EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPPYG00000011019 (Gene tree)
Gene ID: 100455023
Gene Symbol: SRSF6
Alias: -
Full Name: serine and arginine rich splicing factor 6
Gene Type: protein_coding
Species: Pongo_abelii
Status: putative
Strand: Plus strand
Length: 7427 bases
Position: chr20:40819669-40827095
Accession: 100455023
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPPYP00000012307	RRM_1	PF00076.22	7.5e-33	1	2
ENSPPYP00000012307	RRM_1	PF00076.22	7.5e-33	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPPYT00000012788	-	5177	-	ENSPPYP00000012307	344 (aa)	-	H2P1Y9

Gene Model

Click here to download ENSPPYG00000011019's gene model file

Pathways

Pathway ID	Pathway Name	Source
pon03040	Spliceosome	KEGG
pon05168	Herpes simplex virus 1 infection	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPPYG00000011019's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPPYG00000011019	SRSF6	58	40.670	ENSPPYG00000008240	SRSF1	78	41.627
ENSPPYG00000011019	SRSF6	52	65.363	ENSPPYG00000005945	SRSF5	66	64.130

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPPYG00000011019	SRSF6	100	100.000	ENSG00000124193	SRSF6	100	100.000	Homo_sapiens
ENSPPYG00000011019	SRSF6	94	85.846	ENSAMEG00000003710	SRSF6	94	85.583	Ailuropoda_melanoleuca
ENSPPYG00000011019	SRSF6	86	68.581	ENSACIG00000023658	-	56	87.778	Amphilophus_citrinellus
ENSPPYG00000011019	SRSF6	97	60.290	ENSACIG00000020091	-	95	80.315	Amphilophus_citrinellus
ENSPPYG00000011019	SRSF6	53	85.246	ENSAOCG00000004309	-	57	83.152	Amphiprion_ocellaris
ENSPPYG00000011019	SRSF6	53	88.649	ENSAPEG00000013086	-	53	88.172	Amphiprion_percula
ENSPPYG00000011019	SRSF6	66	71.179	ENSAPEG00000020746	-	66	79.787	Amphiprion_percula
ENSPPYG00000011019	SRSF6	53	82.967	ENSATEG00000007255	-	71	80.000	Anabas_testudineus
ENSPPYG00000011019	SRSF6	94	82.407	ENSACAG00000002061	SRSF6	93	84.923	Anolis_carolinensis
ENSPPYG00000011019	SRSF6	100	99.128	ENSANAG00000024080	SRSF6	100	99.128	Aotus_nancymaae
ENSPPYG00000011019	SRSF6	53	83.333	ENSAMXG00000042692	-	96	78.519	Astyanax_mexicanus
ENSPPYG00000011019	SRSF6	100	97.110	ENSBTAG00000008527	SRSF6	100	97.110	Bos_taurus
ENSPPYG00000011019	SRSF6	78	100.000	ENSCJAG00000048403	SRSF6	99	100.000	Callithrix_jacchus
ENSPPYG00000011019	SRSF6	100	97.399	ENSCAFG00000009289	SRSF6	100	97.399	Canis_familiaris
ENSPPYG00000011019	SRSF6	100	97.399	ENSCAFG00020013559	SRSF6	100	97.399	Canis_lupus_dingo
