EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSPPYG00000011042 (Gene tree)
Gene ID
-
Gene Symbol
PABPC1L
Alias
C20orf119|PABPC1L1|dJ1069P2.3|ePAB
Full Name
poly(A) binding protein cytoplasmic 1 like
Gene Type
protein_coding
Species
Pongo_abelii
Status
putative
Strand
Plus strand
Length
28547 bases
Position
chr20:42400974-42429520
Accession
100438350
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSPPYP00000012332PABPPF00658.186.6e-2811
ENSPPYP00000012332RRM_5PF13893.66.4e-1011
ENSPPYP00000012332RRM_1PF00076.223.8e-9014
ENSPPYP00000012332RRM_1PF00076.223.8e-9024
ENSPPYP00000012332RRM_1PF00076.223.8e-9034
ENSPPYP00000012332RRM_1PF00076.223.8e-9044
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSPPYT00000012814PABPC1L-2012294-ENSPPYP00000012332614 (aa)XP_024094504A0A2J8XVV5
Gene Model
Click here to download ENSPPYG00000011042's gene model file
Pathways
Pathway IDPathway NameSource
pon03013RNA transportKEGG
pon03015mRNA surveillance pathwayKEGG
pon03018RNA degradationKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSPPYG00000011042's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSPPYG00000011042PABPC1L5731.410ENSPPYG00000017853-9031.410
ENSPPYG00000011042PABPC1L6159.551ENSPPYG00000020526PABPC59659.504
ENSPPYG00000011042PABPC1L10066.455ENSPPYG00000005219PABPC39867.042
ENSPPYG00000011042PABPC1L10068.720ENSPPYG00000018790PABPC19968.680
ENSPPYG00000011042PABPC1L9964.724ENSPPYG00000001506PABPC49863.902
ENSPPYG00000011042PABPC1L5631.098ENSPPYG00000015814HNRNPA05032.051
ENSPPYG00000011042PABPC1L7054.355ENSPPYG00000012833-9854.355
ENSPPYG00000011042PABPC1L6130.263ENSPPYG00000001367ELAVL48733.735
ENSPPYG00000011042PABPC1L6071.066ENSPPYG00000020468-9971.066
ENSPPYG00000011042PABPC1L5832.051ENSPPYG00000012326TIA17330.114
ENSPPYG00000011042PABPC1L6034.940ENSPPYG00000019166ELAVL28534.940
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSPPYG00000011042PABPC1L10099.186ENSG00000101104PABPC1L10099.186Homo_sapiens
ENSPPYG00000011042PABPC1L9966.561ENSAPOG00000010842pabpc1l9966.507Acanthochromis_polyacanthus
ENSPPYG00000011042PABPC1L9978.438ENSAMEG00000004099PABPC1L10078.750Ailuropoda_melanoleuca
ENSPPYG00000011042PABPC1L9968.109ENSACIG00000021004-9971.807Amphilophus_citrinellus
ENSPPYG00000011042PABPC1L9966.354ENSAOCG00000006167-9966.509Amphiprion_ocellaris
ENSPPYG00000011042PABPC1L9972.902ENSAPEG00000010558-9780.693Amphiprion_percula
ENSPPYG00000011042PABPC1L9969.305ENSATEG00000007428pabpc1l9969.305Anabas_testudineus
ENSPPYG00000011042PABPC1L9774.272ENSAPLG00000008415PABPC1L9874.355Anas_platyrhynchos
ENSPPYG00000011042PABPC1L9974.639ENSACAG00000011841PABPC1L9874.639Anolis_carolinensis
ENSPPYG00000011042PABPC1L10096.417ENSANAG00000026826PABPC1L10096.417Aotus_nancymaae
ENSPPYG00000011042PABPC1L9968.051ENSACLG00000024791pabpc1l9968.051Astatotilapia_calliptera
ENSPPYG00000011042PABPC1L9970.767ENSAMXG00000013552pabpc1l9970.080Astyanax_mexicanus
