000001236	SAFB	98	75.873	Monodelphis_domestica
ENSPPYG00000009428	SAFB	93	41.240	ENSMALG00000020330	safb	70	42.097	Monopterus_albus
ENSPPYG00000009428	SAFB	100	84.435	MGP_CAROLIEiJ_G0021780	Safb	100	84.435	Mus_caroli
ENSPPYG00000009428	SAFB	100	84.542	ENSMUSG00000071054	Safb	100	84.542	Mus_musculus
ENSPPYG00000009428	SAFB	100	84.345	MGP_PahariEiJ_G0020769	Safb	100	84.345	Mus_pahari
ENSPPYG00000009428	SAFB	100	92.702	ENSMPUG00000006123	SAFB	94	92.702	Mustela_putorius_furo
ENSPPYG00000009428	SAFB	100	91.176	ENSMLUG00000001081	SAFB	100	91.176	Myotis_lucifugus
ENSPPYG00000009428	SAFB	100	81.972	ENSNGAG00000019882	Safb	100	81.972	Nannospalax_galili
ENSPPYG00000009428	SAFB	96	99.544	ENSNLEG00000013551	SAFB	100	99.544	Nomascus_leucogenys
ENSPPYG00000009428	SAFB	88	84.360	ENSOPRG00000011561	-	100	85.591	Ochotona_princeps
ENSPPYG00000009428	SAFB	100	90.502	ENSODEG00000014838	SAFB	100	90.502	Octodon_degus
ENSPPYG00000009428	SAFB	95	42.261	ENSONIG00000002318	safb	66	43.528	Oreochromis_niloticus
ENSPPYG00000009428	SAFB	90	81.490	ENSOCUG00000014628	SAFB	65	85.448	Oryctolagus_cuniculus
ENSPPYG00000009428	SAFB	89	41.427	ENSORLG00000016989	safb	66	39.365	Oryzias_latipes
ENSPPYG00000009428	SAFB	94	40.438	ENSORLG00020000404	safb	98	39.302	Oryzias_latipes_hni
ENSPPYG00000009428	SAFB	94	40.964	ENSORLG00015010733	safb	66	39.524	Oryzias_latipes_hsok
ENSPPYG00000009428	SAFB	95	38.877	ENSOMEG00000009066	safb	67	39.652	Oryzias_melastigma
ENSPPYG00000009428	SAFB	100	90.217	ENSOGAG00000027769	SAFB	100	89.913	Otolemur_garnettii
ENSPPYG00000009428	SAFB	78	82.493	ENSOARG00000007856	-	100	82.213	Ovis_aries
ENSPPYG00000009428	SAFB	100	84.967	ENSOARG00000007662	-	100	84.423	Ovis_aries
ENSPPYG00000009428	SAFB	100	99.346	ENSPPAG00000035129	SAFB	100	99.346	Pan_paniscus
ENSPPYG00000009428	SAFB	100	93.246	ENSPPRG00000017197	SAFB	100	93.246	Panthera_pardus
ENSPPYG00000009428	SAFB	100	99.346	ENSPTRG00000010335	SAFB	100	99.346	Pan_troglodytes
ENSPPYG00000009428	SAFB	100	99.128	ENSPANG00000007770	SAFB	100	99.128	Papio_anubis
ENSPPYG00000009428	SAFB	95	43.011	ENSPKIG00000009902	safb	67	46.226	Paramormyrops_kingsleyae
ENSPPYG00000009428	SAFB	100	62.105	ENSPSIG00000011679	-	100	63.472	Pelodiscus_sinensis
ENSPPYG00000009428	SAFB	99	61.474	ENSPSIG00000009367	-	64	60.263	Pelodiscus_sinensis
ENSPPYG00000009428	SAFB	100	84.632	ENSPEMG00000020428	Safb	100	84.632	Peromyscus_maniculatus_bairdii
ENSPPYG00000009428	SAFB	58	81.331	ENSPCIG00000009504	-	99	82.329	Phascolarctos_cinereus
ENSPPYG00000009428	SAFB	94	39.185	ENSPFOG00000007745	safb	94	40.869	Poecilia_formosa
ENSPPYG00000009428	SAFB	94	38.583	ENSPLAG00000001614	safb	95	39.465	Poecilia_latipinna