ENSPPYG00000011019	SRSF6	100	97.110	ENSCHIG00000009148	-	100	97.110	Capra_hircus
ENSPPYG00000011019	SRSF6	100	97.688	ENSCHIG00000015890	-	100	97.688	Capra_hircus
ENSPPYG00000011019	SRSF6	100	82.948	ENSTSYG00000026476	SRSF6	100	82.948	Carlito_syrichta
ENSPPYG00000011019	SRSF6	94	80.864	ENSCPOG00000011761	SRSF6	98	68.613	Cavia_porcellus
ENSPPYG00000011019	SRSF6	94	71.914	ENSCCAG00000018540	-	62	87.766	Cebus_capucinus
ENSPPYG00000011019	SRSF6	100	99.419	ENSCCAG00000026018	-	100	99.419	Cebus_capucinus
ENSPPYG00000011019	SRSF6	100	99.419	ENSCATG00000030794	SRSF6	100	99.419	Cercocebus_atys
ENSPPYG00000011019	SRSF6	100	96.821	ENSCLAG00000010247	SRSF6	100	96.821	Chinchilla_lanigera
ENSPPYG00000011019	SRSF6	100	99.419	ENSCSAG00000014022	SRSF6	100	99.419	Chlorocebus_sabaeus
ENSPPYG00000011019	SRSF6	100	83.237	ENSCHOG00000000561	SRSF6	77	100.000	Choloepus_hoffmanni
ENSPPYG00000011019	SRSF6	54	92.553	ENSCPBG00000018200	SRSF6	94	85.061	Chrysemys_picta_bellii
ENSPPYG00000011019	SRSF6	100	99.128	ENSCANG00000037774	-	100	99.128	Colobus_angolensis_palliatus
ENSPPYG00000011019	SRSF6	100	84.884	ENSCANG00000042529	-	100	84.884	Colobus_angolensis_palliatus
ENSPPYG00000011019	SRSF6	100	96.802	ENSCGRG00001022339	Srsf6	100	96.802	Cricetulus_griseus_chok1gshd
ENSPPYG00000011019	SRSF6	63	95.814	ENSCGRG00000006618	Srsf6	100	95.814	Cricetulus_griseus_crigri
ENSPPYG00000011019	SRSF6	53	83.957	ENSDARG00000016783	srsf6b	82	91.026	Danio_rerio
ENSPPYG00000011019	SRSF6	94	95.988	ENSDNOG00000008410	SRSF6	94	95.988	Dasypus_novemcinctus
ENSPPYG00000011019	SRSF6	100	98.266	ENSDORG00000028378	Srsf6	100	98.266	Dipodomys_ordii
ENSPPYG00000011019	SRSF6	92	92.812	ENSETEG00000006221	SRSF6	94	90.154	Echinops_telfairi
ENSPPYG00000011019	SRSF6	100	96.821	ENSEASG00005023429	SRSF6	100	96.821	Equus_asinus_asinus
ENSPPYG00000011019	SRSF6	100	96.821	ENSECAG00000023932	SRSF6	100	96.821	Equus_caballus
ENSPPYG00000011019	SRSF6	56	93.846	ENSEEUG00000002324	SRSF6	90	93.939	Erinaceus_europaeus
ENSPPYG00000011019	SRSF6	53	84.530	ENSELUG00000013506	SRSF6	70	88.462	Esox_lucius
ENSPPYG00000011019	SRSF6	53	86.022	ENSELUG00000024182	SRSF6	90	78.049	Esox_lucius
ENSPPYG00000011019	SRSF6	100	97.399	ENSFCAG00000032814	SRSF6	100	97.399	Felis_catus
ENSPPYG00000011019	SRSF6	94	81.790	ENSFDAG00000012191	SRSF6	94	78.769	Fukomys_damarensis
ENSPPYG00000011019	SRSF6	87	71.148	ENSFHEG00000023065	srsf6a	55	87.500	Fundulus_heteroclitus
ENSPPYG00000011019	SRSF6	52	72.067	ENSGMOG00000006105	srsf6a	62	70.391	Gadus_morhua
