EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPPYG00000011016 (Gene tree)
Gene ID: -
Gene Symbol: CHD6
Alias: CHD5|FLJ22369|KIAA1335|RIGB|dJ620E11.1
Full Name: chromodomain helicase DNA binding protein 6
Gene Type: protein_coding
Species: Pongo_abelii
Status: putative
Strand: Minus strand
Length: 227432 bases
Position: chr20:38701695-38929126
Accession: 100453188
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPPYP00000012304	ResIII	PF04851.15	5.4e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPPYT00000012785	CHD6-201	10807	XM_024238849	ENSPPYP00000012304	2717 (aa)	XP_024094617	H2P1Y6

Gene Model

Click here to download ENSPPYG00000011016's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPPYG00000011016's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPPYG00000011016	CHD6	79	62.813	ENSPPYG00000007348	CHD9	72	62.872
ENSPPYG00000011016	CHD6	62	61.606	ENSPPYG00000005596	CHD8	63	62.973
ENSPPYG00000011016	CHD6	73	68.714	ENSPPYG00000018618	CHD7	71	65.443

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPPYG00000011016	CHD6	100	99.227	ENSG00000124177	CHD6	100	99.329	Homo_sapiens
ENSPPYG00000011016	CHD6	77	71.306	ENSAPOG00000013736	chd6	67	72.336	Acanthochromis_polyacanthus
ENSPPYG00000011016	CHD6	100	91.771	ENSAMEG00000009496	CHD6	100	91.771	Ailuropoda_melanoleuca
ENSPPYG00000011016	CHD6	74	75.464	ENSATEG00000005608	chd6	62	77.395	Anabas_testudineus
ENSPPYG00000011016	CHD6	68	78.522	ENSAPLG00000015592	CHD6	100	72.253	Anas_platyrhynchos
ENSPPYG00000011016	CHD6	96	72.867	ENSACAG00000006842	CHD6	97	73.927	Anolis_carolinensis
ENSPPYG00000011016	CHD6	100	97.056	ENSANAG00000037548	CHD6	100	97.056	Aotus_nancymaae
ENSPPYG00000011016	CHD6	77	73.963	ENSAMXG00000009576	chd6	77	69.642	Astyanax_mexicanus
ENSPPYG00000011016	CHD6	100	88.587	ENSBTAG00000005733	CHD6	100	88.587	Bos_taurus
ENSPPYG00000011016	CHD6	100	96.872	ENSCJAG00000017920	CHD6	100	96.872	Callithrix_jacchus
ENSPPYG00000011016	CHD6	100	91.807	ENSCAFG00000009236	CHD6	100	91.734	Canis_familiaris
ENSPPYG00000011016	CHD6	99	91.221	ENSCAFG00020012906	CHD6	99	97.463	Canis_lupus_dingo
ENSPPYG00000011016	CHD6	100	88.734	ENSCHIG00000017606	CHD6	100	88.734	Capra_hircus
ENSPPYG00000011016	CHD6	84	93.158	ENSTSYG00000014635	CHD6	100	93.158	Carlito_syrichta
ENSPPYG00000011016	CHD6	100	91.624	ENSCPOG00000015641	CHD6	100	91.624	Cavia_porcellus
ENSPPYG00000011016	CHD6	100	97.313	ENSCCAG00000036828	CHD6	100	97.313	Cebus_capucinus
ENSPPYG00000011016	CHD6	100	98.013	ENSCATG00000039248	CHD6	100	98.013	Cercocebus_atys
ENSPPYG00000011016	CHD6	100	91.569	ENSCLAG00000013743	CHD6	100	91.569	Chinchilla_lanigera
ENSPPYG00000011016	CHD6	100	98.381	ENSCSAG00000013997	CHD6	100	98.381	Chlorocebus_sabaeus
ENSPPYG00000011016	CHD6	91	89.789	ENSCHOG00000012647	CHD6	95	89.789	Choloepus_hoffmanni
ENSPPYG00000011016	CHD6	99	73.115	ENSCPBG00000019382	CHD6	99	73.867	Chrysemys_picta_bellii
ENSPPYG00000011016	CHD6	100	98.344	ENSCANG00000043435	CHD6	100	98.344	Colobus_angolensis_palliatus