ENSPPYG00000009428	SAFB	94	39.253	ENSPMEG00000021023	safb	98	40.812	Poecilia_mexicana
ENSPPYG00000009428	SAFB	100	86.428	ENSPCAG00000006475	SAFB	100	86.754	Procavia_capensis
ENSPPYG00000009428	SAFB	100	88.056	ENSPCOG00000014090	SAFB	100	87.731	Propithecus_coquereli
ENSPPYG00000009428	SAFB	100	84.188	ENSPVAG00000004913	SAFB	100	84.515	Pteropus_vampyrus
ENSPPYG00000009428	SAFB	93	45.050	ENSPNAG00000021838	safb	97	44.457	Pygocentrus_nattereri
ENSPPYG00000009428	SAFB	100	84.485	ENSRNOG00000050543	Safb	100	85.016	Rattus_norvegicus
ENSPPYG00000009428	SAFB	100	84.481	ENSRBIG00000042509	SAFB	88	98.925	Rhinopithecus_bieti
ENSPPYG00000009428	SAFB	100	99.346	ENSRROG00000029278	SAFB	100	99.346	Rhinopithecus_roxellana
ENSPPYG00000009428	SAFB	100	98.690	ENSSBOG00000026291	SAFB	100	98.690	Saimiri_boliviensis_boliviensis
ENSPPYG00000009428	SAFB	95	44.361	ENSSFOG00015008156	safb	89	46.086	Scleropages_formosus
ENSPPYG00000009428	SAFB	95	40.825	ENSSMAG00000009316	safb	66	42.381	Scophthalmus_maximus
ENSPPYG00000009428	SAFB	95	41.538	ENSSDUG00000009652	safb	70	42.122	Seriola_dumerili
ENSPPYG00000009428	SAFB	95	43.333	ENSSLDG00000001670	safb	65	41.838	Seriola_lalandi_dorsalis
ENSPPYG00000009428	SAFB	93	84.895	ENSSARG00000010475	SAFB	100	85.246	Sorex_araneus
ENSPPYG00000009428	SAFB	87	59.348	ENSSPUG00000009747	-	99	58.374	Sphenodon_punctatus
ENSPPYG00000009428	SAFB	53	57.171	ENSSPUG00000009820	-	99	61.671	Sphenodon_punctatus
ENSPPYG00000009428	SAFB	93	41.609	ENSSPAG00000015682	safb	69	40.931	Stegastes_partitus
ENSPPYG00000009428	SAFB	100	92.880	ENSSSCG00000013522	SAFB	99	93.830	Sus_scrofa
ENSPPYG00000009428	SAFB	96	64.541	ENSTGUG00000000502	-	97	64.937	Taeniopygia_guttata
ENSPPYG00000009428	SAFB	93	61.889	ENSTGUG00000000489	-	97	64.554	Taeniopygia_guttata
ENSPPYG00000009428	SAFB	91	40.852	ENSTRUG00000003567	safb	95	42.265	Takifugu_rubripes
ENSPPYG00000009428	SAFB	88	44.591	ENSTNIG00000015470	safb	100	43.396	Tetraodon_nigroviridis
ENSPPYG00000009428	SAFB	74	82.707	ENSTBEG00000013124	-	66	90.226	Tupaia_belangeri
ENSPPYG00000009428	SAFB	92	98.413	ENSTTRG00000013588	SAFB	92	98.413	Tursiops_truncatus
ENSPPYG00000009428	SAFB	79	89.863	ENSUAMG00000024543	SAFB	100	85.550	Ursus_americanus
ENSPPYG00000009428	SAFB	89	91.162	ENSUMAG00000009734	SAFB	97	91.276	Ursus_maritimus
ENSPPYG00000009428	SAFB	73	95.312	ENSVPAG00000012043	SAFB	79	95.312	Vicugna_pacos
ENSPPYG00000009428	SAFB	100	93.355	ENSVVUG00000013720	SAFB	87	93.355	Vulpes_vulpes
ENSPPYG00000009428	SAFB	66	50.990	ENSXETG00000008755	safb	97	54.481	Xenopus_tropicalis
ENSPPYG00000009428	SAFB	95	38.957	ENSXMAG00000003458	safb	66	40.328	Xiphophorus_maculatus