ENSPPYG00000011019	SRSF6	53	83.425	ENSGMOG00000014458	srsf6a	52	78.646	Gadus_morhua
ENSPPYG00000011019	SRSF6	92	82.515	ENSGALG00000000990	SRSF6	94	83.686	Gallus_gallus
ENSPPYG00000011019	SRSF6	87	59.226	ENSGACG00000006084	srsf6a	53	83.871	Gasterosteus_aculeatus
ENSPPYG00000011019	SRSF6	54	92.553	ENSGAGG00000003238	SRSF6	94	85.061	Gopherus_agassizii
ENSPPYG00000011019	SRSF6	100	100.000	ENSGGOG00000009808	SRSF6	100	100.000	Gorilla_gorilla
ENSPPYG00000011019	SRSF6	73	61.333	ENSHBUG00000006386	-	58	83.696	Haplochromis_burtoni
ENSPPYG00000011019	SRSF6	100	96.821	ENSHGLG00000007348	SRSF6	100	96.821	Heterocephalus_glaber_female
ENSPPYG00000011019	SRSF6	90	76.038	ENSHGLG00000007701	-	58	79.144	Heterocephalus_glaber_female
ENSPPYG00000011019	SRSF6	94	82.099	ENSHGLG00100005043	SRSF6	94	79.077	Heterocephalus_glaber_male
ENSPPYG00000011019	SRSF6	53	83.607	ENSHCOG00000002740	srsf6a	57	83.152	Hippocampus_comes
ENSPPYG00000011019	SRSF6	53	86.957	ENSIPUG00000004776	-	72	72.103	Ictalurus_punctatus
ENSPPYG00000011019	SRSF6	100	98.837	ENSSTOG00000010866	SRSF6	100	98.837	Ictidomys_tridecemlineatus
ENSPPYG00000011019	SRSF6	56	96.335	ENSJJAG00000020690	Srsf6	91	96.373	Jaculus_jaculus
ENSPPYG00000011019	SRSF6	53	84.783	ENSLBEG00000007356	srsf6a	52	85.484	Labrus_bergylta
ENSPPYG00000011019	SRSF6	89	82.903	ENSLACG00000005466	SRSF6	54	91.848	Latimeria_chalumnae
ENSPPYG00000011019	SRSF6	69	95.816	ENSLAFG00000006682	SRSF6	89	95.652	Loxodonta_africana
ENSPPYG00000011019	SRSF6	100	99.419	ENSMFAG00000036925	SRSF6	100	99.419	Macaca_fascicularis
ENSPPYG00000011019	SRSF6	100	99.419	ENSMMUG00000006742	SRSF6	100	99.419	Macaca_mulatta
ENSPPYG00000011019	SRSF6	100	97.965	ENSMNEG00000038270	-	100	97.965	Macaca_nemestrina
ENSPPYG00000011019	SRSF6	100	98.837	ENSMNEG00000027392	-	100	98.837	Macaca_nemestrina
ENSPPYG00000011019	SRSF6	63	99.070	ENSMLEG00000031524	SRSF6	100	99.070	Mandrillus_leucophaeus
ENSPPYG00000011019	SRSF6	53	88.108	ENSMAMG00000017161	srsf6a	53	87.634	Mastacembelus_armatus
ENSPPYG00000011019	SRSF6	63	71.861	ENSMZEG00005008032	-	57	83.696	Maylandia_zebra
ENSPPYG00000011019	SRSF6	100	97.977	ENSMICG00000008537	SRSF6	100	97.977	Microcebus_murinus
ENSPPYG00000011019	SRSF6	63	95.814	ENSMOCG00000018738	Srsf6	100	95.814	Microtus_ochrogaster
ENSPPYG00000011019	SRSF6	54	95.699	ENSMODG00000003107	SRSF6	95	91.104	Monodelphis_domestica
ENSPPYG00000011019	SRSF6	100	95.930	MGP_CAROLIEiJ_G0024606	Srsf6	100	95.930	Mus_caroli
