EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPPYG00000009622 (Gene tree)
Gene ID: 100454032
Gene Symbol: TRMT1
Alias: FLJ20244|TRM1
Full Name: tRNA methyltransferase 1
Gene Type: protein_coding
Species: Pongo_abelii
Status: putative
Strand: Minus strand
Length: 13273 bases
Position: chr19:13327194-13340466
Accession: 100454032
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPPYP00000010786	zf-CCCH	PF00642.24	5e-07	1	1
ENSPPYP00000010786	TRM	PF02005.16	7.9e-151	1	1
ENSPPYP00000010786	Met_10	PF02475.16	1.6e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPPYT00000011208	TRMT1-201	2647	-	ENSPPYP00000010786	659 (aa)	XP_009251143	A0A2J8RXV7

Gene Model

Click here to download ENSPPYG00000009622's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPPYG00000009622's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPPYG00000009622	TRMT1	100	98.483	ENSG00000104907	TRMT1	100	98.953	Homo_sapiens
ENSPPYG00000009622	TRMT1	99	87.920	ENSAMEG00000012598	TRMT1	96	88.300	Ailuropoda_melanoleuca
ENSPPYG00000009622	TRMT1	87	59.337	ENSACIG00000018680	trmt1	88	59.408	Amphilophus_citrinellus
ENSPPYG00000009622	TRMT1	87	66.146	ENSAOCG00000006781	trmt1	86	66.146	Amphiprion_ocellaris
ENSPPYG00000009622	TRMT1	87	66.090	ENSAPEG00000007712	trmt1	86	66.149	Amphiprion_percula
ENSPPYG00000009622	TRMT1	87	68.118	ENSATEG00000001872	trmt1	84	68.118	Anabas_testudineus
ENSPPYG00000009622	TRMT1	88	68.158	ENSACAG00000003825	TRMT1	93	68.158	Anolis_carolinensis
ENSPPYG00000009622	TRMT1	98	90.447	ENSANAG00000023016	TRMT1	98	93.137	Aotus_nancymaae
ENSPPYG00000009622	TRMT1	87	64.974	ENSACLG00000010073	trmt1	92	64.974	Astatotilapia_calliptera
ENSPPYG00000009622	TRMT1	87	67.820	ENSAMXG00000012026	trmt1	85	67.820	Astyanax_mexicanus
ENSPPYG00000009622	TRMT1	99	87.481	ENSBTAG00000019325	TRMT1	91	88.006	Bos_taurus
ENSPPYG00000009622	TRMT1	80	40.296	WBGene00006613	trm-1	96	40.296	Caenorhabditis_elegans
ENSPPYG00000009622	TRMT1	98	89.985	ENSCJAG00000004566	TRMT1	99	90.217	Callithrix_jacchus
ENSPPYG00000009622	TRMT1	99	89.755	ENSCAFG00000017070	TRMT1	98	90.545	Canis_familiaris
ENSPPYG00000009622	TRMT1	98	89.147	ENSCAFG00020005397	TRMT1	97	86.271	Canis_lupus_dingo
ENSPPYG00000009622	TRMT1	99	87.348	ENSCHIG00000013569	TRMT1	97	87.714	Capra_hircus
ENSPPYG00000009622	TRMT1	97	84.961	ENSTSYG00000003207	TRMT1	98	84.961	Carlito_syrichta
ENSPPYG00000009622	TRMT1	85	80.927	ENSCAPG00000003355	TRMT1	97	81.295	Cavia_aperea
ENSPPYG00000009622	TRMT1	98	83.437	ENSCPOG00000011754	TRMT1	97	83.775	Cavia_porcellus
ENSPPYG00000009622	TRMT1	99	88.018	ENSCCAG00000022263	TRMT1	98	91.803	Cebus_capucinus
ENSPPYG00000009622	TRMT1	86	82.278	ENSCATG00000038220	-	97	80.597	Cercocebus_atys