ENSPPYG00000011042PABPC1L5996.429ENSBTAG00000055300-10096.429Bos_taurus
ENSPPYG00000011042PABPC1L6678.495ENSBTAG00000016849PABPC1L8578.495Bos_taurus
ENSPPYG00000011042PABPC1L10096.906ENSCJAG00000017628PABPC1L10096.906Callithrix_jacchus
ENSPPYG00000011042PABPC1L6076.437ENSCJAG00000038506-10076.437Callithrix_jacchus
ENSPPYG00000011042PABPC1L9975.307ENSCAFG00000009573PABPC1L10074.847Canis_familiaris
ENSPPYG00000011042PABPC1L9988.091ENSCAFG00020013828PABPC1L9988.091Canis_lupus_dingo
ENSPPYG00000011042PABPC1L9787.291ENSCHIG00000025759PABPC1L9187.291Capra_hircus
ENSPPYG00000011042PABPC1L10088.274ENSTSYG00000006645PABPC1L10088.274Carlito_syrichta
ENSPPYG00000011042PABPC1L9980.692ENSCAPG00000014519PABPC1L10080.692Cavia_aperea
ENSPPYG00000011042PABPC1L10083.871ENSCPOG00000013633PABPC1L10083.871Cavia_porcellus
ENSPPYG00000011042PABPC1L10095.928ENSCCAG00000023338PABPC1L10095.928Cebus_capucinus
ENSPPYG00000011042PABPC1L10098.534ENSCATG00000034065PABPC1L10098.534Cercocebus_atys
ENSPPYG00000011042PABPC1L10081.774ENSCLAG00000005298PABPC1L10083.065Chinchilla_lanigera
ENSPPYG00000011042PABPC1L10098.371ENSCSAG00000014242PABPC1L10098.371Chlorocebus_sabaeus
ENSPPYG00000011042PABPC1L7281.757ENSCPBG00000017755-9981.757Chrysemys_picta_bellii
ENSPPYG00000011042PABPC1L5478.788ENSCPBG00000007810-8178.788Chrysemys_picta_bellii
ENSPPYG00000011042PABPC1L9750.610ENSCING00000002796-9749.187Ciona_intestinalis
ENSPPYG00000011042PABPC1L9859.807ENSCSAVG00000004246-8978.313Ciona_savignyi
ENSPPYG00000011042PABPC1L9757.333ENSCSAVG00000003102-10081.507Ciona_savignyi
ENSPPYG00000011042PABPC1L10093.579ENSCANG00000037530PABPC1L10093.579Colobus_angolensis_palliatus
ENSPPYG00000011042PABPC1L9976.948ENSCGRG00001021938Pabpc1l9976.948Cricetulus_griseus_chok1gshd
ENSPPYG00000011042PABPC1L9976.948ENSCGRG00000007946Pabpc1l9976.948Cricetulus_griseus_crigri
ENSPPYG00000011042PABPC1L9865.563ENSCSEG00000021295pabpc1l9965.563Cynoglossus_semilaevis
ENSPPYG00000011042PABPC1L9969.677ENSCVAG00000015943-8685.496Cyprinodon_variegatus
ENSPPYG00000011042PABPC1L9970.465ENSDARG00000002597pabpc1l8886.154Danio_rerio
ENSPPYG00000011042PABPC1L9990.049ENSDNOG00000048450PABPC1L9990.049Dasypus_novemcinctus
ENSPPYG00000011042PABPC1L10085.993ENSDORG00000001067Pabpc1l10085.993Dipodomys_ordii
ENSPPYG00000011042PABPC1L9690.650ENSETEG00000009969PABPC1L7390.650Echinops_telfairi
ENSPPYG00000011042PABPC1L5995.238ENSEASG00005023408-10095.238Equus_asinus_asinus
ENSPPYG00000011042PABPC1L5188.485ENSEASG00005023407-6788.485Equus_asinus_asinus
ENSPPYG00000011042PABPC1L6786.522ENSECAG00000040139-8286.522Equus_caballus
ENSPPYG00000011042PABPC1L10083.225ENSEEUG00000005978PABPC1L10083.225Erinaceus_europaeus
ENSPPYG00000011042PABPC1L9970.382ENSELUG00000001811pabpc1l9969.537Esox_lucius
ENSPPYG00000011042PABPC1L9988.581ENSFCAG00000011692PABPC1L9988.581Felis_catus