ENSPPYG00000011019	SRSF6	100	96.221	ENSMUSG00000016921	Srsf6	100	96.221	Mus_musculus
ENSPPYG00000011019	SRSF6	100	95.930	MGP_PahariEiJ_G0026050	Srsf6	100	95.930	Mus_pahari
ENSPPYG00000011019	SRSF6	100	96.221	MGP_SPRETEiJ_G0025528	Srsf6	100	96.221	Mus_spretus
ENSPPYG00000011019	SRSF6	83	97.569	ENSMPUG00000017692	SRSF6	99	97.569	Mustela_putorius_furo
ENSPPYG00000011019	SRSF6	93	80.745	ENSMLUG00000016618	SRSF6	94	80.615	Myotis_lucifugus
ENSPPYG00000011019	SRSF6	100	96.221	ENSNGAG00000017560	Srsf6	100	96.221	Nannospalax_galili
ENSPPYG00000011019	SRSF6	53	88.525	ENSNBRG00000001846	-	52	87.634	Neolamprologus_brichardi
ENSPPYG00000011019	SRSF6	53	82.514	ENSNBRG00000014709	-	58	83.696	Neolamprologus_brichardi
ENSPPYG00000011019	SRSF6	100	100.000	ENSNLEG00000006524	SRSF6	100	100.000	Nomascus_leucogenys
ENSPPYG00000011019	SRSF6	54	95.699	ENSMEUG00000014615	SRSF6	99	92.787	Notamacropus_eugenii
ENSPPYG00000011019	SRSF6	75	96.923	ENSOPRG00000002017	-	100	96.923	Ochotona_princeps
ENSPPYG00000011019	SRSF6	53	84.153	ENSONIG00000020247	-	53	84.239	Oreochromis_niloticus
ENSPPYG00000011019	SRSF6	74	58.268	ENSOCUG00000023999	-	70	63.687	Oryctolagus_cuniculus
ENSPPYG00000011019	SRSF6	83	80.392	ENSOCUG00000009785	-	98	83.784	Oryctolagus_cuniculus
ENSPPYG00000011019	SRSF6	100	96.532	ENSOGAG00000014468	SRSF6	100	96.532	Otolemur_garnettii
ENSPPYG00000011019	SRSF6	93	93.789	ENSOARG00000003117	SRSF6	94	93.538	Ovis_aries
ENSPPYG00000011019	SRSF6	90	86.084	ENSPPAG00000043131	-	100	88.350	Pan_paniscus
ENSPPYG00000011019	SRSF6	100	99.709	ENSPPAG00000034327	-	100	99.709	Pan_paniscus
ENSPPYG00000011019	SRSF6	100	97.399	ENSPPRG00000008917	SRSF6	100	97.399	Panthera_pardus
ENSPPYG00000011019	SRSF6	63	96.774	ENSPTIG00000019153	SRSF6	100	96.774	Panthera_tigris_altaica
ENSPPYG00000011019	SRSF6	90	86.084	ENSPTRG00000046274	-	100	88.350	Pan_troglodytes
ENSPPYG00000011019	SRSF6	100	99.709	ENSPTRG00000044686	-	100	99.709	Pan_troglodytes
ENSPPYG00000011019	SRSF6	100	99.419	ENSPANG00000035224	SRSF6	100	99.419	Papio_anubis
ENSPPYG00000011019	SRSF6	100	63.143	ENSPKIG00000018463	-	77	92.308	Paramormyrops_kingsleyae
ENSPPYG00000011019	SRSF6	88	71.753	ENSPMGG00000014963	srsf6a	55	89.130	Periophthalmus_magnuspinnatus
ENSPPYG00000011019	SRSF6	94	87.037	ENSPCIG00000003820	SRSF6	95	90.798	Phascolarctos_cinereus
ENSPPYG00000011019	SRSF6	53	87.931	ENSPFOG00000006437	srsf6a	50	83.158	Poecilia_formosa
ENSPPYG00000011019	SRSF6	87	63.208	ENSPLAG00000009243	srsf6a	80	82.677	Poecilia_latipinna