ENSPPYG00000009622	TRMT1	99	96.177	ENSCATG00000039850	TRMT1	99	96.177	Cercocebus_atys
ENSPPYG00000009622	TRMT1	97	87.207	ENSCLAG00000015295	TRMT1	95	87.207	Chinchilla_lanigera
ENSPPYG00000009622	TRMT1	79	96.558	ENSCSAG00000006500	TRMT1	99	96.558	Chlorocebus_sabaeus
ENSPPYG00000009622	TRMT1	95	66.354	ENSCPBG00000023866	TRMT1	94	66.354	Chrysemys_picta_bellii
ENSPPYG00000009622	TRMT1	85	45.310	ENSCING00000002884	-	96	45.833	Ciona_intestinalis
ENSPPYG00000009622	TRMT1	83	45.848	ENSCSAVG00000010927	-	100	45.725	Ciona_savignyi
ENSPPYG00000009622	TRMT1	95	74.003	ENSCANG00000031650	-	96	74.003	Colobus_angolensis_palliatus
ENSPPYG00000009622	TRMT1	99	79.786	ENSCANG00000040631	TRMT1	97	79.844	Colobus_angolensis_palliatus
ENSPPYG00000009622	TRMT1	99	83.587	ENSCGRG00001022594	Trmt1	96	85.086	Cricetulus_griseus_chok1gshd
ENSPPYG00000009622	TRMT1	99	83.587	ENSCGRG00000017732	Trmt1	96	85.086	Cricetulus_griseus_crigri
ENSPPYG00000009622	TRMT1	87	66.899	ENSCSEG00000001643	trmt1	84	68.544	Cynoglossus_semilaevis
ENSPPYG00000009622	TRMT1	90	66.164	ENSCVAG00000011886	trmt1	89	66.164	Cyprinodon_variegatus
ENSPPYG00000009622	TRMT1	87	66.265	ENSDARG00000010978	trmt1	85	66.437	Danio_rerio
ENSPPYG00000009622	TRMT1	84	62.679	ENSDNOG00000048240	-	92	63.352	Dasypus_novemcinctus
ENSPPYG00000009622	TRMT1	99	85.106	ENSDORG00000014298	Trmt1	98	85.736	Dipodomys_ordii
ENSPPYG00000009622	TRMT1	79	47.358	FBgn0032430	CG6388	89	47.358	Drosophila_melanogaster
ENSPPYG00000009622	TRMT1	54	82.867	ENSETEG00000015483	-	52	82.867	Echinops_telfairi
ENSPPYG00000009622	TRMT1	78	53.801	ENSEBUG00000003449	trmt1	74	53.876	Eptatretus_burgeri
ENSPPYG00000009622	TRMT1	94	88.567	ENSEASG00005004050	TRMT1	97	88.567	Equus_asinus_asinus
ENSPPYG00000009622	TRMT1	94	88.889	ENSECAG00000016149	TRMT1	97	88.889	Equus_caballus
ENSPPYG00000009622	TRMT1	60	72.544	ENSEEUG00000014102	-	100	72.544	Erinaceus_europaeus
ENSPPYG00000009622	TRMT1	87	65.451	ENSELUG00000021659	trmt1	85	65.451	Esox_lucius
ENSPPYG00000009622	TRMT1	99	88.567	ENSFCAG00000000483	TRMT1	98	88.802	Felis_catus
ENSPPYG00000009622	TRMT1	99	84.251	ENSFDAG00000007386	TRMT1	96	85.423	Fukomys_damarensis
ENSPPYG00000009622	TRMT1	81	68.148	ENSFHEG00000012865	trmt1	90	68.022	Fundulus_heteroclitus
ENSPPYG00000009622	TRMT1	87	61.150	ENSGMOG00000006564	trmt1	98	61.672	Gadus_morhua
ENSPPYG00000009622	TRMT1	87	67.888	ENSGAFG00000011862	trmt1	88	68.063	Gambusia_affinis
ENSPPYG00000009622	TRMT1	88	63.311	ENSGACG00000000227	trmt1	94	63.714	Gasterosteus_aculeatus
ENSPPYG00000009622	TRMT1	91	68.333	ENSGAGG00000016432	TRMT1	86	69.336	Gopherus_agassizii
