EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPPYG00000009871 (Gene tree)
Gene ID: -
Gene Symbol: RBM42
Alias: MGC10433
Full Name: RNA binding motif protein 42
Gene Type: protein_coding
Species: Pongo_abelii
Status: putative
Strand: Plus strand
Length: 9634 bases
Position: chr19:36432771-36442404
Accession: 100437104
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPPYP00000011051	RRM_1	PF00076.22	5.1e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPPYT00000011483	RBM42-201	1807	XM_002829075	ENSPPYP00000011051	485 (aa)	XP_002829121	H2NYH0

Gene Model

Click here to download ENSPPYG00000009871's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPPYG00000009871's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPPYG00000009871	RBM42	100	98.969	ENSG00000126254	RBM42	100	100.000	Homo_sapiens
ENSPPYG00000009871	RBM42	100	96.715	ENSAMEG00000000524	RBM42	100	96.715	Ailuropoda_melanoleuca
ENSPPYG00000009871	RBM42	100	97.526	ENSANAG00000027537	RBM42	100	100.000	Aotus_nancymaae
ENSPPYG00000009871	RBM42	100	97.113	ENSBTAG00000013440	RBM42	100	97.113	Bos_taurus
ENSPPYG00000009871	RBM42	100	96.495	ENSCJAG00000010220	RBM42	100	100.000	Callithrix_jacchus
ENSPPYG00000009871	RBM42	100	88.866	ENSCAFG00020018628	RBM42	96	100.000	Canis_lupus_dingo
ENSPPYG00000009871	RBM42	100	96.495	ENSCHIG00000009518	RBM42	100	96.495	Capra_hircus
ENSPPYG00000009871	RBM42	100	97.320	ENSTSYG00000014688	RBM42	100	100.000	Carlito_syrichta
ENSPPYG00000009871	RBM42	80	97.938	ENSCAPG00000009566	RBM42	99	97.938	Cavia_aperea
ENSPPYG00000009871	RBM42	100	96.701	ENSCPOG00000012365	RBM42	99	96.701	Cavia_porcellus
ENSPPYG00000009871	RBM42	100	98.144	ENSCCAG00000034440	RBM42	100	100.000	Cebus_capucinus
ENSPPYG00000009871	RBM42	100	98.763	ENSCATG00000041924	RBM42	100	100.000	Cercocebus_atys
ENSPPYG00000009871	RBM42	100	96.082	ENSCLAG00000012865	RBM42	99	96.082	Chinchilla_lanigera
ENSPPYG00000009871	RBM42	100	90.928	ENSCSAG00000004422	RBM42	100	89.485	Chlorocebus_sabaeus
ENSPPYG00000009871	RBM42	100	83.711	ENSCANG00000030272	RBM42	100	82.887	Colobus_angolensis_palliatus
ENSPPYG00000009871	RBM42	100	95.670	ENSCGRG00001018540	Rbm42	99	95.670	Cricetulus_griseus_chok1gshd
ENSPPYG00000009871	RBM42	100	96.708	ENSDNOG00000037397	RBM42	100	96.708	Dasypus_novemcinctus
ENSPPYG00000009871	RBM42	100	95.670	ENSDORG00000013001	Rbm42	99	95.670	Dipodomys_ordii
ENSPPYG00000009871	RBM42	70	92.754	ENSETEG00000007878	RBM42	71	92.857	Echinops_telfairi
ENSPPYG00000009871	RBM42	100	89.485	ENSEASG00005001074	RBM42	100	87.423	Equus_asinus_asinus
ENSPPYG00000009871	RBM42	100	89.485	ENSECAG00000018215	RBM42	100	87.423	Equus_caballus
ENSPPYG00000009871	RBM42	100	97.113	ENSFCAG00000006376	RBM42	100	100.000	Felis_catus
ENSPPYG00000009871	RBM42	100	95.876	ENSFDAG00000007440	RBM42	99	95.876	Fukomys_damarensis
ENSPPYG00000009871	RBM42	100	98.969	ENSGGOG00000009972	RBM42	100	100.000	Gorilla_gorilla
ENSPPYG00000009871	RBM42	100	94.227	ENSHGLG00000008418	RBM42	99	94.227	Heterocephalus_glaber_female
ENSPPYG00000009871	RBM42	100	94.227	ENSHGLG00100018667	RBM42	99	94.227	Heterocephalus_glaber_male
ENSPPYG00000009871	RBM42	100	95.876	ENSSTOG00000013050	RBM42	100	95.876	Ictidomys_tridecemlineatus
ENSPPYG00000009871	RBM42	100	95.052	ENSJJAG00000010421	Rbm42	99	95.052	Jaculus_jaculus
ENSPPYG00000009871	RBM42	98	93.277	ENSLAFG00000014993	RBM42	99	90.515	Loxodonta_africana