ENSPPYG00000011019	SRSF6	53	85.326	ENSPMEG00000006042	SRSF6	54	87.027	Poecilia_mexicana
ENSPPYG00000011019	SRSF6	54	98.378	ENSPCAG00000010954	SRSF6	96	93.498	Procavia_capensis
ENSPPYG00000011019	SRSF6	100	97.977	ENSPCOG00000026364	SRSF6	100	97.977	Propithecus_coquereli
ENSPPYG00000011019	SRSF6	94	95.963	ENSPVAG00000015232	SRSF6	94	95.666	Pteropus_vampyrus
ENSPPYG00000011019	SRSF6	53	82.514	ENSPNYG00000004944	-	58	83.696	Pundamilia_nyererei
ENSPPYG00000011019	SRSF6	53	88.525	ENSPNYG00000011272	-	51	87.634	Pundamilia_nyererei
ENSPPYG00000011019	SRSF6	100	96.221	ENSRNOG00000006380	Srsf6	100	96.221	Rattus_norvegicus
ENSPPYG00000011019	SRSF6	100	97.674	ENSRBIG00000041414	SRSF6	100	97.674	Rhinopithecus_bieti
ENSPPYG00000011019	SRSF6	100	99.419	ENSRROG00000029989	SRSF6	100	99.419	Rhinopithecus_roxellana
ENSPPYG00000011019	SRSF6	100	99.128	ENSSBOG00000033708	-	100	99.128	Saimiri_boliviensis_boliviensis
ENSPPYG00000011019	SRSF6	94	87.346	ENSSHAG00000012805	SRSF6	95	90.798	Sarcophilus_harrisii
ENSPPYG00000011019	SRSF6	88	64.286	ENSSFOG00015019681	-	53	81.959	Scleropages_formosus
ENSPPYG00000011019	SRSF6	53	80.220	ENSSMAG00000017447	-	55	79.891	Scophthalmus_maximus
ENSPPYG00000011019	SRSF6	53	88.108	ENSSDUG00000016097	srsf6a	53	87.634	Seriola_dumerili
ENSPPYG00000011019	SRSF6	53	88.108	ENSSLDG00000022841	srsf6a	54	87.634	Seriola_lalandi_dorsalis
ENSPPYG00000011019	SRSF6	75	95.769	ENSSARG00000001602	SRSF6	100	95.769	Sorex_araneus
ENSPPYG00000011019	SRSF6	53	95.082	ENSSPUG00000004967	SRSF6	94	87.307	Sphenodon_punctatus
ENSPPYG00000011019	SRSF6	75	70.566	ENSSPAG00000002362	srsf6a	67	86.243	Stegastes_partitus
ENSPPYG00000011019	SRSF6	100	96.821	ENSSSCG00000007362	SRSF6	100	96.821	Sus_scrofa
ENSPPYG00000011019	SRSF6	92	84.520	ENSTGUG00000003455	SRSF6	94	85.061	Taeniopygia_guttata
ENSPPYG00000011019	SRSF6	87	71.096	ENSTNIG00000001692	srsf6a	57	86.022	Tetraodon_nigroviridis
ENSPPYG00000011019	SRSF6	84	94.483	ENSTBEG00000013448	SRSF6	93	94.483	Tupaia_belangeri
ENSPPYG00000011019	SRSF6	75	96.154	ENSTTRG00000015410	SRSF6	100	96.154	Tursiops_truncatus
ENSPPYG00000011019	SRSF6	100	97.399	ENSUAMG00000003559	SRSF6	100	97.399	Ursus_americanus
ENSPPYG00000011019	SRSF6	63	96.774	ENSUMAG00000001154	SRSF6	100	96.774	Ursus_maritimus
ENSPPYG00000011019	SRSF6	75	100.000	ENSVPAG00000003016	SRSF6	74	100.000	Vicugna_pacos
ENSPPYG00000011019	SRSF6	53	86.885	ENSXMAG00000021849	srsf6a	55	86.413	Xiphophorus_maculatus