ENSPPYG00000009622	TRMT1	100	98.786	ENSGGOG00000014007	TRMT1	100	98.786	Gorilla_gorilla
ENSPPYG00000009622	TRMT1	88	57.904	ENSHBUG00000008821	trmt1	95	57.904	Haplochromis_burtoni
ENSPPYG00000009622	TRMT1	99	85.846	ENSHGLG00000015972	TRMT1	97	86.271	Heterocephalus_glaber_female
ENSPPYG00000009622	TRMT1	99	79.877	ENSHGLG00100018112	TRMT1	97	80.218	Heterocephalus_glaber_male
ENSPPYG00000009622	TRMT1	87	63.351	ENSHCOG00000009447	trmt1	88	63.415	Hippocampus_comes
ENSPPYG00000009622	TRMT1	92	61.194	ENSIPUG00000002899	trmt1	85	66.096	Ictalurus_punctatus
ENSPPYG00000009622	TRMT1	99	88.872	ENSSTOG00000012531	TRMT1	96	90.256	Ictidomys_tridecemlineatus
ENSPPYG00000009622	TRMT1	94	85.806	ENSJJAG00000017154	Trmt1	95	85.103	Jaculus_jaculus
ENSPPYG00000009622	TRMT1	87	68.301	ENSKMAG00000011809	trmt1	95	67.426	Kryptolebias_marmoratus
ENSPPYG00000009622	TRMT1	87	66.725	ENSLBEG00000012703	trmt1	84	66.725	Labrus_bergylta
ENSPPYG00000009622	TRMT1	87	57.315	ENSLACG00000014585	TRMT1	94	57.315	Latimeria_chalumnae
ENSPPYG00000009622	TRMT1	73	71.102	ENSLOCG00000006479	trmt1	97	63.621	Lepisosteus_oculatus
ENSPPYG00000009622	TRMT1	98	88.854	ENSLAFG00000014072	TRMT1	97	90.317	Loxodonta_africana
ENSPPYG00000009622	TRMT1	99	96.330	ENSMFAG00000033143	TRMT1	99	96.330	Macaca_fascicularis
ENSPPYG00000009622	TRMT1	99	89.482	ENSMMUG00000001167	TRMT1	98	89.736	Macaca_mulatta
ENSPPYG00000009622	TRMT1	99	96.177	ENSMNEG00000037867	TRMT1	99	96.177	Macaca_nemestrina
ENSPPYG00000009622	TRMT1	100	95.599	ENSMLEG00000016142	TRMT1	98	95.975	Mandrillus_leucophaeus
ENSPPYG00000009622	TRMT1	87	68.063	ENSMAMG00000004357	trmt1	85	68.063	Mastacembelus_armatus
ENSPPYG00000009622	TRMT1	87	65.499	ENSMZEG00005014510	trmt1	92	62.561	Maylandia_zebra
ENSPPYG00000009622	TRMT1	97	83.515	ENSMAUG00000011134	Trmt1	97	83.489	Mesocricetus_auratus
ENSPPYG00000009622	TRMT1	99	92.202	ENSMICG00000000793	TRMT1	97	92.200	Microcebus_murinus
ENSPPYG00000009622	TRMT1	98	84.317	ENSMOCG00000015895	Trmt1	96	84.555	Microtus_ochrogaster
ENSPPYG00000009622	TRMT1	87	65.734	ENSMMOG00000011097	trmt1	92	65.734	Mola_mola
ENSPPYG00000009622	TRMT1	92	76.403	ENSMODG00000011619	TRMT1	98	76.403	Monodelphis_domestica
ENSPPYG00000009622	TRMT1	99	83.763	MGP_CAROLIEiJ_G0031304	Trmt1	96	85.238	Mus_caroli
ENSPPYG00000009622	TRMT1	99	83.460	ENSMUSG00000001909	Trmt1	96	84.762	Mus_musculus
ENSPPYG00000009622	TRMT1	99	83.308	MGP_SPRETEiJ_G0032422	Trmt1	96	84.762	Mus_spretus
ENSPPYG00000009622	TRMT1	99	88.550	ENSMPUG00000004210	TRMT1	92	88.785	Mustela_putorius_furo
ENSPPYG00000009622	TRMT1	99	88.244	ENSMLUG00000012809	TRMT1	96	88.768	Myotis_lucifugus
ENSPPYG00000009622	TRMT1	98	84.853	ENSNGAG00000022486	Trmt1	96	85.489	Nannospalax_galili