ENSPPYG00000011042PABPC1L8874.770ENSFALG00000005372PABPC1L9074.770Ficedula_albicollis
ENSPPYG00000011042PABPC1L10082.439ENSFDAG00000008291PABPC1L10082.114Fukomys_damarensis
ENSPPYG00000011042PABPC1L9969.181ENSFHEG00000003398pabpc1l9968.921Fundulus_heteroclitus
ENSPPYG00000011042PABPC1L9968.506ENSGMOG00000004437pabpc1l9868.506Gadus_morhua
ENSPPYG00000011042PABPC1L9771.134ENSGALG00000004123PABPC1L9983.213Gallus_gallus
ENSPPYG00000011042PABPC1L9966.154ENSGAFG00000021057pabpc1l9965.794Gambusia_affinis
ENSPPYG00000011042PABPC1L9967.464ENSGACG00000002792pabpc1l9966.826Gasterosteus_aculeatus
ENSPPYG00000011042PABPC1L9975.884ENSGAGG00000000589PABPC1L9087.500Gopherus_agassizii
ENSPPYG00000011042PABPC1L10099.186ENSGGOG00000004584PABPC1L10099.186Gorilla_gorilla
ENSPPYG00000011042PABPC1L9967.891ENSHBUG00000006134pabpc1l9967.891Haplochromis_burtoni
ENSPPYG00000011042PABPC1L10083.871ENSHGLG00000008434PABPC1L10083.871Heterocephalus_glaber_female
ENSPPYG00000011042PABPC1L10083.871ENSHGLG00100012151PABPC1L10083.871Heterocephalus_glaber_male
ENSPPYG00000011042PABPC1L5981.461ENSHGLG00100019506-10081.461Heterocephalus_glaber_male
ENSPPYG00000011042PABPC1L9967.822ENSHCOG00000009270pabpc1l9967.617Hippocampus_comes
ENSPPYG00000011042PABPC1L5364.615ENSIPUG00000005537-10064.615Ictalurus_punctatus
ENSPPYG00000011042PABPC1L6062.069ENSIPUG00000006780-8562.069Ictalurus_punctatus
ENSPPYG00000011042PABPC1L9971.406ENSIPUG00000012602pabpc1l9971.200Ictalurus_punctatus
ENSPPYG00000011042PABPC1L5961.494ENSIPUG00000006760-8861.494Ictalurus_punctatus
ENSPPYG00000011042PABPC1L10088.436ENSSTOG00000003739PABPC1L10088.436Ictidomys_tridecemlineatus
ENSPPYG00000011042PABPC1L9968.364ENSJJAG00000022406Pabpc1l9964.448Jaculus_jaculus
ENSPPYG00000011042PABPC1L9969.467ENSKMAG00000016847pabpc1l9969.368Kryptolebias_marmoratus
ENSPPYG00000011042PABPC1L9967.192ENSLBEG00000010084pabpc1l9966.877Labrus_bergylta
ENSPPYG00000011042PABPC1L9969.952ENSLACG00000005762PABPC1L9971.324Latimeria_chalumnae
ENSPPYG00000011042PABPC1L9970.560ENSLOCG00000007519pabpc1l9870.513Lepisosteus_oculatus
ENSPPYG00000011042PABPC1L9984.936ENSLAFG00000003553PABPC1L10084.936Loxodonta_africana
ENSPPYG00000011042PABPC1L10098.697ENSMFAG00000040365PABPC1L10098.697Macaca_fascicularis
ENSPPYG00000011042PABPC1L10095.786ENSMNEG00000032298PABPC1L10095.786Macaca_nemestrina
ENSPPYG00000011042PABPC1L10098.534ENSMLEG00000043139PABPC1L10098.534Mandrillus_leucophaeus
ENSPPYG00000011042PABPC1L9768.197ENSMAMG00000011854pabpc1l9768.144Mastacembelus_armatus
ENSPPYG00000011042PABPC1L9968.051ENSMZEG00005023713pabpc1l9968.051Maylandia_zebra
ENSPPYG00000011042PABPC1L9975.684ENSMGAG00000003674PABPC1L9875.684Meleagris_gallopavo
ENSPPYG00000011042PABPC1L9975.162ENSMOCG00000013186Pabpc1l9975.162Microtus_ochrogaster
ENSPPYG00000011042PABPC1L9968.167ENSMMOG00000020574-9086.154Mola_mola
ENSPPYG00000011042PABPC1L9779.667ENSMODG00000016198PABPC1L9979.500Monodelphis_domestica