ENSPPYG00000011016	CHD6	100	89.456	ENSCGRG00001002694	Chd6	100	89.493	Cricetulus_griseus_chok1gshd
ENSPPYG00000011016	CHD6	82	73.678	ENSDARG00000017244	chd6	79	73.678	Danio_rerio
ENSPPYG00000011016	CHD6	99	90.973	ENSDNOG00000004176	CHD6	99	90.973	Dasypus_novemcinctus
ENSPPYG00000011016	CHD6	99	92.464	ENSEASG00005023433	CHD6	95	97.876	Equus_asinus_asinus
ENSPPYG00000011016	CHD6	99	93.088	ENSECAG00000011761	CHD6	100	93.088	Equus_caballus
ENSPPYG00000011016	CHD6	72	79.740	ENSELUG00000012309	chd6	92	79.740	Esox_lucius
ENSPPYG00000011016	CHD6	100	91.991	ENSFCAG00000003572	CHD6	100	91.991	Felis_catus
ENSPPYG00000011016	CHD6	99	70.850	ENSFALG00000012563	CHD6	98	71.144	Ficedula_albicollis
ENSPPYG00000011016	CHD6	99	91.928	ENSFDAG00000013791	CHD6	99	91.928	Fukomys_damarensis
ENSPPYG00000011016	CHD6	73	69.550	ENSGMOG00000011715	chd6	85	69.693	Gadus_morhua
ENSPPYG00000011016	CHD6	78	69.910	ENSGACG00000000037	chd6	99	54.600	Gasterosteus_aculeatus
ENSPPYG00000011016	CHD6	100	99.190	ENSGGOG00000013123	CHD6	100	99.190	Gorilla_gorilla
ENSPPYG00000011016	CHD6	77	72.226	ENSHBUG00000014701	chd6	65	73.419	Haplochromis_burtoni
ENSPPYG00000011016	CHD6	100	91.994	ENSHGLG00000004548	CHD6	100	92.031	Heterocephalus_glaber_female
ENSPPYG00000011016	CHD6	100	91.994	ENSHGLG00100006401	CHD6	100	92.031	Heterocephalus_glaber_male
ENSPPYG00000011016	CHD6	77	77.703	ENSIPUG00000003692	chd6	74	76.451	Ictalurus_punctatus
ENSPPYG00000011016	CHD6	100	92.579	ENSSTOG00000013382	CHD6	100	92.579	Ictidomys_tridecemlineatus
ENSPPYG00000011016	CHD6	87	76.278	ENSLACG00000010881	CHD6	87	76.221	Latimeria_chalumnae
ENSPPYG00000011016	CHD6	73	80.340	ENSLOCG00000007386	chd6	84	75.604	Lepisosteus_oculatus
ENSPPYG00000011016	CHD6	100	92.178	ENSLAFG00000012144	CHD6	100	92.178	Loxodonta_africana
ENSPPYG00000011016	CHD6	100	98.417	ENSMFAG00000032830	CHD6	100	98.417	Macaca_fascicularis
ENSPPYG00000011016	CHD6	100	98.417	ENSMMUG00000020458	CHD6	100	98.417	Macaca_mulatta
ENSPPYG00000011016	CHD6	100	98.417	ENSMNEG00000040847	CHD6	100	98.417	Macaca_nemestrina
ENSPPYG00000011016	CHD6	99	98.411	ENSMLEG00000031965	CHD6	100	98.374	Mandrillus_leucophaeus
ENSPPYG00000011016	CHD6	74	73.482	ENSMAMG00000013111	chd6	62	77.310	Mastacembelus_armatus
ENSPPYG00000011016	CHD6	99	71.069	ENSMGAG00000001121	CHD6	100	71.772	Meleagris_gallopavo
ENSPPYG00000011016	CHD6	99	94.198	ENSMICG00000016641	CHD6	99	94.198	Microcebus_murinus
ENSPPYG00000011016	CHD6	89	81.271	ENSMODG00000000720	-	99	81.271	Monodelphis_domestica
ENSPPYG00000011016	CHD6	100	88.024	MGP_CAROLIEiJ_G0024604	Chd6	100	94.599	Mus_caroli
ENSPPYG00000011016	CHD6	100	88.207	ENSMUSG00000057133	Chd6	100	94.515	Mus_musculus
ENSPPYG00000011016	CHD6	100	87.987	MGP_PahariEiJ_G0026048	Chd6	100	94.937	Mus_pahari
ENSPPYG00000011016	CHD6	100	88.244	MGP_SPRETEiJ_G0025526	Chd6	100	94.599	Mus_spretus
ENSPPYG00000011016	CHD6	100	90.363	ENSMPUG00000017695	CHD6	100	90.326	Mustela_putorius_furo
ENSPPYG00000011016	CHD6	100	91.587	ENSMLUG00000016247	CHD6	100	91.587	Myotis_lucifugus
ENSPPYG00000011016	CHD6	78	73.172	ENSNBRG00000013839	chd6	79	72.244	Neolamprologus_brichardi