ENSPPYG00000009622	TRMT1	75	69.254	ENSNBRG00000024376	trmt1	85	69.254	Neolamprologus_brichardi
ENSPPYG00000009622	TRMT1	82	96.512	ENSNLEG00000013019	-	100	96.512	Nomascus_leucogenys
ENSPPYG00000009622	TRMT1	91	77.258	ENSMEUG00000013756	TRMT1	100	77.258	Notamacropus_eugenii
ENSPPYG00000009622	TRMT1	83	86.937	ENSOPRG00000009471	-	80	89.858	Ochotona_princeps
ENSPPYG00000009622	TRMT1	98	86.491	ENSODEG00000010323	TRMT1	97	86.583	Octodon_degus
ENSPPYG00000009622	TRMT1	95	64.640	ENSONIG00000000400	trmt1	99	64.640	Oreochromis_niloticus
ENSPPYG00000009622	TRMT1	80	89.015	ENSOCUG00000021934	TRMT1	99	89.015	Oryctolagus_cuniculus
ENSPPYG00000009622	TRMT1	87	62.803	ENSORLG00000020074	trmt1	90	62.803	Oryzias_latipes
ENSPPYG00000009622	TRMT1	87	65.674	ENSORLG00020007561	trmt1	89	65.674	Oryzias_latipes_hni
ENSPPYG00000009622	TRMT1	87	65.849	ENSORLG00015006547	trmt1	86	65.849	Oryzias_latipes_hsok
ENSPPYG00000009622	TRMT1	87	66.025	ENSOMEG00000019343	trmt1	86	66.025	Oryzias_melastigma
ENSPPYG00000009622	TRMT1	95	87.342	ENSOGAG00000025576	TRMT1	99	87.500	Otolemur_garnettii
ENSPPYG00000009622	TRMT1	99	72.079	ENSOARG00000009397	TRMT1	91	72.291	Ovis_aries
ENSPPYG00000009622	TRMT1	98	80.154	ENSPPRG00000012117	TRMT1	98	80.377	Panthera_pardus
ENSPPYG00000009622	TRMT1	77	89.970	ENSPTIG00000008833	TRMT1	94	89.970	Panthera_tigris_altaica
ENSPPYG00000009622	TRMT1	99	72.197	ENSPTRG00000050421	-	97	71.900	Pan_troglodytes
ENSPPYG00000009622	TRMT1	100	98.634	ENSPTRG00000010557	TRMT1	100	98.634	Pan_troglodytes
ENSPPYG00000009622	TRMT1	99	96.483	ENSPANG00000009247	TRMT1	99	96.483	Papio_anubis
ENSPPYG00000009622	TRMT1	85	78.481	ENSPANG00000034058	-	94	78.243	Papio_anubis
ENSPPYG00000009622	TRMT1	87	68.348	ENSPKIG00000005309	trmt1	84	68.348	Paramormyrops_kingsleyae
ENSPPYG00000009622	TRMT1	85	60.284	ENSPSIG00000008762	TRMT1	80	60.284	Pelodiscus_sinensis
ENSPPYG00000009622	TRMT1	87	66.028	ENSPMGG00000019764	trmt1	90	66.087	Periophthalmus_magnuspinnatus
ENSPPYG00000009622	TRMT1	97	86.385	ENSPEMG00000016247	Trmt1	96	86.385	Peromyscus_maniculatus_bairdii
ENSPPYG00000009622	TRMT1	94	57.327	ENSPMAG00000004329	trmt1	96	57.327	Petromyzon_marinus
ENSPPYG00000009622	TRMT1	96	74.727	ENSPCIG00000019273	TRMT1	99	74.727	Phascolarctos_cinereus
ENSPPYG00000009622	TRMT1	87	69.459	ENSPFOG00000008527	trmt1	88	69.459	Poecilia_formosa
ENSPPYG00000009622	TRMT1	87	69.284	ENSPLAG00000018788	trmt1	87	71.815	Poecilia_latipinna
ENSPPYG00000009622	TRMT1	87	69.284	ENSPMEG00000013120	trmt1	88	69.284	Poecilia_mexicana
ENSPPYG00000009622	TRMT1	87	68.063	ENSPREG00000000211	trmt1	85	68.237	Poecilia_reticulata