ENSPPYG00000011042PABPC1L9766.613ENSMALG00000021622pabpc1l10066.396Monopterus_albus
ENSPPYG00000011042PABPC1L9977.288MGP_CAROLIEiJ_G0024627Pabpc1l9977.288Mus_caroli
ENSPPYG00000011042PABPC1L9977.124ENSMUSG00000054582Pabpc1l9977.124Mus_musculus
ENSPPYG00000011042PABPC1L9977.162MGP_PahariEiJ_G0026071Pabpc1l9977.162Mus_pahari
ENSPPYG00000011042PABPC1L9977.288MGP_SPRETEiJ_G0025549Pabpc1l9977.288Mus_spretus
ENSPPYG00000011042PABPC1L9986.364ENSMPUG00000017646PABPC1L9986.364Mustela_putorius_furo
ENSPPYG00000011042PABPC1L9879.194ENSMLUG00000006324PABPC1L9779.194Myotis_lucifugus
ENSPPYG00000011042PABPC1L10079.483ENSNGAG00000010458Pabpc1l10079.483Nannospalax_galili
ENSPPYG00000011042PABPC1L9772.662ENSNBRG00000016633pabpc1l9979.310Neolamprologus_brichardi
ENSPPYG00000011042PABPC1L10068.404ENSMEUG00000007905-10068.404Notamacropus_eugenii
ENSPPYG00000011042PABPC1L10086.829ENSOPRG00000011846PABPC1L10086.829Ochotona_princeps
ENSPPYG00000011042PABPC1L5874.375ENSODEG00000002920-9774.375Octodon_degus
ENSPPYG00000011042PABPC1L10076.547ENSODEG00000015482PABPC1L10076.547Octodon_degus
ENSPPYG00000011042PABPC1L9968.051ENSONIG00000017314pabpc1l9968.051Oreochromis_niloticus
ENSPPYG00000011042PABPC1L8968.174ENSOANG00000015793-10068.174Ornithorhynchus_anatinus
ENSPPYG00000011042PABPC1L9980.556ENSOCUG00000003005PABPC1L10080.556Oryctolagus_cuniculus
ENSPPYG00000011042PABPC1L9772.662ENSORLG00000010322pabpc1l9972.662Oryzias_latipes
ENSPPYG00000011042PABPC1L9772.662ENSORLG00020021193pabpc1l9972.662Oryzias_latipes_hni
ENSPPYG00000011042PABPC1L9772.662ENSORLG00015017018pabpc1l9972.662Oryzias_latipes_hsok
ENSPPYG00000011042PABPC1L9964.438ENSOMEG00000010789pabpc1l9964.231Oryzias_melastigma
ENSPPYG00000011042PABPC1L9987.340ENSOGAG00000032999PABPC1L10087.340Otolemur_garnettii
ENSPPYG00000011042PABPC1L9987.849ENSOARG00000004578PABPC1L9987.849Ovis_aries
ENSPPYG00000011042PABPC1L10099.023ENSPPAG00000039677PABPC1L10099.023Pan_paniscus
ENSPPYG00000011042PABPC1L6381.790ENSPPRG00000019327-9881.790Panthera_pardus
ENSPPYG00000011042PABPC1L9888.907ENSPTIG00000006524PABPC1L9988.907Panthera_tigris_altaica
ENSPPYG00000011042PABPC1L6399.691ENSPTRG00000013531PABPC1L9999.691Pan_troglodytes
ENSPPYG00000011042PABPC1L10098.534ENSPANG00000018788PABPC1L10098.534Papio_anubis
ENSPPYG00000011042PABPC1L9971.222ENSPKIG00000007322pabpc1l9970.692Paramormyrops_kingsleyae
ENSPPYG00000011042PABPC1L5382.308ENSPKIG00000016810-9382.308Paramormyrops_kingsleyae
ENSPPYG00000011042PABPC1L6883.453ENSPSIG00000013289PABPC1L9983.453Pelodiscus_sinensis
ENSPPYG00000011042PABPC1L7267.337ENSPMGG00000023121-9068.912Periophthalmus_magnuspinnatus
ENSPPYG00000011042PABPC1L6178.605ENSPMGG00000023117pabpc1l9286.364Periophthalmus_magnuspinnatus
ENSPPYG00000011042PABPC1L9976.961ENSPEMG00000020671Pabpc1l9977.124Peromyscus_maniculatus_bairdii
ENSPPYG00000011042PABPC1L9969.692ENSPFOG00000013241pabpc1l9969.044Poecilia_formosa