ENSPPYG00000009871	RBM42	100	98.763	ENSMFAG00000002758	RBM42	100	100.000	Macaca_fascicularis
ENSPPYG00000009871	RBM42	100	98.763	ENSMMUG00000018954	RBM42	100	100.000	Macaca_mulatta
ENSPPYG00000009871	RBM42	100	98.763	ENSMNEG00000030009	RBM42	100	100.000	Macaca_nemestrina
ENSPPYG00000009871	RBM42	100	98.763	ENSMLEG00000036119	RBM42	100	100.000	Mandrillus_leucophaeus
ENSPPYG00000009871	RBM42	100	97.732	ENSMICG00000009880	RBM42	100	100.000	Microcebus_murinus
ENSPPYG00000009871	RBM42	100	95.464	ENSMOCG00000000405	Rbm42	99	95.464	Microtus_ochrogaster
ENSPPYG00000009871	RBM42	100	96.082	MGP_CAROLIEiJ_G0029536	Rbm42	99	96.082	Mus_caroli
ENSPPYG00000009871	RBM42	100	96.082	ENSMUSG00000036733	Rbm42	99	96.082	Mus_musculus
ENSPPYG00000009871	RBM42	100	96.082	MGP_PahariEiJ_G0012770	Rbm42	99	96.082	Mus_pahari
ENSPPYG00000009871	RBM42	100	96.082	MGP_SPRETEiJ_G0030632	Rbm42	99	96.082	Mus_spretus
ENSPPYG00000009871	RBM42	100	89.691	ENSMPUG00000006288	RBM42	100	87.835	Mustela_putorius_furo
ENSPPYG00000009871	RBM42	100	95.670	ENSMLUG00000011334	RBM42	100	95.670	Myotis_lucifugus
ENSPPYG00000009871	RBM42	100	95.258	ENSNGAG00000019698	Rbm42	99	95.258	Nannospalax_galili
ENSPPYG00000009871	RBM42	69	96.429	ENSNLEG00000011272	-	94	91.944	Nomascus_leucogenys
ENSPPYG00000009871	RBM42	96	81.489	ENSMEUG00000016300	RBM42	100	82.449	Notamacropus_eugenii
ENSPPYG00000009871	RBM42	100	93.196	ENSOPRG00000001229	RBM42	100	86.598	Ochotona_princeps
ENSPPYG00000009871	RBM42	100	96.289	ENSODEG00000013705	RBM42	99	96.289	Octodon_degus
ENSPPYG00000009871	RBM42	100	91.546	ENSOCUG00000003337	RBM42	100	89.072	Oryctolagus_cuniculus
ENSPPYG00000009871	RBM42	100	96.289	ENSOGAG00000004144	RBM42	100	96.289	Otolemur_garnettii
ENSPPYG00000009871	RBM42	100	98.144	ENSPPAG00000037315	RBM42	100	100.000	Pan_paniscus
ENSPPYG00000009871	RBM42	100	97.113	ENSPPRG00000016784	RBM42	100	100.000	Panthera_pardus
ENSPPYG00000009871	RBM42	100	96.701	ENSPTIG00000019270	RBM42	100	100.000	Panthera_tigris_altaica
ENSPPYG00000009871	RBM42	100	98.969	ENSPTRG00000010852	RBM42	100	100.000	Pan_troglodytes
ENSPPYG00000009871	RBM42	100	97.113	ENSPANG00000017032	RBM42	100	100.000	Papio_anubis
ENSPPYG00000009871	RBM42	100	96.495	ENSPEMG00000012065	Rbm42	99	96.495	Peromyscus_maniculatus_bairdii
ENSPPYG00000009871	RBM42	100	83.711	ENSPCAG00000013053	RBM42	100	83.711	Procavia_capensis
ENSPPYG00000009871	RBM42	69	98.507	ENSPCOG00000020672	RBM42	81	98.507	Propithecus_coquereli
ENSPPYG00000009871	RBM42	100	97.732	ENSPCOG00000026433	-	100	100.000	Propithecus_coquereli
ENSPPYG00000009871	RBM42	100	96.701	ENSPVAG00000012815	RBM42	100	96.701	Pteropus_vampyrus
ENSPPYG00000009871	RBM42	100	96.289	ENSRNOG00000024278	Rbm42	99	96.289	Rattus_norvegicus
ENSPPYG00000009871	RBM42	100	98.763	ENSRBIG00000007566	RBM42	100	100.000	Rhinopithecus_bieti
ENSPPYG00000009871	RBM42	100	98.144	ENSRROG00000042313	RBM42	100	100.000	Rhinopithecus_roxellana
ENSPPYG00000009871	RBM42	84	99.265	ENSSBOG00000030666	RBM42	100	99.265	Saimiri_boliviensis_boliviensis
ENSPPYG00000009871	RBM42	100	86.804	ENSSARG00000010724	RBM42	100	86.804	Sorex_araneus
ENSPPYG00000009871	RBM42	100	96.289	ENSSSCG00000002905	RBM42	100	96.289	Sus_scrofa
ENSPPYG00000009871	RBM42	100	96.907	ENSUAMG00000020711	RBM42	100	96.907	Ursus_americanus
ENSPPYG00000009871	RBM42	100	96.907	ENSUMAG00000020223	RBM42	100	96.907	Ursus_maritimus
ENSPPYG00000009871	RBM42	100	95.670	ENSVVUG00000015117	RBM42	100	95.670	Vulpes_vulpes