ENSPPYG00000011016	CHD6	99	97.339	ENSNLEG00000006496	CHD6	99	97.339	Nomascus_leucogenys
ENSPPYG00000011016	CHD6	100	87.693	ENSOPRG00000013376	-	100	87.693	Ochotona_princeps
ENSPPYG00000011016	CHD6	85	74.121	ENSONIG00000000393	chd6	88	73.585	Oreochromis_niloticus
ENSPPYG00000011016	CHD6	99	70.170	ENSOANG00000014347	CHD6	99	70.301	Ornithorhynchus_anatinus
ENSPPYG00000011016	CHD6	99	89.816	ENSOCUG00000012394	CHD6	100	89.816	Oryctolagus_cuniculus
ENSPPYG00000011016	CHD6	80	70.104	ENSORLG00020021891	chd6	95	85.972	Oryzias_latipes_hni
ENSPPYG00000011016	CHD6	99	92.003	ENSOGAG00000002427	CHD6	100	91.792	Otolemur_garnettii
ENSPPYG00000011016	CHD6	99	86.485	ENSOARG00000002597	CHD6	100	86.522	Ovis_aries
ENSPPYG00000011016	CHD6	100	92.101	ENSPPRG00000014756	CHD6	100	92.101	Panthera_pardus
ENSPPYG00000011016	CHD6	100	91.991	ENSPTIG00000011094	CHD6	100	91.991	Panthera_tigris_altaica
ENSPPYG00000011016	CHD6	100	99.264	ENSPTRG00000013504	CHD6	100	99.264	Pan_troglodytes
ENSPPYG00000011016	CHD6	100	98.381	ENSPANG00000025554	CHD6	100	98.381	Papio_anubis
ENSPPYG00000011016	CHD6	78	75.855	ENSPKIG00000005578	chd6	79	72.458	Paramormyrops_kingsleyae
ENSPPYG00000011016	CHD6	75	76.458	ENSPMGG00000014877	chd6	86	76.671	Periophthalmus_magnuspinnatus
ENSPPYG00000011016	CHD6	100	80.469	ENSPCIG00000028037	CHD6	100	80.982	Phascolarctos_cinereus
ENSPPYG00000011016	CHD6	78	70.402	ENSPLAG00000003128	chd6	68	72.983	Poecilia_latipinna
ENSPPYG00000011016	CHD6	75	71.875	ENSPREG00000022653	chd6	99	86.447	Poecilia_reticulata
ENSPPYG00000011016	CHD6	99	93.736	ENSPCOG00000001089	CHD6	99	93.736	Propithecus_coquereli
ENSPPYG00000011016	CHD6	78	74.821	ENSPNYG00000022516	chd6	78	74.014	Pundamilia_nyererei
ENSPPYG00000011016	CHD6	81	71.092	ENSPNAG00000012825	chd6	79	70.542	Pygocentrus_nattereri
ENSPPYG00000011016	CHD6	100	87.583	ENSRNOG00000016744	Chd6	100	87.509	Rattus_norvegicus
ENSPPYG00000011016	CHD6	100	97.056	ENSSBOG00000022089	CHD6	100	97.056	Saimiri_boliviensis_boliviensis
ENSPPYG00000011016	CHD6	100	79.956	ENSSHAG00000017072	CHD6	100	80.469	Sarcophilus_harrisii
ENSPPYG00000011016	CHD6	78	76.187	ENSSFOG00015012920	chd6	81	72.904	Scleropages_formosus
ENSPPYG00000011016	CHD6	59	99.342	ENSSARG00000002615	-	61	99.342	Sorex_araneus
ENSPPYG00000011016	CHD6	100	90.856	ENSSSCG00000007360	CHD6	100	91.850	Sus_scrofa
ENSPPYG00000011016	CHD6	66	79.721	ENSTGUG00000003179	CHD6	69	80.011	Taeniopygia_guttata
ENSPPYG00000011016	CHD6	51	77.445	ENSTNIG00000017487	chd6	100	57.387	Tetraodon_nigroviridis
ENSPPYG00000011016	CHD6	100	88.367	ENSTTRG00000013438	CHD6	100	88.367	Tursiops_truncatus
ENSPPYG00000011016	CHD6	99	90.778	ENSUAMG00000024036	CHD6	95	96.332	Ursus_americanus
ENSPPYG00000011016	CHD6	99	92.177	ENSUMAG00000002017	CHD6	95	96.332	Ursus_maritimus
ENSPPYG00000011016	CHD6	94	89.733	ENSVPAG00000007941	CHD6	95	89.802	Vicugna_pacos
ENSPPYG00000011016	CHD6	100	91.918	ENSVVUG00000029164	CHD6	100	91.918	Vulpes_vulpes
ENSPPYG00000011016	CHD6	82	73.007	ENSXETG00000021445	chd6	90	69.675	Xenopus_tropicalis