ENSPPYG00000011042PABPC1L9969.256ENSPLAG00000017490-9969.206Poecilia_latipinna
ENSPPYG00000011042PABPC1L5386.260ENSPLAG00000023686-9286.260Poecilia_latipinna
ENSPPYG00000011042PABPC1L9968.530ENSPMEG00000007677pabpc1l9968.160Poecilia_mexicana
ENSPPYG00000011042PABPC1L5386.260ENSPMEG00000009185-8986.260Poecilia_mexicana
ENSPPYG00000011042PABPC1L6776.755ENSPREG00000015886pabpc1l9976.755Poecilia_reticulata
ENSPPYG00000011042PABPC1L6293.750ENSPCAG00000011787-7593.750Procavia_capensis
ENSPPYG00000011042PABPC1L9989.786ENSPCOG00000020630PABPC1L9989.786Propithecus_coquereli
ENSPPYG00000011042PABPC1L9985.318ENSPVAG00000012663PABPC1L10085.318Pteropus_vampyrus
ENSPPYG00000011042PABPC1L9772.662ENSPNYG00000004101pabpc1l9979.310Pundamilia_nyererei
ENSPPYG00000011042PABPC1L9964.000ENSPNAG00000021248pabpc1l9963.462Pygocentrus_nattereri
ENSPPYG00000011042PABPC1L9977.147ENSRNOG00000012750Pabpc1l10077.310Rattus_norvegicus
ENSPPYG00000011042PABPC1L10098.534ENSRBIG00000035381PABPC1L10098.534Rhinopithecus_bieti
ENSPPYG00000011042PABPC1L10098.371ENSRROG00000044498PABPC1L10098.371Rhinopithecus_roxellana
ENSPPYG00000011042PABPC1L10095.928ENSSBOG00000009532-10095.928Saimiri_boliviensis_boliviensis
ENSPPYG00000011042PABPC1L9774.029ENSSHAG00000011446PABPC1L10074.029Sarcophilus_harrisii
ENSPPYG00000011042PABPC1L9971.635ENSSFOG00015017304pabpc1l9971.108Scleropages_formosus
ENSPPYG00000011042PABPC1L9968.203ENSSMAG00000010516pabpc1l9887.597Scophthalmus_maximus
ENSPPYG00000011042PABPC1L9968.621ENSSDUG00000014743pabpc1l9968.621Seriola_dumerili
ENSPPYG00000011042PABPC1L9873.621ENSSLDG00000006981pabpc1l9876.712Seriola_lalandi_dorsalis
ENSPPYG00000011042PABPC1L9973.676ENSSPUG00000004233PABPC1L9873.676Sphenodon_punctatus
ENSPPYG00000011042PABPC1L9965.568ENSSPAG00000017137pabpc1l9964.250Stegastes_partitus
ENSPPYG00000011042PABPC1L9986.678ENSSSCG00000007382PABPC1L9986.513Sus_scrofa
ENSPPYG00000011042PABPC1L9974.214ENSTGUG00000005114PABPC1L9974.214Taeniopygia_guttata
ENSPPYG00000011042PABPC1L9767.370ENSTRUG00000011085pabpc1l9767.370Takifugu_rubripes
ENSPPYG00000011042PABPC1L10065.823ENSTNIG00000017903pabpc1l9866.294Tetraodon_nigroviridis
ENSPPYG00000011042PABPC1L9494.178ENSTBEG00000002851PABPC1L8094.178Tupaia_belangeri
ENSPPYG00000011042PABPC1L9486.285ENSTTRG00000007618PABPC1L10086.318Tursiops_truncatus
ENSPPYG00000011042PABPC1L9985.667ENSUAMG00000017682PABPC1L9985.667Ursus_americanus
ENSPPYG00000011042PABPC1L6790.515ENSUMAG00000025436PABPC1L9490.515Ursus_maritimus
ENSPPYG00000011042PABPC1L9892.885ENSVVUG00000018939PABPC1L9992.885Vulpes_vulpes
ENSPPYG00000011042PABPC1L9969.872ENSXETG00000022831pabpc1l9869.887Xenopus_tropicalis
ENSPPYG00000011042PABPC1L9772.471ENSXCOG00000005459pabpc1l9982.270Xiphophorus_couchianus
ENSPPYG00000011042PABPC1L9969.579ENSXMAG00000017135pabpc1l9969.206Xiphophorus_maculatus

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