ENSPPYG00000009622	TRMT1	98	80.093	ENSPCAG00000003698	TRMT1	98	80.249	Procavia_capensis
ENSPPYG00000009622	TRMT1	99	92.226	ENSPCOG00000008653	TRMT1	98	92.535	Propithecus_coquereli
ENSPPYG00000009622	TRMT1	99	89.008	ENSPVAG00000015076	TRMT1	98	89.252	Pteropus_vampyrus
ENSPPYG00000009622	TRMT1	87	63.923	ENSPNYG00000013960	trmt1	92	63.923	Pundamilia_nyererei
ENSPPYG00000009622	TRMT1	81	68.607	ENSPNAG00000024859	trmt1	88	68.607	Pygocentrus_nattereri
ENSPPYG00000009622	TRMT1	95	84.360	ENSRNOG00000002914	Trmt1	96	85.691	Rattus_norvegicus
ENSPPYG00000009622	TRMT1	95	74.563	ENSRBIG00000037505	-	97	74.563	Rhinopithecus_bieti
ENSPPYG00000009622	TRMT1	99	96.177	ENSRBIG00000038324	TRMT1	97	96.568	Rhinopithecus_bieti
ENSPPYG00000009622	TRMT1	95	73.768	ENSRROG00000031847	-	96	73.768	Rhinopithecus_roxellana
ENSPPYG00000009622	TRMT1	99	96.024	ENSRROG00000028599	TRMT1	97	96.412	Rhinopithecus_roxellana
ENSPPYG00000009622	TRMT1	79	36.661	YDR120C	-	94	36.661	Saccharomyces_cerevisiae
ENSPPYG00000009622	TRMT1	99	88.940	ENSSBOG00000028861	TRMT1	98	91.475	Saimiri_boliviensis_boliviensis
ENSPPYG00000009622	TRMT1	89	78.024	ENSSHAG00000014381	TRMT1	98	76.596	Sarcophilus_harrisii
ENSPPYG00000009622	TRMT1	87	68.118	ENSSFOG00015004139	trmt1	84	68.118	Scleropages_formosus
ENSPPYG00000009622	TRMT1	87	67.304	ENSSMAG00000021136	trmt1	85	67.304	Scophthalmus_maximus
ENSPPYG00000009622	TRMT1	87	67.483	ENSSDUG00000012740	trmt1	84	67.539	Seriola_dumerili
ENSPPYG00000009622	TRMT1	87	67.308	ENSSLDG00000005971	trmt1	84	67.365	Seriola_lalandi_dorsalis
ENSPPYG00000009622	TRMT1	85	84.752	ENSSARG00000005138	TRMT1	99	84.752	Sorex_araneus
ENSPPYG00000009622	TRMT1	88	54.452	ENSSPUG00000001084	TRMT1	91	54.795	Sphenodon_punctatus
ENSPPYG00000009622	TRMT1	91	63.394	ENSSPAG00000007153	trmt1	98	63.394	Stegastes_partitus
ENSPPYG00000009622	TRMT1	97	89.969	ENSSSCG00000013744	TRMT1	98	90.240	Sus_scrofa
ENSPPYG00000009622	TRMT1	86	63.258	ENSTRUG00000010700	trmt1	86	63.432	Takifugu_rubripes
ENSPPYG00000009622	TRMT1	87	66.492	ENSTNIG00000018808	trmt1	98	66.551	Tetraodon_nigroviridis
ENSPPYG00000009622	TRMT1	98	86.068	ENSTTRG00000006379	TRMT1	98	86.003	Tursiops_truncatus
ENSPPYG00000009622	TRMT1	99	87.865	ENSUAMG00000022911	TRMT1	98	88.088	Ursus_americanus
ENSPPYG00000009622	TRMT1	97	88.069	ENSUMAG00000006027	TRMT1	98	88.301	Ursus_maritimus
ENSPPYG00000009622	TRMT1	99	89.755	ENSVVUG00000024177	TRMT1	97	90.016	Vulpes_vulpes
ENSPPYG00000009622	TRMT1	70	71.800	ENSXETG00000033863	TRMT1	92	71.800	Xenopus_tropicalis
ENSPPYG00000009622	TRMT1	90	66.221	ENSXCOG00000015733	trmt1	92	66.388	Xiphophorus_couchianus
ENSPPYG00000009622	TRMT1	87	67.882	ENSXMAG00000013823	trmt1	98	68.056	Xiphophorus_maculatus